RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 DMRT1Q9Y5R6 373 aa20.75■□□□□ 0.91
SHOX2-204ENST00000483851 NAV2Q8IVL1 2488 aa20.74■□□□□ 0.91
SHOX2-204ENST00000483851 MT-CO2P00403 227 aa20.74■□□□□ 0.91
SHOX2-204ENST00000483851 AVPP01185 164 aa20.74■□□□□ 0.91
SHOX2-204ENST00000483851 IGHV4-31P0DP07 118 aa20.74■□□□□ 0.91
SHOX2-204ENST00000483851 RND2P52198 227 aa20.74■□□□□ 0.91
SHOX2-204ENST00000483851 LINC00518Q8N0U6 118 aa20.74■□□□□ 0.91
SHOX2-204ENST00000483851 TMEM68Q96MH6 324 aa20.74■□□□□ 0.91
SHOX2-204ENST00000483851 TRGV9Q99603 122 aa20.74■□□□□ 0.91
SHOX2-204ENST00000483851 PRELID1Q9Y255 219 aa20.74■□□□□ 0.91
SHOX2-204ENST00000483851 CELSR2Q9HCU4 2923 aa20.74■□□□□ 0.91
SHOX2-204ENST00000483851 I3L2K1 104 aa20.73■□□□□ 0.91
SHOX2-204ENST00000483851 KRTAP1-3Q8IUG1 177 aa20.73■□□□□ 0.91
SHOX2-204ENST00000483851 NDPQ00604 133 aa20.73■□□□□ 0.91
SHOX2-204ENST00000483851 ASPHD1Q5U4P2 390 aa20.73■□□□□ 0.91
SHOX2-204ENST00000483851 C5orf56Q8N8D9 126 aa20.73■□□□□ 0.91
SHOX2-204ENST00000483851 Q96MF0 132 aa20.73■□□□□ 0.91
SHOX2-204ENST00000483851 RNF2Q99496 336 aa20.73■□□□□ 0.91
SHOX2-204ENST00000483851 SSX3Q99909 188 aa20.73■□□□□ 0.91
SHOX2-204ENST00000483851 FAM103A1Q9BTL3 118 aaKnown RBP20.73■□□□□ 0.91
SHOX2-204ENST00000483851 IGKV1D-37A0A075B6S9 117 aa20.72■□□□□ 0.91
SHOX2-204ENST00000483851 C5orf52A6NGY3 159 aa20.72■□□□□ 0.91
SHOX2-204ENST00000483851 STAG3L2P0CL84 134 aa20.72■□□□□ 0.91
SHOX2-204ENST00000483851 STAG3L3P0CL85 134 aa20.72■□□□□ 0.91
SHOX2-204ENST00000483851 SGMS2Q8NHU3 365 aa20.72■□□□□ 0.91
SHOX2-204ENST00000483851 Q8WTZ3 238 aa20.72■□□□□ 0.91
SHOX2-204ENST00000483851 CENPEQ02224 2701 aa20.72■□□□□ 0.91
SHOX2-204ENST00000483851 POLQO75417 2590 aa20.71■□□□□ 0.91
SHOX2-204ENST00000483851 OR4X1Q8NH49 305 aa20.71■□□□□ 0.91
SHOX2-204ENST00000483851 NANPQ8TBE9 248 aa20.71■□□□□ 0.91
SHOX2-204ENST00000483851 MRPL36Q9P0J6 103 aaKnown RBP20.71■□□□□ 0.91
SHOX2-204ENST00000483851 EGR2P11161 476 aaPredicted RBP20.71■□□□□ 0.91
SHOX2-204ENST00000483851 ZNF343Q6P1L6 599 aa20.71■□□□□ 0.91
SHOX2-204ENST00000483851 C19orf35Q6ZS72 473 aa20.71■□□□□ 0.91
SHOX2-204ENST00000483851 NAT8Q9UHE5 227 aa20.71■□□□□ 0.91
SHOX2-204ENST00000483851 PITPNC1Q9UKF7 332 aa20.71■□□□□ 0.91
SHOX2-204ENST00000483851 CXorf1O96002 111 aa20.7■□□□□ 0.9
SHOX2-204ENST00000483851 KLK9Q2XQG4 91 aa20.7■□□□□ 0.9
SHOX2-204ENST00000483851 TNFRSF19Q9NS68 423 aa20.7■□□□□ 0.9
SHOX2-204ENST00000483851 THYN1Q9P016 225 aa20.7■□□□□ 0.9
SHOX2-204ENST00000483851 KLK9Q9UKQ9 250 aa20.7■□□□□ 0.9
SHOX2-204ENST00000483851 ABCA12Q86UK0 2595 aa20.7■□□□□ 0.9
SHOX2-204ENST00000483851 CR1P17927 2039 aa20.7■□□□□ 0.9
SHOX2-204ENST00000483851 IGLV11-55A0A075B6I3 123 aa20.69■□□□□ 0.9
SHOX2-204ENST00000483851 PAGE4O60829 102 aa20.69■□□□□ 0.9
SHOX2-204ENST00000483851 CXCL1P09341 107 aa20.69■□□□□ 0.9
SHOX2-204ENST00000483851 PFDN5Q99471 154 aa20.69■□□□□ 0.9
SHOX2-204ENST00000483851 SMIM7Q9BQ49 75 aa20.69■□□□□ 0.9
SHOX2-204ENST00000483851 FUT9Q9Y231 359 aa20.69■□□□□ 0.9
SHOX2-204ENST00000483851 K7EIM0 57 aa20.69■□□□□ 0.9
SHOX2-204ENST00000483851 M0QZK8 103 aa20.69■□□□□ 0.9
SHOX2-204ENST00000483851 OR5G3P0C626 314 aa20.69■□□□□ 0.9
SHOX2-204ENST00000483851 C16orf82Q7Z2V1 217 aa20.69■□□□□ 0.9
SHOX2-204ENST00000483851 OR1L4Q8NGR5 311 aa20.69■□□□□ 0.9
SHOX2-204ENST00000483851 MRPL32Q9BYC8 188 aaKnown RBP20.69■□□□□ 0.9
SHOX2-204ENST00000483851 HELZ2Q9BYK8 2649 aaKnown RBP20.68■□□□□ 0.9
SHOX2-204ENST00000483851 HIST1H1BP16401 226 aaKnown RBP20.68■□□□□ 0.9
SHOX2-204ENST00000483851 SNRPEP62304 92 aaKnown RBP20.68■□□□□ 0.9
SHOX2-204ENST00000483851 FANCD2OSQ96PS1 177 aa20.68■□□□□ 0.9
SHOX2-204ENST00000483851 HSPB9Q9BQS6 159 aa20.68■□□□□ 0.9
SHOX2-204ENST00000483851 SEPSECSQ9HD40 501 aaKnown RBP20.68■□□□□ 0.9
SHOX2-204ENST00000483851 A6NDX4 124 aa20.67■□□□□ 0.9
SHOX2-204ENST00000483851 IGHV3-48P01763 117 aa20.67■□□□□ 0.9
SHOX2-204ENST00000483851 TMEM241Q24JQ0 296 aa20.67■□□□□ 0.9
SHOX2-204ENST00000483851 FAM78BQ5VT40 261 aa20.67■□□□□ 0.9
SHOX2-204ENST00000483851 OR4F5Q8NH21 305 aa20.67■□□□□ 0.9
SHOX2-204ENST00000483851 FAM110DQ8TAY7 271 aaPredicted RBP20.67■□□□□ 0.9
SHOX2-204ENST00000483851 ZNF48Q96MX3 618 aaPredicted RBP20.67■□□□□ 0.9
SHOX2-204ENST00000483851 OR4F4Q96R69 305 aa20.67■□□□□ 0.9
SHOX2-204ENST00000483851 CTDSP1Q9GZU7 261 aa20.67■□□□□ 0.9
SHOX2-204ENST00000483851 PARLQ9H300 379 aa20.67■□□□□ 0.9
SHOX2-204ENST00000483851 PSMB11A5LHX3 300 aa20.67■□□□□ 0.9
SHOX2-204ENST00000483851 CYB5R2Q6BCY4 276 aa20.67■□□□□ 0.9
SHOX2-204ENST00000483851 MAPK1IP1LQ8NDC0 245 aa20.67■□□□□ 0.9
SHOX2-204ENST00000483851 DNAJC4Q9NNZ3 241 aa20.67■□□□□ 0.9
SHOX2-204ENST00000483851 PRRC2AP48634 2157 aaKnown RBP20.66■□□□□ 0.9
SHOX2-204ENST00000483851 APCP25054 2843 aa20.66■□□□□ 0.9
SHOX2-204ENST00000483851 UBE2CO00762 179 aa20.66■□□□□ 0.9
SHOX2-204ENST00000483851 FSHBP01225 129 aa20.66■□□□□ 0.9
SHOX2-204ENST00000483851 NPPCP23582 126 aa20.66■□□□□ 0.9
SHOX2-204ENST00000483851 GATA2P23769 480 aaPredicted RBP20.66■□□□□ 0.9
SHOX2-204ENST00000483851 HIST2H2BCQ6DN03 193 aa20.66■□□□□ 0.9
SHOX2-204ENST00000483851 ELOA3CA0A087WX78 387 aaPredicted RBP20.65■□□□□ 0.9
SHOX2-204ENST00000483851 CLDN34H7C241 214 aa20.65■□□□□ 0.9
SHOX2-204ENST00000483851 CLN5O75503 358 aa20.65■□□□□ 0.9
SHOX2-204ENST00000483851 FABP1P07148 127 aa20.65■□□□□ 0.9
SHOX2-204ENST00000483851 RPL35P42766 123 aaKnown RBP20.65■□□□□ 0.9
SHOX2-204ENST00000483851 CRIP2P52943 208 aaPredicted RBP20.65■□□□□ 0.9
SHOX2-204ENST00000483851 TAS2R45P59539 299 aa20.65■□□□□ 0.9
SHOX2-204ENST00000483851 ZNF90Q03938 601 aa20.65■□□□□ 0.9
SHOX2-204ENST00000483851 SPNS3Q6ZMD2 512 aa20.65■□□□□ 0.9
SHOX2-204ENST00000483851 C9orf139Q6ZV77 190 aa20.65■□□□□ 0.9
SHOX2-204ENST00000483851 TXNDC17Q9BRA2 123 aa20.65■□□□□ 0.9
SHOX2-204ENST00000483851 TECRQ9NZ01 308 aaKnown RBP20.65■□□□□ 0.9
SHOX2-204ENST00000483851 TGIF2-C20orf24A0A0A6YYL0 155 aa20.64■□□□□ 0.9
SHOX2-204ENST00000483851 H3BUX3 64 aa20.64■□□□□ 0.9
SHOX2-204ENST00000483851 IGLC1P0CG04 106 aa20.64■□□□□ 0.9
SHOX2-204ENST00000483851 ARL14EPLP0DKL9 152 aa20.64■□□□□ 0.9
SHOX2-204ENST00000483851 RPL23P62829 140 aaKnown RBP20.64■□□□□ 0.9
SHOX2-204ENST00000483851 RPUSD4Q96CM3 377 aaKnown RBP20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms