RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 CRYBB3P26998 211 aa12.54□□□□□ -0.4
SMC4-216ENST00000485645 HTR2BP41595 481 aa12.54□□□□□ -0.4
SMC4-216ENST00000485645 NANOS2P60321 138 aaKnown RBP12.54□□□□□ -0.4
SMC4-216ENST00000485645 RBMS2Q15434 407 aaKnown RBP12.54□□□□□ -0.4
SMC4-216ENST00000485645 SURF2Q15527 256 aaPredicted RBP12.54□□□□□ -0.4
SMC4-216ENST00000485645 PYDC2Q56P42 97 aa12.54□□□□□ -0.4
SMC4-216ENST00000485645 STXBP6Q8NFX7 210 aa12.54□□□□□ -0.4
SMC4-216ENST00000485645 GLYATL2Q8WU03 294 aa12.54□□□□□ -0.4
SMC4-216ENST00000485645 RTBDNQ9BSG5 229 aaPredicted RBP12.54□□□□□ -0.4
SMC4-216ENST00000485645 NAA60Q9H7X0 242 aa12.54□□□□□ -0.4
SMC4-216ENST00000485645 FBXL17Q9UF56 701 aa12.54□□□□□ -0.4
SMC4-216ENST00000485645 FRAS1Q86XX4 4008 aa12.53□□□□□ -0.4
SMC4-216ENST00000485645 P2RY1P47900 373 aa12.53□□□□□ -0.4
SMC4-216ENST00000485645 DHODHQ02127 395 aa12.53□□□□□ -0.4
SMC4-216ENST00000485645 ZNF79Q15937 498 aa12.53□□□□□ -0.4
SMC4-216ENST00000485645 TIGITQ495A1 244 aa12.53□□□□□ -0.4
SMC4-216ENST00000485645 AARDQ4LEZ3 155 aa12.53□□□□□ -0.4
SMC4-216ENST00000485645 OR51S1Q8NGJ8 323 aa12.53□□□□□ -0.4
SMC4-216ENST00000485645 LHFPL5Q8TAF8 219 aa12.53□□□□□ -0.4
SMC4-216ENST00000485645 RBPMSQ93062 196 aaKnown RBP12.53□□□□□ -0.4
SMC4-216ENST00000485645 GRAMD2BQ96HH9 432 aa12.53□□□□□ -0.4
SMC4-216ENST00000485645 HEYLQ9NQ87 328 aaPredicted RBP12.53□□□□□ -0.4
SMC4-216ENST00000485645 K7EQG2 157 aa12.52□□□□□ -0.41
SMC4-216ENST00000485645 IGKV1-17P01599 117 aa12.52□□□□□ -0.41
SMC4-216ENST00000485645 C2orf83Q53S99 150 aa12.52□□□□□ -0.41
SMC4-216ENST00000485645 LGALS9CQ6DKI2 356 aa12.52□□□□□ -0.41
SMC4-216ENST00000485645 SELENOHQ8IZQ5 122 aaKnown RBP12.52□□□□□ -0.41
SMC4-216ENST00000485645 TRIM63Q969Q1 353 aa12.52□□□□□ -0.41
SMC4-216ENST00000485645 CACNG5Q9UF02 275 aa12.52□□□□□ -0.41
SMC4-216ENST00000485645 SCP2D1Q9UJQ7 156 aa12.52□□□□□ -0.41
SMC4-216ENST00000485645 GPR132Q9UNW8 380 aa12.52□□□□□ -0.41
SMC4-216ENST00000485645 AGRNO00468 2067 aa12.51□□□□□ -0.41
SMC4-216ENST00000485645 DEFB4AO15263 64 aa12.51□□□□□ -0.41
SMC4-216ENST00000485645 SLC25A4P12235 298 aa12.51□□□□□ -0.41
SMC4-216ENST00000485645 EIF2B2P49770 351 aaKnown RBP12.51□□□□□ -0.41
SMC4-216ENST00000485645 AP3S2P59780 193 aa12.51□□□□□ -0.41
SMC4-216ENST00000485645 KLF9Q13886 244 aaPredicted RBP12.51□□□□□ -0.41
SMC4-216ENST00000485645 TMEM41BQ5BJD5 291 aa12.51□□□□□ -0.41
SMC4-216ENST00000485645 SPANXN2Q5MJ10 180 aa12.51□□□□□ -0.41
SMC4-216ENST00000485645 TMEM268Q5VZI3 342 aa12.51□□□□□ -0.41
SMC4-216ENST00000485645 RPP25LQ8N5L8 163 aaKnown RBP12.51□□□□□ -0.41
SMC4-216ENST00000485645 OR1S2Q8NGQ3 325 aa12.51□□□□□ -0.41
SMC4-216ENST00000485645 RNASEH2CQ8TDP1 164 aaKnown RBP12.51□□□□□ -0.41
SMC4-216ENST00000485645 Q8WTZ3 238 aa12.51□□□□□ -0.41
SMC4-216ENST00000485645 GPR146Q96CH1 333 aa12.51□□□□□ -0.41
SMC4-216ENST00000485645 KRTAP3-3Q9BYR6 98 aa12.51□□□□□ -0.41
SMC4-216ENST00000485645 KRTAP3-2Q9BYR7 98 aa12.51□□□□□ -0.41
SMC4-216ENST00000485645 MCUBQ9NWR8 336 aa12.51□□□□□ -0.41
SMC4-216ENST00000485645 CRYM-AS1A6NIL9 109 aa12.5□□□□□ -0.41
SMC4-216ENST00000485645 CEBPZOSA8MTT3 80 aa12.5□□□□□ -0.41
SMC4-216ENST00000485645 ZNF688P0C7X2 276 aa12.5□□□□□ -0.41
SMC4-216ENST00000485645 IGLC1P0CG04 106 aa12.5□□□□□ -0.41
SMC4-216ENST00000485645 FAUP35544 74 aaKnown RBP12.5□□□□□ -0.41
SMC4-216ENST00000485645 PRSS54Q6PEW0 395 aa12.5□□□□□ -0.41
SMC4-216ENST00000485645 TRPT1Q86TN4 253 aaKnown RBP12.5□□□□□ -0.41
SMC4-216ENST00000485645 TOMM5Q8N4H5 51 aa12.5□□□□□ -0.41
SMC4-216ENST00000485645 SLC24A4Q8NFF2 622 aa12.5□□□□□ -0.41
SMC4-216ENST00000485645 DCANP1Q8TF63 244 aa12.5□□□□□ -0.41
SMC4-216ENST00000485645 SCGB3A2Q96PL1 93 aa12.5□□□□□ -0.41
SMC4-216ENST00000485645 HELTA6NFD8 242 aa12.49□□□□□ -0.41
SMC4-216ENST00000485645 DEDDO75618 318 aa12.49□□□□□ -0.41
SMC4-216ENST00000485645 HNRNPCP07910 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMC4-216ENST00000485645 SPP1P10451 314 aa12.49□□□□□ -0.41
SMC4-216ENST00000485645 OR10J1P30954 320 aa12.49□□□□□ -0.41
SMC4-216ENST00000485645 RND2P52198 227 aa12.49□□□□□ -0.41
SMC4-216ENST00000485645 YPEL3P61236 119 aaPredicted RBP12.49□□□□□ -0.41
SMC4-216ENST00000485645 DHRS2Q13268 280 aa12.49□□□□□ -0.41
SMC4-216ENST00000485645 ETFRF1Q6IPR1 90 aa12.49□□□□□ -0.41
SMC4-216ENST00000485645 MORN3Q6PF18 240 aaPredicted RBP12.49□□□□□ -0.41
SMC4-216ENST00000485645 C2CD4CQ8TF44 421 aa12.49□□□□□ -0.41
SMC4-216ENST00000485645 DEDD2Q8WXF8 326 aa12.49□□□□□ -0.41
SMC4-216ENST00000485645 CACFD1Q9UGQ2 172 aa12.49□□□□□ -0.41
SMC4-216ENST00000485645 U3KQE9 123 aa12.49□□□□□ -0.41
SMC4-216ENST00000485645 DNAH10Q8IVF4 4471 aa12.49□□□□□ -0.41
SMC4-216ENST00000485645 KNCNA6PVL3 124 aa12.48□□□□□ -0.41
SMC4-216ENST00000485645 GIG44P09565 113 aaPredicted RBP12.48□□□□□ -0.41
SMC4-216ENST00000485645 AP2S1P53680 142 aaPredicted RBP12.48□□□□□ -0.41
SMC4-216ENST00000485645 NOXA1Q86UR1 476 aa12.48□□□□□ -0.41
SMC4-216ENST00000485645 Q8NAQ8 132 aa12.48□□□□□ -0.41
SMC4-216ENST00000485645 SRRQ9GZT4 340 aa12.48□□□□□ -0.41
SMC4-216ENST00000485645 KCNIP3Q9Y2W7 256 aa12.48□□□□□ -0.41
SMC4-216ENST00000485645 TMEM56-RWDD3S4R434 201 aa12.48□□□□□ -0.41
SMC4-216ENST00000485645 VPS13DQ5THJ4 4388 aa12.48□□□□□ -0.41
SMC4-216ENST00000485645 NXPH3O95157 252 aa12.47□□□□□ -0.41
SMC4-216ENST00000485645 SULT1A3P0DMM9 295 aa12.47□□□□□ -0.41
SMC4-216ENST00000485645 SULT1A4P0DMN0 295 aa12.47□□□□□ -0.41
SMC4-216ENST00000485645 NPY1RP25929 384 aa12.47□□□□□ -0.41
SMC4-216ENST00000485645 TCTAP57738 103 aa12.47□□□□□ -0.41
SMC4-216ENST00000485645 ACTL10Q5JWF8 245 aa12.47□□□□□ -0.41
SMC4-216ENST00000485645 C16orf54Q6UWD8 224 aa12.47□□□□□ -0.41
SMC4-216ENST00000485645 GLMPQ8WWB7 406 aa12.47□□□□□ -0.41
SMC4-216ENST00000485645 IL22RA2Q969J5 263 aa12.47□□□□□ -0.41
SMC4-216ENST00000485645 HRH4Q9H3N8 390 aa12.47□□□□□ -0.41
SMC4-216ENST00000485645 IGHV4-28A0A0C4DH34 117 aa12.46□□□□□ -0.41
SMC4-216ENST00000485645 IL4P05112 153 aa12.46□□□□□ -0.41
SMC4-216ENST00000485645 MIFP14174 115 aa12.46□□□□□ -0.41
SMC4-216ENST00000485645 TMEM170AQ8WVE7 144 aa12.46□□□□□ -0.41
SMC4-216ENST00000485645 NPIPB3Q92617 1050 aa12.46□□□□□ -0.41
SMC4-216ENST00000485645 ZNF705EA8MWA4 302 aaPredicted RBP12.45□□□□□ -0.42
SMC4-216ENST00000485645 C11orf94C9JXX5 98 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms