RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 RPUSD1Q9UJJ7 312 aaKnown RBP12.19□□□□□ -0.46
EPHB4-206ENST00000487222 CLDN16Q9Y5I7 305 aa12.19□□□□□ -0.46
EPHB4-206ENST00000487222 TNFRSF14Q92956 283 aa12.18□□□□□ -0.46
EPHB4-206ENST00000487222 PNRC2Q9NPJ4 139 aaKnown RBP12.18□□□□□ -0.46
EPHB4-206ENST00000487222 CACNA1GO43497 2377 aa12.18□□□□□ -0.46
EPHB4-206ENST00000487222 RNASE1P07998 156 aaKnown RBP12.18□□□□□ -0.46
EPHB4-206ENST00000487222 CD59P13987 128 aa12.18□□□□□ -0.46
EPHB4-206ENST00000487222 RPP25LQ8N5L8 163 aaKnown RBP12.18□□□□□ -0.46
EPHB4-206ENST00000487222 OR4X2Q8NGF9 303 aa12.18□□□□□ -0.46
EPHB4-206ENST00000487222 NXT2Q9NPJ8 142 aaKnown RBP12.18□□□□□ -0.46
EPHB4-206ENST00000487222 AMBPP02760 352 aa12.18□□□□□ -0.46
EPHB4-206ENST00000487222 CLPSP04118 112 aa12.18□□□□□ -0.46
EPHB4-206ENST00000487222 TMEM14EPQ6UXP3 125 aa12.18□□□□□ -0.46
EPHB4-206ENST00000487222 ZNF418Q8TF45 676 aaPredicted RBP12.18□□□□□ -0.46
EPHB4-206ENST00000487222 C2orf88Q9BSF0 95 aa12.18□□□□□ -0.46
EPHB4-206ENST00000487222 CHCHD1Q96BP2 118 aaKnown RBP12.18□□□□□ -0.46
EPHB4-206ENST00000487222 KLHDC3Q9BQ90 382 aa12.18□□□□□ -0.46
EPHB4-206ENST00000487222 HAX1O00165 279 aa12.17□□□□□ -0.46
EPHB4-206ENST00000487222 QRFPP83859 136 aa12.17□□□□□ -0.46
EPHB4-206ENST00000487222 TMEM101Q96IK0 257 aa12.17□□□□□ -0.46
EPHB4-206ENST00000487222 H3BRM9 83 aa12.17□□□□□ -0.46
EPHB4-206ENST00000487222 TMEM42Q69YG0 159 aa12.17□□□□□ -0.46
EPHB4-206ENST00000487222 FAM71F2Q6NXP2 309 aa12.17□□□□□ -0.46
EPHB4-206ENST00000487222 OR13C6PQ8NH95 151 aa12.17□□□□□ -0.46
EPHB4-206ENST00000487222 H3BUT2 72 aa12.17□□□□□ -0.46
EPHB4-206ENST00000487222 NDUFA3O95167 84 aa12.17□□□□□ -0.46
EPHB4-206ENST00000487222 APOMO95445 188 aa12.17□□□□□ -0.46
EPHB4-206ENST00000487222 IGKV1-5P01602 117 aa12.17□□□□□ -0.46
EPHB4-206ENST00000487222 TMEM190Q8WZ59 177 aa12.17□□□□□ -0.46
EPHB4-206ENST00000487222 RNASE6Q93091 150 aaKnown RBP12.17□□□□□ -0.46
EPHB4-206ENST00000487222 RNASE4P34096 147 aaKnown RBP12.17□□□□□ -0.46
EPHB4-206ENST00000487222 C8orf46Q8TAG6 207 aa12.17□□□□□ -0.46
EPHB4-206ENST00000487222 IGHV1-46P01743 117 aa12.16□□□□□ -0.46
EPHB4-206ENST00000487222 LINC01551Q86U37 167 aa12.16□□□□□ -0.46
EPHB4-206ENST00000487222 A0A1B0GV72 72 aa12.16□□□□□ -0.46
EPHB4-206ENST00000487222 PSPNO60542 156 aa12.16□□□□□ -0.46
EPHB4-206ENST00000487222 GFI1BQ5VTD9 330 aa12.16□□□□□ -0.46
EPHB4-206ENST00000487222 NBASA2RRP1 2371 aa12.16□□□□□ -0.46
EPHB4-206ENST00000487222 ANK1P16157 1881 aa12.16□□□□□ -0.46
EPHB4-206ENST00000487222 TRBV6-6A0A0A6YYG2 114 aa12.16□□□□□ -0.46
EPHB4-206ENST00000487222 ZNF124Q15973 351 aa12.16□□□□□ -0.46
EPHB4-206ENST00000487222 ZCCHC24Q8N2G6 241 aaKnown RBP12.16□□□□□ -0.46
EPHB4-206ENST00000487222 GBF1Q92538 1859 aa12.16□□□□□ -0.46
EPHB4-206ENST00000487222 OR5AN1Q8NGI8 311 aa12.16□□□□□ -0.46
EPHB4-206ENST00000487222 FAM168AQ92567 244 aa12.16□□□□□ -0.46
EPHB4-206ENST00000487222 DUX3Q96PT4 197 aa12.16□□□□□ -0.46
EPHB4-206ENST00000487222 POLEQ07864 2286 aa12.16□□□□□ -0.46
EPHB4-206ENST00000487222 COQ2Q96H96 371 aa12.15□□□□□ -0.46
EPHB4-206ENST00000487222 OR10W1Q8NGF6 305 aa12.15□□□□□ -0.46
EPHB4-206ENST00000487222 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.15□□□□□ -0.46
EPHB4-206ENST00000487222 CA1P00915 261 aaPredicted RBP12.15□□□□□ -0.46
EPHB4-206ENST00000487222 NUDT10Q8NFP7 164 aa12.15□□□□□ -0.46
EPHB4-206ENST00000487222 NUDT11Q96G61 164 aa12.15□□□□□ -0.46
EPHB4-206ENST00000487222 AGMATQ9BSE5 352 aa12.15□□□□□ -0.46
EPHB4-206ENST00000487222 C7orf69Q9H7B7 122 aa12.15□□□□□ -0.46
EPHB4-206ENST00000487222 TNFSF13O75888 250 aa12.15□□□□□ -0.46
EPHB4-206ENST00000487222 DPM2O94777 84 aa12.15□□□□□ -0.46
EPHB4-206ENST00000487222 SRSF1Q07955 248 aaKnown RBP eCLIP12.15□□□□□ -0.46
EPHB4-206ENST00000487222 IGHV3-11P01762 117 aa12.14□□□□□ -0.47
EPHB4-206ENST00000487222 SPTAN1Q13813 2472 aaKnown RBP12.14□□□□□ -0.47
EPHB4-206ENST00000487222 TRAV5A0A0B4J249 113 aa12.14□□□□□ -0.47
EPHB4-206ENST00000487222 C5orf63A6NC05 138 aa12.14□□□□□ -0.47
EPHB4-206ENST00000487222 LYL1P12980 280 aa12.14□□□□□ -0.47
EPHB4-206ENST00000487222 TRAV21A0A0B4J279 112 aa12.14□□□□□ -0.47
EPHB4-206ENST00000487222 TIMM23O14925 209 aa12.14□□□□□ -0.47
EPHB4-206ENST00000487222 RHOGP84095 191 aa12.14□□□□□ -0.47
EPHB4-206ENST00000487222 HGFACQ04756 655 aa12.14□□□□□ -0.47
EPHB4-206ENST00000487222 ST20Q9HBF5 79 aa12.14□□□□□ -0.47
EPHB4-206ENST00000487222 VCX2Q9H322 139 aa12.14□□□□□ -0.47
EPHB4-206ENST00000487222 TSPAN13O95857 204 aa12.13□□□□□ -0.47
EPHB4-206ENST00000487222 TYMSP04818 313 aa12.13□□□□□ -0.47
EPHB4-206ENST00000487222 MYOD1P15172 320 aa12.13□□□□□ -0.47
EPHB4-206ENST00000487222 CACNG7P62955 275 aa12.13□□□□□ -0.47
EPHB4-206ENST00000487222 Q6ZS49 121 aa12.13□□□□□ -0.47
EPHB4-206ENST00000487222 PLSCR4Q9NRQ2 329 aa12.13□□□□□ -0.47
EPHB4-206ENST00000487222 NHP2Q9NX24 153 aaKnown RBP12.13□□□□□ -0.47
EPHB4-206ENST00000487222 TMEM262E9PQX1 116 aa12.13□□□□□ -0.47
EPHB4-206ENST00000487222 SLC25A48Q6ZT89 311 aaKnown RBP12.13□□□□□ -0.47
EPHB4-206ENST00000487222 RNF144BQ7Z419 303 aa12.13□□□□□ -0.47
EPHB4-206ENST00000487222 DOPEY2Q9Y3R5 2298 aa12.13□□□□□ -0.47
EPHB4-206ENST00000487222 F2Z2F3 143 aa12.13□□□□□ -0.47
EPHB4-206ENST00000487222 PRB3Q04118 309 aaPredicted RBP12.13□□□□□ -0.47
EPHB4-206ENST00000487222 ORMDL2Q53FV1 153 aa12.13□□□□□ -0.47
EPHB4-206ENST00000487222 ITLN2Q8WWU7 325 aaPredicted RBP12.13□□□□□ -0.47
EPHB4-206ENST00000487222 FBLN7Q53RD9 439 aa12.13□□□□□ -0.47
EPHB4-206ENST00000487222 SPATA31B1PQ5VZV4 182 aa12.13□□□□□ -0.47
EPHB4-206ENST00000487222 CD24P25063 80 aa12.12□□□□□ -0.47
EPHB4-206ENST00000487222 RASL11AQ6T310 242 aa12.12□□□□□ -0.47
EPHB4-206ENST00000487222 IFI27L1Q96BM0 104 aa12.12□□□□□ -0.47
EPHB4-206ENST00000487222 SEPSECSQ9HD40 501 aaKnown RBP12.12□□□□□ -0.47
EPHB4-206ENST00000487222 MGST2Q99735 147 aa12.12□□□□□ -0.47
EPHB4-206ENST00000487222 CYSLTR1Q9Y271 337 aa12.12□□□□□ -0.47
EPHB4-206ENST00000487222 LY96Q9Y6Y9 160 aa12.12□□□□□ -0.47
EPHB4-206ENST00000487222 RLFQ13129 1914 aa12.12□□□□□ -0.47
EPHB4-206ENST00000487222 IL18BPO95998 194 aa12.12□□□□□ -0.47
EPHB4-206ENST00000487222 CDKN1AP38936 164 aa12.12□□□□□ -0.47
EPHB4-206ENST00000487222 C10orf55Q5SWW7 151 aa12.12□□□□□ -0.47
EPHB4-206ENST00000487222 ORAOV1Q8WV07 137 aa12.12□□□□□ -0.47
EPHB4-206ENST00000487222 VKORC1Q9BQB6 163 aa12.12□□□□□ -0.47
EPHB4-206ENST00000487222 CD7P09564 240 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms