RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 IGKV6D-21A0A0A0MT36 114 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 A0A0G2JRQ6 117 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 A0A1W2PP18 115 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 ARRDC5A6NEK1 342 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 PRAC2D3DTV9 90 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 H3BQ15 152 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 LY6LH3BQJ8 138 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 M0R381 172 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 GNGT2O14610 69 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 FFAR1O14842 300 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 GEMIN2O14893 280 aaKnown RBP3.46□□□□□ -1.86
RTN4-213ENST00000485749 SRSF10O75494 262 aaKnown RBP3.46□□□□□ -1.86
RTN4-213ENST00000485749 PRSS1P07477 247 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 LGALS3P17931 250 aaKnown RBP3.46□□□□□ -1.86
RTN4-213ENST00000485749 OPRM1P35372 400 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 SRP14P37108 136 aaKnown RBP3.46□□□□□ -1.86
RTN4-213ENST00000485749 FOXA3P55318 350 aaPredicted RBP3.46□□□□□ -1.86
RTN4-213ENST00000485749 TAS2R19P59542 299 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 ZNF90Q03938 601 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 ATP5G2Q06055 141 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 FHL1Q13642 323 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 KIAA0040Q15053 153 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 KIAA1644Q3SXP7 199 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 FBXL19-AS1Q494R0 122 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 WDR38Q5JTN6 314 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 XAF1Q6GPH4 301 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 ZNF880Q6PDB4 577 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 C6orf223Q8N319 242 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 YIPF7Q8N8F6 280 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 OR5D16Q8NGK9 328 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 OR2A12Q8NGT7 310 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 CHCHD10Q8WYQ3 142 aaPredicted RBP3.46□□□□□ -1.86
RTN4-213ENST00000485749 ZNF689Q96CS4 500 aaPredicted RBP3.46□□□□□ -1.86
RTN4-213ENST00000485749 AQP10Q96PS8 301 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 TMEM204Q9BSN7 226 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 SEC11CQ9BY50 192 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 TMEM106BQ9NUM4 274 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 FLVCR1Q9Y5Y0 555 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 SLC25A15Q9Y619 301 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 PSME4Q14997 1843 aa3.46□□□□□ -1.86
RTN4-213ENST00000485749 DSPPQ9NZW4 1301 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 CDK5RAP2Q96SN8 1893 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 LTBP1Q14766 1721 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 EVPLQ92817 2033 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 TRBV7-6A0A0J9YX20 115 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 NDUFB3O43676 98 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 PGLYRP1O75594 196 aaPredicted RBP3.45□□□□□ -1.86
RTN4-213ENST00000485749 NAPSAO96009 420 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 HLA-DQB1P01920 261 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 SEC11BP0C7V7 166 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 ZNF705DP0CH99 300 aaPredicted RBP3.45□□□□□ -1.86
RTN4-213ENST00000485749 PYYP10082 97 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 CXCL8P10145 99 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 CXCL5P42830 114 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 RPL34P49207 117 aaKnown RBP3.45□□□□□ -1.86
RTN4-213ENST00000485749 ZNF83P51522 516 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 DSCR9P59020 149 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 KRTAP10-7P60409 375 aaPredicted RBP3.45□□□□□ -1.86
RTN4-213ENST00000485749 ELOCQ15369 112 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 RRN3P1Q2M238 152 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 RUSC1-AS1Q66K80 236 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 SLC25A34Q6PIV7 304 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 FAM19A3Q7Z5A8 133 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 LINC00596Q86U02 117 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 RPS19BP1Q86WX3 136 aaKnown RBP3.45□□□□□ -1.86
RTN4-213ENST00000485749 SAXO1Q8IYX7 474 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 LINC00471Q8N535 108 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 DRAM1Q8N682 238 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 STPG4Q8N801 248 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 ZIC4Q8N9L1 334 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 OR4B1Q8NGF8 309 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 OR4A5Q8NH83 315 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 RHOXF1Q8NHV9 184 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 TOMM6Q96B49 74 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 RNF185Q96GF1 192 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 ABHD14BQ96IU4 210 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 LYZL4Q96KX0 146 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 CCL13Q99616 98 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 RNF126Q9BV68 326 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 CA10Q9NS85 328 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 TAAR3PQ9P1P4 343 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 RARRES3Q9UL19 164 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 RGPD3A6NKT7 1758 aaPredicted RBP3.45□□□□□ -1.86
RTN4-213ENST00000485749 RGPD4Q7Z3J3 1758 aa3.45□□□□□ -1.86
RTN4-213ENST00000485749 ZNFX1Q9P2E3 1918 aaKnown RBP3.44□□□□□ -1.86
RTN4-213ENST00000485749 TRAV13-1A0A0B4J241 112 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 IGKV6-21A0A0C4DH24 114 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 IGHV1-58A0A0C4DH39 117 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 C3orf85A0A1B0GTC6 90 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 TEX48A0A1B0GUV7 120 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 IFITM10A6NMD0 228 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 C4orf51C9J302 202 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 H3BMG7 143 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 FXYD1O00168 92 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 TAX1BP3O14907 124 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 UQCRQO14949 82 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 PPP1R3DO95685 299 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 CYB5AP00167 134 aa3.44□□□□□ -1.86
RTN4-213ENST00000485749 POLR2IP36954 125 aaKnown RBP3.44□□□□□ -1.86
RTN4-213ENST00000485749 POLR2JP52435 117 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms