RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 SSSCA1O60232 199 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 NXPH3O95157 252 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 RLN2P04090 185 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 GIPP09681 153 aaPredicted RBP5.05□□□□□ -1.6
PTPRE-209ENST00000487428 IGLL1P15814 213 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 CBLN1P23435 193 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 CRYBB3P26998 211 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 S100A11P31949 105 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 BMI1P35226 326 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 NUP62P37198 522 aaPredicted RBP5.05□□□□□ -1.6
PTPRE-209ENST00000487428 P2RY1P47900 373 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 RND2P52198 227 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 PLP1P60201 277 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 RRAS2P62070 204 aaPredicted RBP5.05□□□□□ -1.6
PTPRE-209ENST00000487428 SELENOTP62341 195 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 DEFA5Q01523 94 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 BAXQ07812 192 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 RAB32Q13637 225 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 ATP6V1FQ16864 119 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 Q56UQ5 140 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 SPANXN5Q5MJ07 72 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 OR8G2PQ6IF36 304 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 ADAMTSL5Q6ZMM2 481 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 OR10P1Q8NGE3 313 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 PPP1R1CQ8WVI7 109 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 SLC35E1Q96K37 410 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 MAGT1Q9H0U3 335 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 NPVFQ9HCQ7 196 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 MRPL36Q9P0J6 103 aaKnown RBP5.05□□□□□ -1.6
PTPRE-209ENST00000487428 GSKIPQ9P0R6 139 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 U3KQE9 123 aa5.05□□□□□ -1.6
PTPRE-209ENST00000487428 IGKV1D-37A0A075B6S9 117 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 IGKV1OR2-108A0A075B7D4 117 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 WI2-2373I1.2A0A1W2PRP0 233 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 A0A1W2PS18 150 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 G3V4G9 280 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 L7N2F9 121 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 GOSR2O14653 212 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 SSNA1O43805 119 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 MPDU1O75352 247 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 MPC2O95563 127 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 IAPPP10997 89 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 FOLR2P14207 255 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 OR10J1P30954 320 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 S100A7P31151 101 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 SULT1A1P50225 295 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 RAP2BP61225 183 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 VAMP2P63027 116 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 HBG1P69891 147 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 HBG2P69892 147 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 FGL1Q08830 312 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 MLANAQ16655 118 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 DEFB114Q30KQ6 69 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 OXLD1Q5BKU9 147 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 PXDC1Q5TGL8 231 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 LCN12Q6JVE5 192 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 TOMM20LQ6UXN7 152 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 UNQ9165/PRO28630Q6UXU0 137 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 TMEM252Q8N6L7 170 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 UXS1Q8NBZ7 420 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 OR51G1Q8NGK1 321 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 NPIPB3Q92617 1050 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 RNF126Q9BV68 326 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 PARD6GQ9BYG4 376 aaPredicted RBP5.04□□□□□ -1.6
PTPRE-209ENST00000487428 SLC25A31Q9H0C2 315 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 MED28Q9H204 178 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 SEPSECSQ9HD40 501 aaKnown RBP5.04□□□□□ -1.6
PTPRE-209ENST00000487428 MGAT4CQ9UBM8 478 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 PFDN2Q9UHV9 154 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 RNF24Q9Y225 148 aa5.04□□□□□ -1.6
PTPRE-209ENST00000487428 TRAV14DV4A0A0A6YYC5 116 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 IGHV7-4-1A0A0J9YVY3 117 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 FAM25EA8MYX2 175 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 H0YIZ8 118 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 TSPAN4O14817 238 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 SAP30O75446 220 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 IGHV3-23P01764 117 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 RD3LP0DJH9 198 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 CXCL3P19876 107 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 C1orf194Q5T5A4 169 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 FAM90A2PQ658T7 463 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 TEPPQ6URK8 271 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 ACOT7LQ6ZUV0 252 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 S100A7AQ86SG5 101 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 HAPLN4Q86UW8 402 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 STX12Q86Y82 276 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 OR11H7Q8NGC8 314 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 Q8WTZ3 238 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 SPAG8Q99932 426 aaPredicted RBP5.03□□□□□ -1.6
PTPRE-209ENST00000487428 TMEM231Q9H6L2 316 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 SMPXQ9UHP9 88 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 ZNF256Q9Y2P7 627 aaPredicted RBP5.03□□□□□ -1.6
PTPRE-209ENST00000487428 PUS1Q9Y606 427 aaKnown RBP eCLIP5.03□□□□□ -1.6
PTPRE-209ENST00000487428 S4R3C0 116 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 PRKDCP78527 4128 aaKnown RBP5.03□□□□□ -1.6
PTPRE-209ENST00000487428 MEGF8Q7Z7M0 2845 aa5.03□□□□□ -1.6
PTPRE-209ENST00000487428 ZNF785A8K8V0 405 aa5.02□□□□□ -1.61
PTPRE-209ENST00000487428 H3BP45 60 aa5.02□□□□□ -1.61
PTPRE-209ENST00000487428 CHEK1O14757 476 aa5.02□□□□□ -1.61
PTPRE-209ENST00000487428 SCGB1D2O95969 90 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms