RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 LTBP4Q8N2S1 1624 aa2.71□□□□□ -1.98
PTCD3-214ENST00000483925 TRIP11Q15643 1979 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 SVILO95425 2214 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 BICRAQ9NZM4 1560 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 TICRRQ7Z2Z1 1910 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 TRAPPC8Q9Y2L5 1435 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 IGLV4-60A0A075B6I1 120 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 A0A1W2PNU3 283 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-214ENST00000483925 SMIM24O75264 130 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 RNASE4P34096 147 aaKnown RBP2.7□□□□□ -1.98
PTCD3-214ENST00000483925 DYNLT3P51808 116 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 MYL5Q02045 173 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 SLC38A11Q08AI6 406 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 MSMO1Q15800 293 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 DNLZQ5SXM8 178 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 MSRB3Q8IXL7 192 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 TSTD1Q8NFU3 115 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 FGF13Q92913 245 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 MAGOHBQ96A72 148 aaKnown RBP2.7□□□□□ -1.98
PTCD3-214ENST00000483925 IMMP2LQ96T52 175 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 ADAT1Q9BUB4 502 aaKnown RBP2.7□□□□□ -1.98
PTCD3-214ENST00000483925 ZNF471Q9BX82 626 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-214ENST00000483925 RBM7Q9Y580 266 aaKnown RBP2.7□□□□□ -1.98
PTCD3-214ENST00000483925 TIMM9Q9Y5J7 89 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 FAM215AQ9Y5M1 114 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 RALGAPA2Q2PPJ7 1873 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 SCN10AQ9Y5Y9 1956 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 TDRD6O60522 2096 aaKnown RBP2.7□□□□□ -1.98
PTCD3-214ENST00000483925 KIF13BQ9NQT8 1826 aa2.7□□□□□ -1.98
PTCD3-214ENST00000483925 AGRNO00468 2067 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 ANKRD12Q6UB98 2062 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 TRGV5A0A0B4J1U4 118 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 IGHV1-58A0A0C4DH39 117 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 TRBV7-6A0A0J9YX20 115 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 MDFIC2A0A1B0GVS7 189 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 C7orf71A4D174 169 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 C3orf84H3BNL1 204 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 H3BT86 120 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 J3QQQ9 107 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 M0R2Z0 102 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 PSCAO43653 123 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 IGKV1-16P04430 117 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 ZNF728P0DKX0 622 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 FABP2P12104 132 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 RPL35P42766 123 aaKnown RBP2.69□□□□□ -1.98
PTCD3-214ENST00000483925 RPL28P46779 137 aaKnown RBP2.69□□□□□ -1.98
PTCD3-214ENST00000483925 EIF2B2P49770 351 aaKnown RBP2.69□□□□□ -1.98
PTCD3-214ENST00000483925 AQP4P55087 323 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 DNAJB13P59910 316 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 RHOGP84095 191 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 LYZL1Q6UWQ5 148 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 OR51A4Q8NGJ6 313 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 PFN4Q8NHR9 129 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 TMEM106AQ96A25 262 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 AP1S3Q96PC3 154 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 OR8B2Q96RD0 313 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 C2orf88Q9BSF0 95 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 ANAPC11Q9NYG5 84 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 MYH2Q9UKX2 1941 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 A2MP01023 1474 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 MED1Q15648 1581 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-214ENST00000483925 ARHGAP21Q5T5U3 1957 aa2.69□□□□□ -1.98
PTCD3-214ENST00000483925 IGKV2D-24A0A075B6R9 120 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 A0A0D9SG52 128 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 A0A1B0GV90 55 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 ODAMA1E959 279 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 RPL36A-HNRNPH2H7BZ11 118 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 SYNGR2O43760 224 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 HIST1H2BKO60814 126 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 NAPSAO96009 420 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 IFNA4P05014 189 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 HIST1H2BJP06899 126 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 DNAH10OSP0CZ25 163 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 ZNF22P17026 224 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-214ENST00000483925 TMBIM6P55061 237 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 HBBP68871 147 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 HIST1H1AQ02539 215 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-214ENST00000483925 KISS1Q15726 138 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 KHDC3LQ587J8 217 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 EIF5AL1Q6IS14 154 aaKnown RBP2.68□□□□□ -1.98
PTCD3-214ENST00000483925 Q6P435 159 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 DPPA3Q6W0C5 159 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 HIGD2AQ9BW72 106 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 SMIM3Q9BZL3 60 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 KLK12Q9UKR0 248 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 YEATS2Q9ULM3 1422 aa2.68□□□□□ -1.98
PTCD3-214ENST00000483925 TRAV7A0A075B6U4 112 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 LOC107984640A0A0U1RRK4 108 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 A0A1B0GW64 132 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 CCDC160A6NGH7 325 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 LINC00587B1AMM8 73 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 J3QR89 54 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 GNRH2O43555 120 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 NDUFB3O43676 98 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 HTR1AP08908 422 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 CXCL1P09341 107 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 HLA-EP13747 358 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 ARPP19P56211 112 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 KRTAP12-2P59991 146 aa2.67□□□□□ -1.98
PTCD3-214ENST00000483925 PABPC1L2AQ5JQF8 200 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms