RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 GCM1Q9NP62 436 aa9.44□□□□□ -0.9
SEC61A1-205ENST00000483956 DOCK7Q96N67 2140 aa9.44□□□□□ -0.9
SEC61A1-205ENST00000483956 KLRC4-KLRK1H3BQV0 150 aa9.43□□□□□ -0.9
SEC61A1-205ENST00000483956 GRPP07492 148 aa9.43□□□□□ -0.9
SEC61A1-205ENST00000483956 ZNF138P52744 262 aa9.43□□□□□ -0.9
SEC61A1-205ENST00000483956 PLGLB1Q02325 96 aa9.43□□□□□ -0.9
SEC61A1-205ENST00000483956 C3AR1Q16581 482 aa9.43□□□□□ -0.9
SEC61A1-205ENST00000483956 ALKBH6Q3KRA9 238 aa9.43□□□□□ -0.9
SEC61A1-205ENST00000483956 LINC00696Q6ZRV3 163 aa9.43□□□□□ -0.9
SEC61A1-205ENST00000483956 SH2D6Q7Z4S9 175 aa9.43□□□□□ -0.9
SEC61A1-205ENST00000483956 PSG8Q9UQ74 426 aa9.43□□□□□ -0.9
SEC61A1-205ENST00000483956 SPTBN2O15020 2390 aa9.43□□□□□ -0.9
SEC61A1-205ENST00000483956 DNAJC13O75165 2243 aa9.43□□□□□ -0.9
SEC61A1-205ENST00000483956 J3QR89 54 aa9.43□□□□□ -0.9
SEC61A1-205ENST00000483956 AREGP15514 252 aa9.43□□□□□ -0.9
SEC61A1-205ENST00000483956 TM4SF20Q53R12 229 aa9.43□□□□□ -0.9
SEC61A1-205ENST00000483956 TRAT1Q6PIZ9 186 aa9.43□□□□□ -0.9
SEC61A1-205ENST00000483956 C11orf53Q8IXP5 236 aa9.43□□□□□ -0.9
SEC61A1-205ENST00000483956 MRPL16Q9NX20 251 aaKnown RBP9.43□□□□□ -0.9
SEC61A1-205ENST00000483956 ACTL6BO94805 426 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 VDAC2P45880 294 aaPredicted RBP9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 FOXF2Q12947 444 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 LINC01545Q5VT33 79 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 C18orf15Q96N68 181 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 LSM4Q9Y4Z0 139 aaKnown RBP9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 ASPMQ8IZT6 3477 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 WNT9BO14905 357 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 DUTP33316 252 aaKnown RBP9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 PSG5Q15238 335 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 FAM214BQ7L5A3 538 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 CHCHD1Q96BP2 118 aaKnown RBP9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 RNF183Q96D59 192 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 IGF2BP2-AS1Q96M15 143 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 SPRY4Q9C004 299 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 GPR179Q6PRD1 2367 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 PATE3B3GLJ2 98 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 NCR2O95944 276 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 LIPFP07098 398 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 HERV-K104P63124 156 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 MIR17HGQ75NE6 70 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 OR13A1Q8NGR1 328 aa9.42□□□□□ -0.9
SEC61A1-205ENST00000483956 GGTLC3B5MD39 225 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 C15orf65H3BRN8 121 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 KLK10O43240 276 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 INSL3P51460 131 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 LINC00205P59089 165 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 ETDBQ3ZM63 59 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 SNRNP40Q96DI7 357 aaKnown RBP9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 PLPPR2Q96GM1 343 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 LINC00479Q96M42 142 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 VGLL1Q99990 258 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 IGHV3-64DA0A0J9YX35 117 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 KBTBD11-OT1A0A1B0GTJ5 212 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 HIGD1CA8MV81 97 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 SPINT2O43291 252 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 GFRA3O60609 400 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 IGHV3-7P01780 117 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 ACP1P24666 158 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 TIMM23BQ5SRD1 257 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 FAM162BQ5T6X4 162 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 OR4A16Q8NH70 328 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 ARPC1AQ92747 370 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 DUSP13Q9UII6 198 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 FREM2Q5SZK8 3169 aa9.41□□□□□ -0.9
SEC61A1-205ENST00000483956 TRGV8A0A0C4DH27 118 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 OR11H12B2RN74 326 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 SP1P08047 785 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 RTL8BQ17RB0 113 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 OR11H1Q8NG94 326 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 OR11H2Q8NH07 326 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 KLF14Q8TD94 323 aaPredicted RBP9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 C1orf159Q96HA4 380 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 CXXC4Q9H2H0 198 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 OBP2BQ9NPH6 170 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 HEYLQ9NQ87 328 aaPredicted RBP9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 IDI2-AS1Q9NZ38 188 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 HSPB8Q9UJY1 196 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 JPT1Q9UK76 154 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 HCFC1P51610 2035 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 IGHV3-43A0A0B4J1X8 118 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 A1L4Q6 167 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 IGHV3-43DP0DP04 118 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 MPV17P39210 176 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 GPR12P47775 334 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 MEOX1P50221 254 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 ZNF826PQ6ZT77 177 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 MAFAQ8NHW3 353 aaPredicted RBP9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 Q8TCH9 128 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 ABHD17AQ96GS6 310 aa9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 KLF13Q9Y2Y9 288 aaPredicted RBP9.4□□□□□ -0.9
SEC61A1-205ENST00000483956 EP300Q09472 2414 aaPredicted RBP9.4□□□□□ -0.91
SEC61A1-205ENST00000483956 FCGR3BO75015 233 aa9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 PROP1O75360 226 aa9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 INO80CQ6PI98 192 aaPredicted RBP9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 MTURNQ8N3F0 131 aa9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 INSIG2Q9Y5U4 225 aa9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 CUL9Q8IWT3 2517 aa9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 K7ERJ3 54 aa9.39□□□□□ -0.91
SEC61A1-205ENST00000483956 FAM87AP0C7U9 286 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms