RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TMEM187Q14656 261 aa17.93■□□□□ 0.46
LIME1-206ENST00000487026 STHQ8IWL8 128 aa17.93■□□□□ 0.46
LIME1-206ENST00000487026 C11orf45Q8TAV5 145 aa17.93■□□□□ 0.46
LIME1-206ENST00000487026 PRRT1Q99946 306 aa17.93■□□□□ 0.46
LIME1-206ENST00000487026 ZNF688P0C7X2 276 aa17.92■□□□□ 0.46
LIME1-206ENST00000487026 IGLC1P0CG04 106 aa17.92■□□□□ 0.46
LIME1-206ENST00000487026 SLC24A4Q8NFF2 622 aa17.92■□□□□ 0.46
LIME1-206ENST00000487026 OR1S2Q8NGQ3 325 aa17.92■□□□□ 0.46
LIME1-206ENST00000487026 NARS2Q96I59 477 aaKnown RBP17.92■□□□□ 0.46
LIME1-206ENST00000487026 FBXL17Q9UF56 701 aa17.92■□□□□ 0.46
LIME1-206ENST00000487026 AGRNO00468 2067 aa17.92■□□□□ 0.46
LIME1-206ENST00000487026 ANKRD20A5PA0PJZ0 165 aa17.91■□□□□ 0.46
LIME1-206ENST00000487026 KNCNA6PVL3 124 aa17.91■□□□□ 0.46
LIME1-206ENST00000487026 OR10J1P30954 320 aa17.91■□□□□ 0.46
LIME1-206ENST00000487026 RNASEH2CQ8TDP1 164 aaKnown RBP17.91■□□□□ 0.46
LIME1-206ENST00000487026 Q8WTZ3 238 aa17.91■□□□□ 0.46
LIME1-206ENST00000487026 RAB2BQ8WUD1 216 aa17.91■□□□□ 0.46
LIME1-206ENST00000487026 C11orf68Q9H3H3 251 aaKnown RBP17.91■□□□□ 0.46
LIME1-206ENST00000487026 CCDC59Q9P031 241 aaKnown RBP17.91■□□□□ 0.46
LIME1-206ENST00000487026 U3KQE9 123 aa17.91■□□□□ 0.46
LIME1-206ENST00000487026 GIG44P09565 113 aaPredicted RBP17.9■□□□□ 0.46
LIME1-206ENST00000487026 SLC25A4P12235 298 aa17.9■□□□□ 0.46
LIME1-206ENST00000487026 DCANP1Q8TF63 244 aa17.9■□□□□ 0.46
LIME1-206ENST00000487026 GRAMD2BQ96HH9 432 aa17.9■□□□□ 0.46
LIME1-206ENST00000487026 KCNIP3Q9Y2W7 256 aa17.9■□□□□ 0.46
LIME1-206ENST00000487026 GSTZ1O43708 216 aaPredicted RBP17.89■□□□□ 0.45
LIME1-206ENST00000487026 SULT1A3P0DMM9 295 aa17.89■□□□□ 0.45
LIME1-206ENST00000487026 SULT1A4P0DMN0 295 aa17.89■□□□□ 0.45
LIME1-206ENST00000487026 TMBIM6P55061 237 aa17.89■□□□□ 0.45
LIME1-206ENST00000487026 TRPT1Q86TN4 253 aaKnown RBP17.89■□□□□ 0.45
LIME1-206ENST00000487026 RPP25LQ8N5L8 163 aaKnown RBP17.89■□□□□ 0.45
LIME1-206ENST00000487026 NPIPB3Q92617 1050 aa17.89■□□□□ 0.45
LIME1-206ENST00000487026 ACY3Q96HD9 319 aa17.89■□□□□ 0.45
LIME1-206ENST00000487026 MCUBQ9NWR8 336 aa17.89■□□□□ 0.45
LIME1-206ENST00000487026 RABL2AQ9UBK7 228 aaPredicted RBP17.89■□□□□ 0.45
LIME1-206ENST00000487026 RABL2BQ9UNT1 228 aa17.89■□□□□ 0.45
LIME1-206ENST00000487026 HNRNPCP07910 306 aaKnown RBP eCLIP17.88■□□□□ 0.45
LIME1-206ENST00000487026 AKR1C4P17516 323 aa17.88■□□□□ 0.45
LIME1-206ENST00000487026 NPY1RP25929 384 aa17.88■□□□□ 0.45
LIME1-206ENST00000487026 YPEL3P61236 119 aaPredicted RBP17.88■□□□□ 0.45
LIME1-206ENST00000487026 DHRS2Q13268 280 aa17.88■□□□□ 0.45
LIME1-206ENST00000487026 NMSQ5H8A3 153 aa17.88■□□□□ 0.45
LIME1-206ENST00000487026 C16orf54Q6UWD8 224 aa17.88■□□□□ 0.45
LIME1-206ENST00000487026 LYZL2Q7Z4W2 148 aa17.88■□□□□ 0.45
LIME1-206ENST00000487026 SCP2D1Q9UJQ7 156 aa17.88■□□□□ 0.45
LIME1-206ENST00000487026 FRAS1Q86XX4 4008 aa17.88■□□□□ 0.45
LIME1-206ENST00000487026 IL4P05112 153 aa17.87■□□□□ 0.45
LIME1-206ENST00000487026 TNFSF8P32971 234 aa17.87■□□□□ 0.45
LIME1-206ENST00000487026 USF2Q15853 346 aaPredicted RBP17.87■□□□□ 0.45
LIME1-206ENST00000487026 ACTL10Q5JWF8 245 aa17.87■□□□□ 0.45
LIME1-206ENST00000487026 IL22RA2Q969J5 263 aa17.87■□□□□ 0.45
LIME1-206ENST00000487026 MFFQ9GZY8 342 aa17.87■□□□□ 0.45
LIME1-206ENST00000487026 RSL24D1Q9UHA3 163 aaKnown RBP17.87■□□□□ 0.45
LIME1-206ENST00000487026 DEDDO75618 318 aa17.86■□□□□ 0.45
LIME1-206ENST00000487026 IFNA10P01566 189 aa17.86■□□□□ 0.45
LIME1-206ENST00000487026 IFNA4P05014 189 aa17.86■□□□□ 0.45
LIME1-206ENST00000487026 C4BPBP20851 252 aa17.86■□□□□ 0.45
LIME1-206ENST00000487026 SUPT4H1P63272 117 aaKnown RBP17.86■□□□□ 0.45
LIME1-206ENST00000487026 ETFRF1Q6IPR1 90 aa17.86■□□□□ 0.45
LIME1-206ENST00000487026 GLMPQ8WWB7 406 aa17.86■□□□□ 0.45
LIME1-206ENST00000487026 SOSTQ9BQB4 213 aa17.86■□□□□ 0.45
LIME1-206ENST00000487026 SLIRPQ9GZT3 109 aaKnown RBP17.86■□□□□ 0.45
LIME1-206ENST00000487026 RBKSQ9H477 322 aa17.86■□□□□ 0.45
LIME1-206ENST00000487026 HELTA6NFD8 242 aa17.85■□□□□ 0.45
LIME1-206ENST00000487026 FABP12A6NFH5 140 aa17.85■□□□□ 0.45
LIME1-206ENST00000487026 PSMG4Q5JS54 123 aa17.85■□□□□ 0.45
LIME1-206ENST00000487026 Q8NAQ8 132 aa17.85■□□□□ 0.45
LIME1-206ENST00000487026 SCGB3A2Q96PL1 93 aa17.85■□□□□ 0.45
LIME1-206ENST00000487026 BCL7BQ9BQE9 202 aa17.85■□□□□ 0.45
LIME1-206ENST00000487026 RD3LP0DJH9 198 aa17.84■□□□□ 0.45
LIME1-206ENST00000487026 EIF2B2P49770 351 aaKnown RBP17.84■□□□□ 0.45
LIME1-206ENST00000487026 DTD1Q8TEA8 209 aa17.84■□□□□ 0.45
LIME1-206ENST00000487026 RAB40CQ96S21 281 aa17.84■□□□□ 0.45
LIME1-206ENST00000487026 CLEC5AQ9NY25 188 aa17.84■□□□□ 0.45
LIME1-206ENST00000487026 HSPB7Q9UBY9 170 aa17.84■□□□□ 0.45
LIME1-206ENST00000487026 A0A0B4J2A0 478 aa17.83■□□□□ 0.44
LIME1-206ENST00000487026 IGHV4-28A0A0C4DH34 117 aa17.83■□□□□ 0.44
LIME1-206ENST00000487026 H3BMQ9 156 aa17.83■□□□□ 0.44
LIME1-206ENST00000487026 TOMM40O96008 361 aa17.83■□□□□ 0.44
LIME1-206ENST00000487026 RBMY1A1P0DJD3 496 aaKnown RBP17.83■□□□□ 0.44
LIME1-206ENST00000487026 RBMY1CP0DJD4 496 aa17.83■□□□□ 0.44
LIME1-206ENST00000487026 CCR6P51684 374 aa17.83■□□□□ 0.44
LIME1-206ENST00000487026 SMCO1Q147U7 214 aa17.83■□□□□ 0.44
LIME1-206ENST00000487026 RBMY1FQ15415 496 aaKnown RBP17.83■□□□□ 0.44
LIME1-206ENST00000487026 LGALS9CQ6DKI2 356 aa17.83■□□□□ 0.44
LIME1-206ENST00000487026 MORN3Q6PF18 240 aaPredicted RBP17.83■□□□□ 0.44
LIME1-206ENST00000487026 NOXA1Q86UR1 476 aa17.83■□□□□ 0.44
LIME1-206ENST00000487026 LGI3Q8N145 548 aa17.83■□□□□ 0.44
LIME1-206ENST00000487026 SHPKQ9UHJ6 478 aa17.83■□□□□ 0.44
LIME1-206ENST00000487026 U3KQ87 197 aa17.83■□□□□ 0.44
LIME1-206ENST00000487026 SPP1P10451 314 aa17.82■□□□□ 0.44
LIME1-206ENST00000487026 PSG1P11464 419 aa17.82■□□□□ 0.44
LIME1-206ENST00000487026 AP2S1P53680 142 aaPredicted RBP17.82■□□□□ 0.44
LIME1-206ENST00000487026 MCFD2Q8NI22 146 aa17.82■□□□□ 0.44
LIME1-206ENST00000487026 CACFD1Q9UGQ2 172 aa17.82■□□□□ 0.44
LIME1-206ENST00000487026 DNAH10Q8IVF4 4471 aa17.82■□□□□ 0.44
LIME1-206ENST00000487026 BUB3O43684 328 aa17.81■□□□□ 0.44
LIME1-206ENST00000487026 OR51G1Q8NGK1 321 aa17.81■□□□□ 0.44
LIME1-206ENST00000487026 C2CD4CQ8TF44 421 aa17.81■□□□□ 0.44
LIME1-206ENST00000487026 FAM90A26D6RGX4 464 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms