RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 C11orf45Q8TAV5 145 aa7.72□□□□□ -1.17
HMGN1-215ENST00000485550 GLYATL2Q8WU03 294 aa7.72□□□□□ -1.17
HMGN1-215ENST00000485550 GPR146Q96CH1 333 aa7.72□□□□□ -1.17
HMGN1-215ENST00000485550 METTL26Q96S19 204 aa7.72□□□□□ -1.17
HMGN1-215ENST00000485550 KRTAP4-12Q9BQ66 201 aa7.72□□□□□ -1.17
HMGN1-215ENST00000485550 SSBP4Q9BWG4 385 aaPredicted RBP7.72□□□□□ -1.17
HMGN1-215ENST00000485550 TMEM222Q9H0R3 208 aa7.72□□□□□ -1.17
HMGN1-215ENST00000485550 TMEM231Q9H6L2 316 aa7.72□□□□□ -1.17
HMGN1-215ENST00000485550 HEYLQ9NQ87 328 aaPredicted RBP7.72□□□□□ -1.17
HMGN1-215ENST00000485550 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.72□□□□□ -1.17
HMGN1-215ENST00000485550 PRR13Q9NZ81 148 aa7.72□□□□□ -1.17
HMGN1-215ENST00000485550 C14orf166Q9Y224 244 aaKnown RBP7.72□□□□□ -1.17
HMGN1-215ENST00000485550 A0A1W2PS18 150 aa7.71□□□□□ -1.18
HMGN1-215ENST00000485550 KNCNA6PVL3 124 aa7.71□□□□□ -1.18
HMGN1-215ENST00000485550 DISC1C4P0D8 188 aa7.71□□□□□ -1.18
HMGN1-215ENST00000485550 GABARAPH6UMI1 98 aa7.71□□□□□ -1.18
HMGN1-215ENST00000485550 CDS2O95674 445 aa7.71□□□□□ -1.18
HMGN1-215ENST00000485550 IGKV1-17P01599 117 aa7.71□□□□□ -1.18
HMGN1-215ENST00000485550 ZNF688P0C7X2 276 aa7.71□□□□□ -1.18
HMGN1-215ENST00000485550 RPL5P46777 297 aaKnown RBP7.71□□□□□ -1.18
HMGN1-215ENST00000485550 P2RY1P47900 373 aa7.71□□□□□ -1.18
HMGN1-215ENST00000485550 SPCS3P61009 180 aa7.71□□□□□ -1.18
HMGN1-215ENST00000485550 RBMS2Q15434 407 aaKnown RBP7.71□□□□□ -1.18
HMGN1-215ENST00000485550 TMEM268Q5VZI3 342 aa7.71□□□□□ -1.18
HMGN1-215ENST00000485550 C15orf40Q8WUR7 153 aa7.71□□□□□ -1.18
HMGN1-215ENST00000485550 NAA60Q9H7X0 242 aa7.71□□□□□ -1.18
HMGN1-215ENST00000485550 CACNG5Q9UF02 275 aa7.71□□□□□ -1.18
HMGN1-215ENST00000485550 A0A1B0GVY2 172 aa7.7□□□□□ -1.18
HMGN1-215ENST00000485550 CEBPZOSA8MTT3 80 aa7.7□□□□□ -1.18
HMGN1-215ENST00000485550 IFNA4P05014 189 aa7.7□□□□□ -1.18
HMGN1-215ENST00000485550 CRYBB3P26998 211 aa7.7□□□□□ -1.18
HMGN1-215ENST00000485550 RND2P52198 227 aa7.7□□□□□ -1.18
HMGN1-215ENST00000485550 IL18Q14116 193 aa7.7□□□□□ -1.18
HMGN1-215ENST00000485550 BSXQ3C1V8 233 aa7.7□□□□□ -1.18
HMGN1-215ENST00000485550 PRSS54Q6PEW0 395 aa7.7□□□□□ -1.18
HMGN1-215ENST00000485550 GPR141Q7Z602 305 aa7.7□□□□□ -1.18
HMGN1-215ENST00000485550 FAM219AQ8IW50 185 aa7.7□□□□□ -1.18
HMGN1-215ENST00000485550 OR51S1Q8NGJ8 323 aa7.7□□□□□ -1.18
HMGN1-215ENST00000485550 OR4C16Q8NGL9 310 aa7.7□□□□□ -1.18
HMGN1-215ENST00000485550 RBPMSQ93062 196 aaKnown RBP7.7□□□□□ -1.18
HMGN1-215ENST00000485550 DIRAS2Q96HU8 199 aa7.7□□□□□ -1.18
HMGN1-215ENST00000485550 GPR132Q9UNW8 380 aa7.7□□□□□ -1.18
HMGN1-215ENST00000485550 TRAV30A0A087WSZ9 112 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 TRAV2A0A0B4J234 112 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 RPS10-NUDT3A0A1W2PQS6 291 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 K7EQG2 157 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 SCGB2A1O75556 95 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 B3GALNT1O75752 331 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 IGLC1P0CG04 106 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 AKAIN1P0CW23 69 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 OR10J1P30954 320 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 HTR2BP41595 481 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 MRPS10P82664 201 aaKnown RBP7.69□□□□□ -1.18
HMGN1-215ENST00000485550 DHODHQ02127 395 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 DHRS2Q13268 280 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 C2orf83Q53S99 150 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 ACTL10Q5JWF8 245 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 CLVS1Q8IUQ0 354 aaPredicted RBP7.69□□□□□ -1.18
HMGN1-215ENST00000485550 OR52E5Q8NH55 327 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 Q8WTZ3 238 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 TMEM170AQ8WVE7 144 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 SMIM4Q8WVI0 70 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 GRAMD2BQ96HH9 432 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 NARS2Q96I59 477 aaKnown RBP7.69□□□□□ -1.18
HMGN1-215ENST00000485550 MRPS26Q9BYN8 205 aaKnown RBP7.69□□□□□ -1.18
HMGN1-215ENST00000485550 MFFQ9GZY8 342 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 C11orf68Q9H3H3 251 aaKnown RBP7.69□□□□□ -1.18
HMGN1-215ENST00000485550 CLEC5AQ9NY25 188 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 DNAH17Q9UFH2 4485 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 FAT2Q9NYQ8 4349 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 DNAH2Q9P225 4427 aa7.69□□□□□ -1.18
HMGN1-215ENST00000485550 IGHV4-28A0A0C4DH34 117 aa7.68□□□□□ -1.18
HMGN1-215ENST00000485550 CRYM-AS1A6NIL9 109 aa7.68□□□□□ -1.18
HMGN1-215ENST00000485550 GIG44P09565 113 aaPredicted RBP7.68□□□□□ -1.18
HMGN1-215ENST00000485550 ALDH3B2P48448 385 aa7.68□□□□□ -1.18
HMGN1-215ENST00000485550 SSBP1Q04837 148 aaKnown RBP7.68□□□□□ -1.18
HMGN1-215ENST00000485550 AARDQ4LEZ3 155 aa7.68□□□□□ -1.18
HMGN1-215ENST00000485550 PSMG4Q5JS54 123 aa7.68□□□□□ -1.18
HMGN1-215ENST00000485550 LINC00336Q6ZUF6 198 aa7.68□□□□□ -1.18
HMGN1-215ENST00000485550 TRPT1Q86TN4 253 aaKnown RBP7.68□□□□□ -1.18
HMGN1-215ENST00000485550 SLC24A4Q8NFF2 622 aa7.68□□□□□ -1.18
HMGN1-215ENST00000485550 OR1S2Q8NGQ3 325 aa7.68□□□□□ -1.18
HMGN1-215ENST00000485550 DCANP1Q8TF63 244 aa7.68□□□□□ -1.18
HMGN1-215ENST00000485550 NPIPB3Q92617 1050 aa7.68□□□□□ -1.18
HMGN1-215ENST00000485550 ACY3Q96HD9 319 aa7.68□□□□□ -1.18
HMGN1-215ENST00000485550 DYNC1H1Q14204 4646 aaKnown RBP7.68□□□□□ -1.18
HMGN1-215ENST00000485550 A6NHS1 94 aa7.67□□□□□ -1.18
HMGN1-215ENST00000485550 IGLL5B9A064 214 aa7.67□□□□□ -1.18
HMGN1-215ENST00000485550 IFNA10P01566 189 aa7.67□□□□□ -1.18
HMGN1-215ENST00000485550 IL4P05112 153 aa7.67□□□□□ -1.18
HMGN1-215ENST00000485550 HNRNPCP07910 306 aaKnown RBP eCLIP7.67□□□□□ -1.185e-6■■■□□ 18.1
HMGN1-215ENST00000485550 RBMY1A1P0DJD3 496 aaKnown RBP7.67□□□□□ -1.18
HMGN1-215ENST00000485550 RBMY1CP0DJD4 496 aa7.67□□□□□ -1.18
HMGN1-215ENST00000485550 AKR1C4P17516 323 aa7.67□□□□□ -1.18
HMGN1-215ENST00000485550 C4BPBP20851 252 aa7.67□□□□□ -1.18
HMGN1-215ENST00000485550 NPY1RP25929 384 aa7.67□□□□□ -1.18
HMGN1-215ENST00000485550 RBMY1FQ15415 496 aaKnown RBP7.67□□□□□ -1.18
HMGN1-215ENST00000485550 SURF2Q15527 256 aaPredicted RBP7.67□□□□□ -1.18
HMGN1-215ENST00000485550 USF2Q15853 346 aaPredicted RBP7.67□□□□□ -1.18
HMGN1-215ENST00000485550 LCE3BQ5TA77 95 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms