RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 SLC25A4P12235 298 aa12.18□□□□□ -0.46
DDR1-246ENST00000485023 MZT2BQ6NZ67 158 aa12.18□□□□□ -0.46
DDR1-246ENST00000485023 NPIPB3Q92617 1050 aa12.18□□□□□ -0.46
DDR1-246ENST00000485023 OR10C1Q96KK4 312 aa12.18□□□□□ -0.46
DDR1-246ENST00000485023 RNF2Q99496 336 aa12.18□□□□□ -0.46
DDR1-246ENST00000485023 GINS3Q9BRX5 216 aa12.18□□□□□ -0.46
DDR1-246ENST00000485023 OR11H12B2RN74 326 aa12.17□□□□□ -0.46
DDR1-246ENST00000485023 CHEK1O14757 476 aa12.17□□□□□ -0.46
DDR1-246ENST00000485023 MED6O75586 246 aa12.17□□□□□ -0.46
DDR1-246ENST00000485023 IGKV1-17P01599 117 aa12.17□□□□□ -0.46
DDR1-246ENST00000485023 APOHP02749 345 aaPredicted RBP12.17□□□□□ -0.46
DDR1-246ENST00000485023 H2AFB2P0C5Z0 115 aa12.17□□□□□ -0.46
DDR1-246ENST00000485023 IGLC1P0CG04 106 aa12.17□□□□□ -0.46
DDR1-246ENST00000485023 OR10J1P30954 320 aa12.17□□□□□ -0.46
DDR1-246ENST00000485023 ASAH1Q13510 395 aa12.17□□□□□ -0.46
DDR1-246ENST00000485023 ETFRF1Q6IPR1 90 aa12.17□□□□□ -0.46
DDR1-246ENST00000485023 MITD1Q8WV92 249 aa12.17□□□□□ -0.46
DDR1-246ENST00000485023 C19orf73Q9NVV2 129 aa12.17□□□□□ -0.46
DDR1-246ENST00000485023 TRAV30A0A087WSZ9 112 aa12.16□□□□□ -0.46
DDR1-246ENST00000485023 TRAV25A0A0B4J276 109 aa12.16□□□□□ -0.46
DDR1-246ENST00000485023 SSSCA1O60232 199 aa12.16□□□□□ -0.46
DDR1-246ENST00000485023 NKX2-1P43699 371 aaPredicted RBP12.16□□□□□ -0.46
DDR1-246ENST00000485023 TFPI2P48307 235 aa12.16□□□□□ -0.46
DDR1-246ENST00000485023 POLR2GP62487 172 aaKnown RBP eCLIP12.16□□□□□ -0.46
DDR1-246ENST00000485023 RAB11AP62491 216 aa12.16□□□□□ -0.46
DDR1-246ENST00000485023 IFITM3Q01628 133 aa12.16□□□□□ -0.46
DDR1-246ENST00000485023 IAH1Q2TAA2 248 aaPredicted RBP12.16□□□□□ -0.46
DDR1-246ENST00000485023 SPANXN5Q5MJ07 72 aa12.16□□□□□ -0.46
DDR1-246ENST00000485023 LAMTOR1Q6IAA8 161 aa12.16□□□□□ -0.46
DDR1-246ENST00000485023 OR1S2Q8NGQ3 325 aa12.16□□□□□ -0.46
DDR1-246ENST00000485023 ENKURQ8TC29 256 aa12.16□□□□□ -0.46
DDR1-246ENST00000485023 ST8SIA2Q92186 375 aa12.16□□□□□ -0.46
DDR1-246ENST00000485023 SRD5A3Q9H8P0 318 aa12.16□□□□□ -0.46
DDR1-246ENST00000485023 GSKIPQ9P0R6 139 aa12.16□□□□□ -0.46
DDR1-246ENST00000485023 UBQLN2Q9UHD9 624 aa12.16□□□□□ -0.46
DDR1-246ENST00000485023 COL7A1Q02388 2944 aa12.15□□□□□ -0.46
DDR1-246ENST00000485023 HUWE1Q7Z6Z7 4374 aaKnown RBP12.15□□□□□ -0.46
DDR1-246ENST00000485023 FAM25EA8MYX2 175 aa12.15□□□□□ -0.46
DDR1-246ENST00000485023 NHLRC4P0CG21 123 aaPredicted RBP12.15□□□□□ -0.46
DDR1-246ENST00000485023 OR4D5Q8NGN0 318 aa12.15□□□□□ -0.46
DDR1-246ENST00000485023 SLC35E1Q96K37 410 aa12.15□□□□□ -0.46
DDR1-246ENST00000485023 CIB3Q96Q77 187 aaPredicted RBP12.15□□□□□ -0.46
DDR1-246ENST00000485023 SPAG8Q99932 426 aaPredicted RBP12.15□□□□□ -0.46
DDR1-246ENST00000485023 U3KQK5 164 aa12.15□□□□□ -0.46
DDR1-246ENST00000485023 A8MZ25 164 aa12.14□□□□□ -0.47
DDR1-246ENST00000485023 TSPAN4O14817 238 aa12.14□□□□□ -0.47
DDR1-246ENST00000485023 TCF24Q7RTU0 167 aa12.14□□□□□ -0.47
DDR1-246ENST00000485023 GBGT1Q8N5D6 347 aa12.14□□□□□ -0.47
DDR1-246ENST00000485023 ZNF431Q8TF32 576 aaPredicted RBP12.14□□□□□ -0.47
DDR1-246ENST00000485023 METTL26Q96S19 204 aa12.14□□□□□ -0.47
DDR1-246ENST00000485023 ZFP92A6NM28 416 aa12.13□□□□□ -0.47
DDR1-246ENST00000485023 ATP5IP56385 69 aaPredicted RBP12.13□□□□□ -0.47
DDR1-246ENST00000485023 ID3Q02535 119 aa12.13□□□□□ -0.47
DDR1-246ENST00000485023 GAMTQ14353 236 aa12.13□□□□□ -0.47
DDR1-246ENST00000485023 LILRB2Q8N423 598 aa12.13□□□□□ -0.47
DDR1-246ENST00000485023 C12orf45Q8N5I9 185 aaPredicted RBP12.13□□□□□ -0.47
DDR1-246ENST00000485023 ZBTB8BQ8NAP8 495 aaPredicted RBP12.13□□□□□ -0.47
DDR1-246ENST00000485023 Q8WTZ3 238 aa12.13□□□□□ -0.47
DDR1-246ENST00000485023 STRAPQ9Y3F4 350 aaKnown RBP12.13□□□□□ -0.47
DDR1-246ENST00000485023 OR4C46A6NHA9 309 aa12.12□□□□□ -0.47
DDR1-246ENST00000485023 IL4P05112 153 aa12.12□□□□□ -0.47
DDR1-246ENST00000485023 NPPCP23582 126 aa12.12□□□□□ -0.47
DDR1-246ENST00000485023 BMI1P35226 326 aa12.12□□□□□ -0.47
DDR1-246ENST00000485023 GPX4P36969 197 aaPredicted RBP12.12□□□□□ -0.47
DDR1-246ENST00000485023 YPEL3P61236 119 aaPredicted RBP12.12□□□□□ -0.47
DDR1-246ENST00000485023 RPL11P62913 178 aaKnown RBP12.12□□□□□ -0.47
DDR1-246ENST00000485023 RPP30P78346 268 aaKnown RBP12.12□□□□□ -0.47
DDR1-246ENST00000485023 HAGHQ16775 308 aa12.12□□□□□ -0.47
DDR1-246ENST00000485023 NRARPQ7Z6K4 114 aa12.12□□□□□ -0.47
DDR1-246ENST00000485023 WFDC3Q8IUB2 231 aa12.12□□□□□ -0.47
DDR1-246ENST00000485023 RCHY1Q96PM5 261 aa12.12□□□□□ -0.47
DDR1-246ENST00000485023 PSENENQ9NZ42 101 aa12.12□□□□□ -0.47
DDR1-246ENST00000485023 RBMY1BA6NDE4 496 aaKnown RBP12.11□□□□□ -0.47
DDR1-246ENST00000485023 C5orf51A6NDU8 294 aa12.11□□□□□ -0.47
DDR1-246ENST00000485023 RBMY1EA6NEQ0 496 aaKnown RBP12.11□□□□□ -0.47
DDR1-246ENST00000485023 DFFBO76075 338 aa12.11□□□□□ -0.47
DDR1-246ENST00000485023 TOMM40O96008 361 aa12.11□□□□□ -0.47
DDR1-246ENST00000485023 RBMY1DP0C7P1 496 aaKnown RBP12.11□□□□□ -0.47
DDR1-246ENST00000485023 RD3LP0DJH9 198 aa12.11□□□□□ -0.47
DDR1-246ENST00000485023 PSG1P11464 419 aa12.11□□□□□ -0.47
DDR1-246ENST00000485023 ZNF90Q03938 601 aa12.11□□□□□ -0.47
DDR1-246ENST00000485023 USF2Q15853 346 aaPredicted RBP12.11□□□□□ -0.47
DDR1-246ENST00000485023 PBDC1Q9BVG4 233 aa12.11□□□□□ -0.47
DDR1-246ENST00000485023 VSIRQ9H7M9 311 aa12.11□□□□□ -0.47
DDR1-246ENST00000485023 ZMAT4Q9H898 229 aa12.11□□□□□ -0.47
DDR1-246ENST00000485023 RETNQ9HD89 108 aa12.11□□□□□ -0.47
DDR1-246ENST00000485023 NBEAL2Q6ZNJ1 2754 aa12.1□□□□□ -0.47
DDR1-246ENST00000485023 IGKV1D-37A0A075B6S9 117 aa12.1□□□□□ -0.47
DDR1-246ENST00000485023 CCNKO75909 580 aa12.1□□□□□ -0.47
DDR1-246ENST00000485023 CRYBB3P26998 211 aa12.1□□□□□ -0.47
DDR1-246ENST00000485023 P2RY1P47900 373 aa12.1□□□□□ -0.47
DDR1-246ENST00000485023 OR2F1Q13607 317 aa12.1□□□□□ -0.47
DDR1-246ENST00000485023 ODF3L2Q3SX64 289 aa12.1□□□□□ -0.47
DDR1-246ENST00000485023 FAM90A2PQ658T7 463 aa12.1□□□□□ -0.47
DDR1-246ENST00000485023 OR8G2PQ6IF36 304 aa12.1□□□□□ -0.47
DDR1-246ENST00000485023 ACOT7LQ6ZUV0 252 aa12.1□□□□□ -0.47
DDR1-246ENST00000485023 OR51G1Q8NGK1 321 aa12.1□□□□□ -0.47
DDR1-246ENST00000485023 NARS2Q96I59 477 aaKnown RBP12.1□□□□□ -0.47
DDR1-246ENST00000485023 CITED4Q96RK1 184 aa12.1□□□□□ -0.47
DDR1-246ENST00000485023 TM2D3Q9BRN9 247 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms