RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 AP2S1P53680 142 aaPredicted RBP4.34□□□□□ -1.71
COPS3-208ENST00000486032 SLURP1P55000 103 aa4.34□□□□□ -1.71
COPS3-208ENST00000486032 RAP2BP61225 183 aa4.34□□□□□ -1.71
COPS3-208ENST00000486032 AKR1C1Q04828 323 aa4.34□□□□□ -1.71
COPS3-208ENST00000486032 CD69Q07108 199 aa4.34□□□□□ -1.71
COPS3-208ENST00000486032 RPEL1Q2QD12 228 aa4.34□□□□□ -1.71
COPS3-208ENST00000486032 BSXQ3C1V8 233 aa4.34□□□□□ -1.71
COPS3-208ENST00000486032 ETFRF1Q6IPR1 90 aa4.34□□□□□ -1.71
COPS3-208ENST00000486032 PRSS54Q6PEW0 395 aa4.34□□□□□ -1.71
COPS3-208ENST00000486032 SLC16A13Q7RTY0 426 aa4.34□□□□□ -1.71
COPS3-208ENST00000486032 TMEM252Q8N6L7 170 aa4.34□□□□□ -1.71
COPS3-208ENST00000486032 ZNF114Q8NC26 417 aa4.34□□□□□ -1.71
COPS3-208ENST00000486032 OR10P1Q8NGE3 313 aa4.34□□□□□ -1.71
COPS3-208ENST00000486032 OR1N2Q8NGR9 330 aa4.34□□□□□ -1.71
COPS3-208ENST00000486032 RNASEH2CQ8TDP1 164 aaKnown RBP4.34□□□□□ -1.71
COPS3-208ENST00000486032 C4orf3Q8WVX3 66 aa4.34□□□□□ -1.71
COPS3-208ENST00000486032 NPIPB3Q92617 1050 aa4.34□□□□□ -1.71
COPS3-208ENST00000486032 RAX2Q96IS3 184 aa4.34□□□□□ -1.71
COPS3-208ENST00000486032 SMIM3Q9BZL3 60 aa4.34□□□□□ -1.71
COPS3-208ENST00000486032 FBN3Q75N90 2809 aa4.34□□□□□ -1.72
COPS3-208ENST00000486032 DNAH3Q8TD57 4116 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.33□□□□□ -1.72
COPS3-208ENST00000486032 TRBV7-1A0A0A6YYK4 115 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 ZNF320A2RRD8 509 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 ZFP92A6NM28 416 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 I3L521 148 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 CCL24O00175 119 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 NUPL2O15504 423 aaKnown RBP4.33□□□□□ -1.72
COPS3-208ENST00000486032 TGOLN2O43493 480 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 ZNF207O43670 478 aaKnown RBP4.33□□□□□ -1.72
COPS3-208ENST00000486032 YIF1AO95070 293 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 OR2C1O95371 312 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 LY86O95711 162 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 HSPB1P04792 205 aaKnown RBP4.33□□□□□ -1.72
COPS3-208ENST00000486032 RPL12P30050 165 aaKnown RBP4.33□□□□□ -1.72
COPS3-208ENST00000486032 NUP62P37198 522 aaPredicted RBP4.33□□□□□ -1.72
COPS3-208ENST00000486032 MYCNOSP40205 109 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 P2RY1P47900 373 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 TAS2R30P59541 319 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 EWSR1Q01844 656 aaKnown RBP eCLIP4.33□□□□□ -1.72
COPS3-208ENST00000486032 NHLH2Q02577 135 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 FGL1Q08830 312 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 SLC38A11Q08AI6 406 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 ZNF616Q08AN1 781 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 ARL16Q0P5N6 197 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 OR2F1Q13607 317 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 CLINT1Q14677 625 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 TIGITQ495A1 244 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 ZNF343Q6P1L6 599 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 TMEM14EPQ6UXP3 125 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 ACOT7LQ6ZUV0 252 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 AKAP14Q86UN6 197 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 STX12Q86Y82 276 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 RNF152Q8N8N0 203 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 OR4F17Q8NGA8 305 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 ZNF502Q8TBZ5 544 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 MYOZ3Q8TDC0 251 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 VN1R17PQ8TDU5 208 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 BSCL2Q96G97 398 aaPredicted RBP4.33□□□□□ -1.72
COPS3-208ENST00000486032 CCDC140Q96MF4 163 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 OR4F4Q96R69 305 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 C20orf24Q9BUV8 137 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 RNF126Q9BV68 326 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 SLC25A31Q9H0C2 315 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 C11orf1Q9H5F2 150 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 LYRM2Q9NU23 88 aaPredicted RBP4.33□□□□□ -1.72
COPS3-208ENST00000486032 SELENOKQ9Y6D0 94 aa4.33□□□□□ -1.72
COPS3-208ENST00000486032 UBE2L5PA0A1B0GUS4 154 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 PMS2P5A8MQ11 134 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 BMPR1BO00238 502 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 ARPC5O15511 151 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 GGCTO75223 188 aaKnown RBP4.32□□□□□ -1.72
COPS3-208ENST00000486032 CLN5O75503 358 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 SCGB2A1O75556 95 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 BRI3O95415 125 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 SLC25A4P12235 298 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 OR10J1P30954 320 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 HOXD3P31249 432 aaPredicted RBP4.32□□□□□ -1.72
COPS3-208ENST00000486032 GPX4P36969 197 aaPredicted RBP4.32□□□□□ -1.72
COPS3-208ENST00000486032 SULT1A1P50225 295 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 ATP5IP56385 69 aaPredicted RBP4.32□□□□□ -1.72
COPS3-208ENST00000486032 SYNJ2BPP57105 145 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 HBG1P69891 147 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 HBG2P69892 147 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 SRSF3P84103 164 aaKnown RBP4.32□□□□□ -1.72
COPS3-208ENST00000486032 BAXQ07812 192 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 CD300CQ08708 224 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 GAMTQ14353 236 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 ZNF546Q86UE3 836 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 HAPLN4Q86UW8 402 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 OR1S2Q8NGQ3 325 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 OR5C1Q8NGR4 320 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 DLX4Q92988 240 aaPredicted RBP4.32□□□□□ -1.72
COPS3-208ENST00000486032 CHRDL1Q9BU40 450 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 HSPB11Q9Y547 144 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 VWFP04275 2813 aa4.32□□□□□ -1.72
COPS3-208ENST00000486032 PRKDCP78527 4128 aaKnown RBP4.32□□□□□ -1.72
COPS3-208ENST00000486032 NBEAL1Q6ZS30 2694 aa4.31□□□□□ -1.72
COPS3-208ENST00000486032 TRAV30A0A087WSZ9 112 aa4.31□□□□□ -1.72
COPS3-208ENST00000486032 IGHV3-49A0A0A0MS15 119 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms