RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 RND2P52198 227 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 YPEL3P61236 119 aaPredicted RBP6.34□□□□□ -1.39
SF3A1-208ENST00000485618 DEFA5Q01523 94 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 PRSS54Q6PEW0 395 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 THAP6Q8TBB0 222 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 C20orf24Q9BUV8 137 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 ZNF436Q9C0F3 470 aaPredicted RBP6.34□□□□□ -1.39
SF3A1-208ENST00000485618 TMEM231Q9H6L2 316 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 DAZ1Q9NQZ3 744 aaKnown RBP6.34□□□□□ -1.39
SF3A1-208ENST00000485618 ZC4H2Q9NQZ6 224 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 MRPL27Q9P0M9 148 aaKnown RBP6.34□□□□□ -1.39
SF3A1-208ENST00000485618 RNF24Q9Y225 148 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 RCL1Q9Y2P8 373 aaKnown RBP6.34□□□□□ -1.39
SF3A1-208ENST00000485618 S4R3C0 116 aa6.34□□□□□ -1.39
SF3A1-208ENST00000485618 TRAV14DV4A0A0A6YYC5 116 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 G3V4G9 280 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 H3BP45 60 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 DEDDO75618 318 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 TRBV12-3P01733 135 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 IGHV3-48P01763 117 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 PRB2P02812 416 aaPredicted RBP6.33□□□□□ -1.4
SF3A1-208ENST00000485618 NPPCP23582 126 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 P2RY1P47900 373 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 EIF2B2P49770 351 aaKnown RBP6.33□□□□□ -1.4
SF3A1-208ENST00000485618 AKR1C1Q04828 323 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 BAXQ07812 192 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 RAB32Q13637 225 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 ATP6V1FQ16864 119 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 BEAN1Q3B7T3 259 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 LAMTOR1Q6IAA8 161 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 OR8G2PQ6IF36 304 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 TMEM14EPQ6UXP3 125 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 OR2K2Q8NGT1 345 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 NPIPB3Q92617 1050 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 GRAMD2BQ96HH9 432 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 METTL26Q96S19 204 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 NPVFQ9HCQ7 196 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 LYRM2Q9NU23 88 aaPredicted RBP6.33□□□□□ -1.4
SF3A1-208ENST00000485618 CMYA5Q8N3K9 4069 aa6.33□□□□□ -1.4
SF3A1-208ENST00000485618 SMCO3A2RU48 225 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 A8MWP6 167 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 SIX6O95475 246 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 GIPP09681 153 aaPredicted RBP6.32□□□□□ -1.4
SF3A1-208ENST00000485618 METTL15P1P0C7V9 234 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 FOLR2P14207 255 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 CBLN1P23435 193 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 SULT1A1P50225 295 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 RAP2BP61225 183 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 RRAS2P62070 204 aaPredicted RBP6.32□□□□□ -1.4
SF3A1-208ENST00000485618 SELENOTP62341 195 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 DLK1P80370 383 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 GAMTQ14353 236 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 LRRC37A5PQ49AS3 106 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 OXLD1Q5BKU9 147 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 LCN12Q6JVE5 192 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 RBPMS2Q6ZRY4 209 aaKnown RBP6.32□□□□□ -1.4
SF3A1-208ENST00000485618 TMEM144Q7Z5S9 345 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 LILRB2Q8N423 598 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 PPP1R1CQ8WVI7 109 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 TMEM190Q8WZ59 177 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 CHRDL1Q9BU40 450 aa6.32□□□□□ -1.4
SF3A1-208ENST00000485618 FNDC4Q9H6D8 234 aaPredicted RBP6.32□□□□□ -1.4
SF3A1-208ENST00000485618 PUS1Q9Y606 427 aaKnown RBP eCLIP6.32□□□□□ -1.4
SF3A1-208ENST00000485618 BIRC6Q9NR09 4857 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 TRAV25A0A0B4J276 109 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 IGHV3-35A0A0C4DH35 117 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 C2orf70A6NJV1 201 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 MPDU1O75352 247 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 DFFBO76075 338 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 MPC2O95563 127 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 CSN3P07498 182 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 IGLC1P0CG04 106 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 ADMP35318 185 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 PAX9P55771 341 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 CMC4P56277 68 aaPredicted RBP6.31□□□□□ -1.4
SF3A1-208ENST00000485618 H2BFSP57053 126 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 PAFAH1B2P68402 229 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 IL15RAQ13261 267 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 MLANAQ16655 118 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 SAMD5Q5TGI4 173 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 TEPPQ6URK8 271 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 TOMM20LQ6UXN7 152 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 ACOT7LQ6ZUV0 252 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 INO80EQ8NBZ0 244 aaPredicted RBP6.31□□□□□ -1.4
SF3A1-208ENST00000485618 BPIFCQ8NFQ6 507 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 OR51G1Q8NGK1 321 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 TMEM170AQ8WVE7 144 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 TRGV9Q99603 122 aa6.31□□□□□ -1.4
SF3A1-208ENST00000485618 SORL1Q92673 2214 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 F8W735 103 aaPredicted RBP6.3□□□□□ -1.4
SF3A1-208ENST00000485618 CST7O76096 145 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 TOMM40O96008 361 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 IGKV1-17P01599 117 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 AP2S1P53680 142 aaPredicted RBP6.3□□□□□ -1.4
SF3A1-208ENST00000485618 SLC38A11Q08AI6 406 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 FCN2Q15485 313 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 TIGITQ495A1 244 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 TM4SF20Q53R12 229 aa6.3□□□□□ -1.4
SF3A1-208ENST00000485618 KPRPQ5T749 579 aaPredicted RBP6.3□□□□□ -1.4
SF3A1-208ENST00000485618 PXDC1Q5TGL8 231 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms