RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 RAB11AP62491 216 aa14.38□□□□□ -0.11
SNX17-206ENST00000484886 RPP30P78346 268 aaKnown RBP14.38□□□□□ -0.11
SNX17-206ENST00000484886 OR1S2Q8NGQ3 325 aa14.38□□□□□ -0.11
SNX17-206ENST00000484886 ZNF414Q96IQ9 312 aa14.38□□□□□ -0.11
SNX17-206ENST00000484886 MPTX1A8MV57 137 aa14.37□□□□□ -0.11
SNX17-206ENST00000484886 OR11H12B2RN74 326 aa14.37□□□□□ -0.11
SNX17-206ENST00000484886 H2AFB2P0C5Z0 115 aa14.37□□□□□ -0.11
SNX17-206ENST00000484886 DEFB125Q8N687 156 aa14.37□□□□□ -0.11
SNX17-206ENST00000484886 NPIPB3Q92617 1050 aa14.37□□□□□ -0.11
SNX17-206ENST00000484886 SPAG8Q99932 426 aaPredicted RBP14.37□□□□□ -0.11
SNX17-206ENST00000484886 WFDC10AQ9H1F0 79 aa14.37□□□□□ -0.11
SNX17-206ENST00000484886 TBC1D24Q9ULP9 559 aa14.37□□□□□ -0.11
SNX17-206ENST00000484886 U3KQK5 164 aa14.37□□□□□ -0.11
SNX17-206ENST00000484886 CHEK1O14757 476 aa14.36□□□□□ -0.11
SNX17-206ENST00000484886 UPK1BO75841 260 aa14.36□□□□□ -0.11
SNX17-206ENST00000484886 IGKV1-17P01599 117 aa14.36□□□□□ -0.11
SNX17-206ENST00000484886 ASAH1Q13510 395 aa14.36□□□□□ -0.11
SNX17-206ENST00000484886 ENKURQ8TC29 256 aa14.36□□□□□ -0.11
SNX17-206ENST00000484886 MITD1Q8WV92 249 aa14.36□□□□□ -0.11
SNX17-206ENST00000484886 SLC35E1Q96K37 410 aa14.36□□□□□ -0.11
SNX17-206ENST00000484886 RNF2Q99496 336 aa14.36□□□□□ -0.11
SNX17-206ENST00000484886 SRD5A3Q9H8P0 318 aa14.36□□□□□ -0.11
SNX17-206ENST00000484886 ZFAND3Q9H8U3 227 aa14.36□□□□□ -0.11
SNX17-206ENST00000484886 C19orf73Q9NVV2 129 aa14.36□□□□□ -0.11
SNX17-206ENST00000484886 IGKV3-7A0A075B6H7 116 aa14.35□□□□□ -0.11
SNX17-206ENST00000484886 IGHV3-66A0A0C4DH42 116 aa14.35□□□□□ -0.11
SNX17-206ENST00000484886 A8MZ25 164 aa14.35□□□□□ -0.11
SNX17-206ENST00000484886 TSPAN4O14817 238 aa14.35□□□□□ -0.11
SNX17-206ENST00000484886 SCGB1D2O95969 90 aa14.35□□□□□ -0.11
SNX17-206ENST00000484886 IGLC1P0CG04 106 aa14.35□□□□□ -0.11
SNX17-206ENST00000484886 NPPCP23582 126 aa14.35□□□□□ -0.11
SNX17-206ENST00000484886 NKX2-1P43699 371 aaPredicted RBP14.35□□□□□ -0.11
SNX17-206ENST00000484886 IAH1Q2TAA2 248 aaPredicted RBP14.35□□□□□ -0.11
SNX17-206ENST00000484886 Q8WTZ3 238 aa14.35□□□□□ -0.11
SNX17-206ENST00000484886 METTL26Q96S19 204 aa14.35□□□□□ -0.11
SNX17-206ENST00000484886 SEC22CQ9BRL7 303 aa14.35□□□□□ -0.11
SNX17-206ENST00000484886 ZMAT4Q9H898 229 aa14.35□□□□□ -0.11
SNX17-206ENST00000484886 GSKIPQ9P0R6 139 aa14.35□□□□□ -0.11
SNX17-206ENST00000484886 OR4C46A6NHA9 309 aa14.34□□□□□ -0.11
SNX17-206ENST00000484886 FAM25EA8MYX2 175 aa14.34□□□□□ -0.11
SNX17-206ENST00000484886 SSSCA1O60232 199 aa14.34□□□□□ -0.11
SNX17-206ENST00000484886 GPX4P36969 197 aaPredicted RBP14.34□□□□□ -0.11
SNX17-206ENST00000484886 POLR2GP62487 172 aaKnown RBP eCLIP14.34□□□□□ -0.11
SNX17-206ENST00000484886 SPANXN5Q5MJ07 72 aa14.34□□□□□ -0.11
SNX17-206ENST00000484886 ST8SIA2Q92186 375 aa14.34□□□□□ -0.11
SNX17-206ENST00000484886 NARS2Q96I59 477 aaKnown RBP14.34□□□□□ -0.11
SNX17-206ENST00000484886 TMEM231Q9H6L2 316 aa14.34□□□□□ -0.11
SNX17-206ENST00000484886 DNAH9Q9NYC9 4486 aa14.34□□□□□ -0.11
SNX17-206ENST00000484886 H3BP45 60 aa14.33□□□□□ -0.12
SNX17-206ENST00000484886 TFPI2P48307 235 aa14.33□□□□□ -0.12
SNX17-206ENST00000484886 YPEL3P61236 119 aaPredicted RBP14.33□□□□□ -0.12
SNX17-206ENST00000484886 RPL11P62913 178 aaKnown RBP14.33□□□□□ -0.12
SNX17-206ENST00000484886 OR4D5Q8NGN0 318 aa14.33□□□□□ -0.12
SNX17-206ENST00000484886 ZNF431Q8TF32 576 aaPredicted RBP14.33□□□□□ -0.12
SNX17-206ENST00000484886 UBQLN2Q9UHD9 624 aa14.33□□□□□ -0.12
SNX17-206ENST00000484886 STRAPQ9Y3F4 350 aaKnown RBP14.33□□□□□ -0.12
SNX17-206ENST00000484886 COL7A1Q02388 2944 aa14.33□□□□□ -0.12
SNX17-206ENST00000484886 ZFP92A6NM28 416 aa14.32□□□□□ -0.12
SNX17-206ENST00000484886 CCSO14618 274 aa14.32□□□□□ -0.12
SNX17-206ENST00000484886 APOHP02749 345 aaPredicted RBP14.32□□□□□ -0.12
SNX17-206ENST00000484886 ID3Q02535 119 aa14.32□□□□□ -0.12
SNX17-206ENST00000484886 GAMTQ14353 236 aa14.32□□□□□ -0.12
SNX17-206ENST00000484886 TCF24Q7RTU0 167 aa14.32□□□□□ -0.12
SNX17-206ENST00000484886 PSENENQ9NZ42 101 aa14.32□□□□□ -0.12
SNX17-206ENST00000484886 A0A1W2PS18 150 aa14.31□□□□□ -0.12
SNX17-206ENST00000484886 IL4P05112 153 aa14.31□□□□□ -0.12
SNX17-206ENST00000484886 RD3LP0DJH9 198 aa14.31□□□□□ -0.12
SNX17-206ENST00000484886 PAFAH1B2P68402 229 aa14.31□□□□□ -0.12
SNX17-206ENST00000484886 HAGHQ16775 308 aa14.31□□□□□ -0.12
SNX17-206ENST00000484886 GBGT1Q8N5D6 347 aa14.31□□□□□ -0.12
SNX17-206ENST00000484886 C12orf45Q8N5I9 185 aaPredicted RBP14.31□□□□□ -0.12
SNX17-206ENST00000484886 ZBTB8BQ8NAP8 495 aaPredicted RBP14.31□□□□□ -0.12
SNX17-206ENST00000484886 RCHY1Q96PM5 261 aa14.31□□□□□ -0.12
SNX17-206ENST00000484886 C5orf51A6NDU8 294 aa14.3□□□□□ -0.12
SNX17-206ENST00000484886 TOMM40O96008 361 aa14.3□□□□□ -0.12
SNX17-206ENST00000484886 CD5P06127 495 aa14.3□□□□□ -0.12
SNX17-206ENST00000484886 GRAMD2BQ96HH9 432 aa14.3□□□□□ -0.12
SNX17-206ENST00000484886 VSIRQ9H7M9 311 aa14.3□□□□□ -0.12
SNX17-206ENST00000484886 DNASE2O00115 360 aaPredicted RBP14.29□□□□□ -0.12
SNX17-206ENST00000484886 DFFBO76075 338 aa14.29□□□□□ -0.12
SNX17-206ENST00000484886 FABP1P07148 127 aa14.29□□□□□ -0.12
SNX17-206ENST00000484886 HNRNPCP07910 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNX17-206ENST00000484886 CRYBB3P26998 211 aa14.29□□□□□ -0.12
SNX17-206ENST00000484886 DEFA1P59665 94 aa14.29□□□□□ -0.12
SNX17-206ENST00000484886 DEFA3P59666 94 aa14.29□□□□□ -0.12
SNX17-206ENST00000484886 IFITM3Q01628 133 aa14.29□□□□□ -0.12
SNX17-206ENST00000484886 WFDC3Q8IUB2 231 aa14.29□□□□□ -0.12
SNX17-206ENST00000484886 SPATA25Q9BR10 227 aa14.29□□□□□ -0.12
SNX17-206ENST00000484886 RBMY1BA6NDE4 496 aaKnown RBP14.28□□□□□ -0.12
SNX17-206ENST00000484886 RBMY1EA6NEQ0 496 aaKnown RBP14.28□□□□□ -0.12
SNX17-206ENST00000484886 RBMY1DP0C7P1 496 aaKnown RBP14.28□□□□□ -0.12
SNX17-206ENST00000484886 PSG1P11464 419 aa14.28□□□□□ -0.12
SNX17-206ENST00000484886 P2RY1P47900 373 aa14.28□□□□□ -0.12
SNX17-206ENST00000484886 AKR1C1Q04828 323 aa14.28□□□□□ -0.12
SNX17-206ENST00000484886 OR8G2PQ6IF36 304 aa14.28□□□□□ -0.12
SNX17-206ENST00000484886 LILRB2Q8N423 598 aa14.28□□□□□ -0.12
SNX17-206ENST00000484886 OR51G1Q8NGK1 321 aa14.28□□□□□ -0.12
SNX17-206ENST00000484886 SMIM8Q96KF7 97 aa14.28□□□□□ -0.12
SNX17-206ENST00000484886 WWC2-AS2Q96NR7 200 aa14.28□□□□□ -0.12
SNX17-206ENST00000484886 TM2D3Q9BRN9 247 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms