RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 HPRT1P00492 218 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 IFNA4P05014 189 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 REG1AP05451 166 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 SERPINE2P07093 398 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 CTSDP07339 412 aaPredicted RBP2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 NQO2P16083 231 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 RPL35AP18077 110 aaKnown RBP2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 RAB3BP20337 219 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 MYL9P24844 172 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 OR10A3P58181 314 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 TIMM50Q3ZCQ8 353 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 SLC25A24Q6NUK1 477 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 SSX9Q7RTT3 188 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 PRSS48Q7RTY5 328 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 GDPD1Q8N9F7 314 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 C11orf45Q8TAV5 145 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 CD300LFQ8TDQ1 290 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 COMMD5Q9GZQ3 224 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 C11orf68Q9H3H3 251 aaKnown RBP2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 HRASLSQ9HDD0 168 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 CCL28Q9NRJ3 127 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 TAS2R8Q9NYW2 309 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 SMPXQ9UHP9 88 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 ETV7Q9Y603 341 aa2.86□□□□□ -1.95
SNRNP40-205ENST00000486941 KIAA1109Q2LD37 5005 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 TRAV3A0A0B4J244 114 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 IGHV7-4-1A0A0J9YVY3 117 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 TEX50A0A1B0GTY4 177 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 TMEM235A6NFC5 223 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 OR2T8A6NH00 312 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 C11orf94C9JXX5 98 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 SULT1C2O00338 296 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 CHEK1O14757 476 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 SSX5O60225 188 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 MRPS14O60783 128 aaKnown RBP2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 PAGE4O60829 102 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 PPYP01298 95 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 CD5P06127 495 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 CTSGP08311 255 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 TRAPPC2P0DI81 140 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 TRAPPC2BP0DI82 140 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 OR13C7P0DN81 318 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 RPA2P15927 270 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 FGF9P31371 208 aaPredicted RBP2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 FCGR2BP31994 310 aaPredicted RBP2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 FCGR2CP31995 323 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 GNG2P59768 71 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 ARPC4P59998 168 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 WT1-ASQ06250 92 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 CATR1Q13166 79 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 TBCEQ15813 527 aaPredicted RBP2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 ZNF773Q6PK81 442 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 TPRA1Q86W33 373 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 HOGA1Q86XE5 327 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 APRG1Q8IVJ8 170 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 Q8N377 158 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 TMEM116Q8NCL8 245 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 BEST4Q8NFU0 473 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 OR10W1Q8NGF6 305 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 OR1L8Q8NGR8 309 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 OR11H2Q8NH07 326 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 OR5B3Q8NH48 314 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 GIMAP1Q8WWP7 306 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 DGCR14Q96DF8 476 aaKnown RBP2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 RNF125Q96EQ8 232 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 OR10C1Q96KK4 312 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 RNF2Q99496 336 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 CHRDL1Q9BU40 450 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 C20orf24Q9BUV8 137 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 RHPN1-AS1Q9BWJ2 59 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 SLC5A7Q9GZV3 580 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 HRH4Q9H3N8 390 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 NDUFA4L2Q9NRX3 87 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 NDUFB11Q9NX14 153 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 C21orf62Q9NYP8 219 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 FBXL17Q9UF56 701 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 APLNQ9ULZ1 77 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 F11RQ9Y624 299 aaKnown RBP2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 PCLOQ9Y6V0 5065 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 HECTD4Q9Y4D8 3996 aa2.85□□□□□ -1.95
SNRNP40-205ENST00000486941 IGHV3OR16-8A0A075B7F1 116 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 TRAV14DV4A0A0A6YYC5 116 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 A0A0A6YYH2 397 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 A6NJ64 397 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 C15orf61A6NNL5 157 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 EPM2AB3EWF7 344 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 K7EIM0 57 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 NUPL2O15504 423 aaKnown RBP2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 TNFSF12O43508 249 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 ZNF207O43670 478 aaKnown RBP2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 DFFBO76075 338 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 F2RP25116 425 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 MFAP2P55001 183 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 AQP4P55087 323 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 ERVK-16P61578 105 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 PAFAH1B2P68402 229 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 Q56UQ5 140 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 TMEM41BQ5BJD5 291 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 C22orf42Q6IC83 251 aa2.84□□□□□ -1.95
SNRNP40-205ENST00000486941 DHRS11Q6UWP2 260 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms