RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 Q8WTZ3 238 aa16.25■□□□□ 0.19
HLA-F-228ENST00000486194 RNF183Q96D59 192 aa16.25■□□□□ 0.19
HLA-F-228ENST00000486194 GRAMD2BQ96HH9 432 aa16.25■□□□□ 0.19
HLA-F-228ENST00000486194 MS4A6AQ9H2W1 248 aa16.25■□□□□ 0.19
HLA-F-228ENST00000486194 HSPB7Q9UBY9 170 aa16.25■□□□□ 0.19
HLA-F-228ENST00000486194 U3KQ87 197 aa16.25■□□□□ 0.19
HLA-F-228ENST00000486194 IGHV3-66A0A0C4DH42 116 aa16.24■□□□□ 0.19
HLA-F-228ENST00000486194 DUXBA0A1W2PPF3 345 aa16.24■□□□□ 0.19
HLA-F-228ENST00000486194 JTBO76095 146 aa16.24■□□□□ 0.19
HLA-F-228ENST00000486194 IFNA10P01566 189 aa16.24■□□□□ 0.19
HLA-F-228ENST00000486194 RND2P52198 227 aa16.24■□□□□ 0.19
HLA-F-228ENST00000486194 YPEL3P61236 119 aaPredicted RBP16.24■□□□□ 0.19
HLA-F-228ENST00000486194 TIGITQ495A1 244 aa16.24■□□□□ 0.19
HLA-F-228ENST00000486194 TMEM128Q5BJH2 165 aa16.24■□□□□ 0.19
HLA-F-228ENST00000486194 LYZL2Q7Z4W2 148 aa16.24■□□□□ 0.19
HLA-F-228ENST00000486194 SLC25A21Q9BQT8 299 aaPredicted RBP16.24■□□□□ 0.19
HLA-F-228ENST00000486194 PRR13Q9NZ81 148 aa16.24■□□□□ 0.19
HLA-F-228ENST00000486194 V9GYH0 126 aa16.24■□□□□ 0.19
HLA-F-228ENST00000486194 ZNF701M0R085 212 aaPredicted RBP16.23■□□□□ 0.19
HLA-F-228ENST00000486194 NXPH3O95157 252 aa16.23■□□□□ 0.19
HLA-F-228ENST00000486194 IGLC1P0CG04 106 aa16.23■□□□□ 0.19
HLA-F-228ENST00000486194 OR10J1P30954 320 aa16.23■□□□□ 0.19
HLA-F-228ENST00000486194 EIF2B2P49770 351 aaKnown RBP16.23■□□□□ 0.19
HLA-F-228ENST00000486194 ATP5IP56385 69 aaPredicted RBP16.23■□□□□ 0.19
HLA-F-228ENST00000486194 TMED4Q7Z7H5 227 aa16.23■□□□□ 0.19
HLA-F-228ENST00000486194 LILRB2Q8N423 598 aa16.23■□□□□ 0.19
HLA-F-228ENST00000486194 DTD1Q8TEA8 209 aa16.23■□□□□ 0.19
HLA-F-228ENST00000486194 CSTL1Q9H114 145 aa16.23■□□□□ 0.19
HLA-F-228ENST00000486194 RYR3Q15413 4870 aa16.22■□□□□ 0.19
HLA-F-228ENST00000486194 MPTX1A8MV57 137 aa16.22■□□□□ 0.19
HLA-F-228ENST00000486194 LYG2Q86SG7 212 aa16.22■□□□□ 0.19
HLA-F-228ENST00000486194 TMEM217Q8N7C4 229 aa16.22■□□□□ 0.19
HLA-F-228ENST00000486194 OR1S1Q8NH92 325 aa16.22■□□□□ 0.19
HLA-F-228ENST00000486194 RABAC1Q9UI14 185 aa16.22■□□□□ 0.19
HLA-F-228ENST00000486194 P2RY1P47900 373 aa16.21■□□□□ 0.19
HLA-F-228ENST00000486194 ZNF79Q15937 498 aa16.21■□□□□ 0.19
HLA-F-228ENST00000486194 SPANXN2Q5MJ10 180 aa16.21■□□□□ 0.19
HLA-F-228ENST00000486194 CCDC190Q86UF4 302 aa16.21■□□□□ 0.19
HLA-F-228ENST00000486194 GATAD1Q8WUU5 269 aa16.21■□□□□ 0.19
HLA-F-228ENST00000486194 A0A0J9YWU9 116 aa16.2■□□□□ 0.18
HLA-F-228ENST00000486194 ATF4P18848 351 aaPredicted RBP16.2■□□□□ 0.18
HLA-F-228ENST00000486194 ZNF124Q15973 351 aa16.2■□□□□ 0.18
HLA-F-228ENST00000486194 STXBP6Q8NFX7 210 aa16.2■□□□□ 0.18
HLA-F-228ENST00000486194 TMEM170AQ8WVE7 144 aa16.2■□□□□ 0.18
HLA-F-228ENST00000486194 NPIPB3Q92617 1050 aa16.2■□□□□ 0.18
HLA-F-228ENST00000486194 RBM38Q9H0Z9 239 aaKnown RBP16.2■□□□□ 0.18
HLA-F-228ENST00000486194 RBKSQ9H477 322 aa16.2■□□□□ 0.18
HLA-F-228ENST00000486194 TENM2Q9NT68 2774 aa16.19■□□□□ 0.18
HLA-F-228ENST00000486194 HELTA6NFD8 242 aa16.19■□□□□ 0.18
HLA-F-228ENST00000486194 HNRNPCP07910 306 aaKnown RBP eCLIP16.19■□□□□ 0.18
HLA-F-228ENST00000486194 VAMP1P23763 118 aa16.19■□□□□ 0.18
HLA-F-228ENST00000486194 AP2S1P53680 142 aaPredicted RBP16.19■□□□□ 0.18
HLA-F-228ENST00000486194 DEFB131AP59861 70 aa16.19■□□□□ 0.18
HLA-F-228ENST00000486194 ACY3Q96HD9 319 aa16.19■□□□□ 0.18
HLA-F-228ENST00000486194 IFNA4P05014 189 aa16.18■□□□□ 0.18
HLA-F-228ENST00000486194 SLC25A6P12236 298 aa16.18■□□□□ 0.18
HLA-F-228ENST00000486194 LRTM2Q8N967 370 aa16.18■□□□□ 0.18
HLA-F-228ENST00000486194 U3KQE9 123 aa16.18■□□□□ 0.18
HLA-F-228ENST00000486194 K7EQG2 157 aa16.17■□□□□ 0.18
HLA-F-228ENST00000486194 TOMM40O96008 361 aa16.17■□□□□ 0.18
HLA-F-228ENST00000486194 IL4P05112 153 aa16.17■□□□□ 0.18
HLA-F-228ENST00000486194 RD3LP0DJH9 198 aa16.17■□□□□ 0.18
HLA-F-228ENST00000486194 INPP1P49441 399 aa16.17■□□□□ 0.18
HLA-F-228ENST00000486194 RBMS2Q15434 407 aaKnown RBP16.17■□□□□ 0.18
HLA-F-228ENST00000486194 STHQ8IWL8 128 aa16.17■□□□□ 0.18
HLA-F-228ENST00000486194 TMED3Q9Y3Q3 217 aa16.17■□□□□ 0.18
HLA-F-228ENST00000486194 CXorf65A6NEN9 183 aa16.16■□□□□ 0.18
HLA-F-228ENST00000486194 NUPR2A6NF83 97 aa16.16■□□□□ 0.18
HLA-F-228ENST00000486194 FAM90A26D6RGX4 464 aa16.16■□□□□ 0.18
HLA-F-228ENST00000486194 MED6O75586 246 aa16.16■□□□□ 0.18
HLA-F-228ENST00000486194 GPX4P36969 197 aaPredicted RBP16.16■□□□□ 0.18
HLA-F-228ENST00000486194 LEMD1Q68G75 181 aa16.16■□□□□ 0.18
HLA-F-228ENST00000486194 CENPSQ8N2Z9 138 aa16.16■□□□□ 0.18
HLA-F-228ENST00000486194 PFDN2Q9UHV9 154 aa16.16■□□□□ 0.18
HLA-F-228ENST00000486194 PITX3O75364 302 aa16.15■□□□□ 0.18
HLA-F-228ENST00000486194 SFT2D2O95562 160 aa16.15■□□□□ 0.18
HLA-F-228ENST00000486194 CA1P00915 261 aaPredicted RBP16.15■□□□□ 0.18
HLA-F-228ENST00000486194 NUP62P37198 522 aaPredicted RBP16.15■□□□□ 0.18
HLA-F-228ENST00000486194 RAB11AP62491 216 aa16.15■□□□□ 0.18
HLA-F-228ENST00000486194 C16orf54Q6UWD8 224 aa16.15■□□□□ 0.18
HLA-F-228ENST00000486194 SLC35E1Q96K37 410 aa16.15■□□□□ 0.18
HLA-F-228ENST00000486194 RARRES2Q99969 163 aa16.15■□□□□ 0.18
HLA-F-228ENST00000486194 DYNC2H1Q8NCM8 4307 aaKnown RBP16.14■□□□□ 0.17
HLA-F-228ENST00000486194 NAP1L6A6NFF2 107 aa16.14■□□□□ 0.17
HLA-F-228ENST00000486194 FABP1P07148 127 aa16.14■□□□□ 0.17
HLA-F-228ENST00000486194 UBE2MP61081 183 aaKnown RBP16.14■□□□□ 0.17
HLA-F-228ENST00000486194 RPP30P78346 268 aaKnown RBP16.14■□□□□ 0.17
HLA-F-228ENST00000486194 USF2Q15853 346 aaPredicted RBP16.14■□□□□ 0.17
HLA-F-228ENST00000486194 TRIQKQ629K1 86 aa16.14■□□□□ 0.17
HLA-F-228ENST00000486194 FAM24BQ8N5W8 94 aa16.14■□□□□ 0.17
HLA-F-228ENST00000486194 OR51G1Q8NGK1 321 aa16.14■□□□□ 0.17
HLA-F-228ENST00000486194 DCANP1Q8TF63 244 aa16.14■□□□□ 0.17
HLA-F-228ENST00000486194 CIB3Q96Q77 187 aaPredicted RBP16.14■□□□□ 0.17
HLA-F-228ENST00000486194 SRRQ9GZT4 340 aa16.14■□□□□ 0.17
HLA-F-228ENST00000486194 PSG1P11464 419 aa16.13■□□□□ 0.17
HLA-F-228ENST00000486194 DHRS2Q13268 280 aa16.13■□□□□ 0.17
HLA-F-228ENST00000486194 PPP1R1AQ13522 171 aa16.13■□□□□ 0.17
HLA-F-228ENST00000486194 PMS2P11Q13670 270 aa16.13■□□□□ 0.17
HLA-F-228ENST00000486194 TMEM41BQ5BJD5 291 aa16.13■□□□□ 0.17
HLA-F-228ENST00000486194 GLMPQ8WWB7 406 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms