RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 ZNF331Q9NQX6 463 aaPredicted RBP4.11□□□□□ -1.75
CCDC39-205ENST00000485055 MSRB1Q9NZV6 116 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 ERG28Q9UKR5 140 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 ZFP30Q9Y2G7 519 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 FBXO7Q9Y3I1 522 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 ACANP16112 2415 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 GGT3PA6NGU5 568 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 GGCTO75223 188 aaKnown RBP4.11□□□□□ -1.75
CCDC39-205ENST00000485055 ARL6IP5O75915 188 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 SEC61A1P61619 476 aaKnown RBP4.11□□□□□ -1.75
CCDC39-205ENST00000485055 NHLRC3Q5JS37 347 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 AKR1C8PQ5T2L2 129 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 LYPD2Q6UXB3 125 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 C9orf62Q8N4C0 152 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 CHST4Q8NCG5 386 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 OR8B12Q8NGG6 310 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 THEM6Q8WUY1 208 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 SECTM1Q8WVN6 248 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 PP6455Q8WZ26 134 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 ZNRD1Q9P1U0 126 aa4.11□□□□□ -1.75
CCDC39-205ENST00000485055 NAV3Q8IVL0 2385 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 ZANQ9Y493 2812 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 C5orf63A6NC05 138 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 M0R143 59 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 HPRT1P00492 218 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 IGHA1P01876 353 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 SNRPCP09234 159 aaKnown RBP4.1□□□□□ -1.75
CCDC39-205ENST00000485055 ZBTB25P24278 435 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 NPY1RP25929 384 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 C1orf194Q5T5A4 169 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 ZFAND6Q6FIF0 208 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 LRRC29Q8WV35 223 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 SLC7A6Q92536 515 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 AMELYQ99218 206 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 SPANXA1Q9NS26 97 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 SSR3Q9UNL2 185 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 NIPBLQ6KC79 2804 aaeCLIP4.1□□□□□ -1.75
CCDC39-205ENST00000485055 hADV38S2A0JD32 116 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 CLPSL1A2RUU4 121 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 LEUTXA8MZ59 168 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 OOSP1A8MZH6 123 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 FGF7P21781 194 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 CA6P23280 308 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 RFX2P48378 723 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 PROK1P58294 105 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 ZNF146Q15072 292 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 MINOS1Q5TGZ0 78 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 OLFML2AQ68BL7 652 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 HRCT1Q6UXD1 115 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 ACP7Q6ZNF0 438 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 FAM57BQ71RH2 274 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 ARL11Q969Q4 196 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 ZC2HC1AQ96GY0 325 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 GPR82Q96P67 336 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 NAA38Q9BRA0 125 aaKnown RBP4.1□□□□□ -1.75
CCDC39-205ENST00000485055 SNHG12Q9BXW3 62 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 PBOV1Q9GZY1 135 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 LYRM2Q9NU23 88 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-205ENST00000485055 MINOS1-NBL1R4GNA1 71 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 MXRA5Q9NR99 2828 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 CMYA5Q8N3K9 4069 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 DOCK11Q5JSL3 2073 aa4.1□□□□□ -1.75
CCDC39-205ENST00000485055 IGKV1D-17A0A075B6S4 117 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 IGLV9-49A0A0B4J1Y8 123 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 ZNF670-ZNF695F2Z2N8 137 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 J3KT08 172 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 CDK2AP2O75956 126 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 BLVRBP30043 206 aaPredicted RBP4.09□□□□□ -1.75
CCDC39-205ENST00000485055 TAS2R30P59541 319 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 FGF12P61328 243 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 SRSF9Q13242 221 aaKnown RBP eCLIP4.09□□□□□ -1.75
CCDC39-205ENST00000485055 RHEBQ15382 184 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 CDNFQ49AH0 187 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 LRRC10Q5BKY1 277 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 EHFQ9NZC4 300 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 PLA2G2EQ9NZK7 142 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 HSPE1-MOB4S4R3N1 261 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 ZFHX3Q15911 3703 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 TRAV8-4A0A0B4J246 113 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 A0A1B0GXF2 115 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 NDUFB3O43676 98 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 ZNF737O75373 536 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 IFNA17P01571 189 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 ATP5G1P05496 136 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 MYCNOSP40205 109 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 ERVFC1-1P60608 527 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 SCGB2B2Q4G0G5 96 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 WDR38Q5JTN6 314 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 LINC00596Q86U02 117 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 LINC01551Q86U37 167 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 PACRGLQ8N7B6 248 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 TMEM126AQ9H061 195 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 KLK11Q9UBX7 282 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 AP4S1Q9Y587 144 aa4.09□□□□□ -1.75
CCDC39-205ENST00000485055 K7N7A8 449 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 OR7C2O60412 319 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 CGB3P0DN86 165 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 CGB7P0DN87 165 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 IGHV4-38-2P0DP08 117 aa4.08□□□□□ -1.76
CCDC39-205ENST00000485055 RND3P61587 244 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms