RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 OPRK1P41145 380 aa10.05□□□□□ -0.8
VARS-226ENST00000483275 SP6Q3SY56 376 aa10.05□□□□□ -0.8
VARS-226ENST00000483275 TERB2Q8NHR7 220 aa10.05□□□□□ -0.8
VARS-226ENST00000483275 FAM212BQ9NTI7 297 aaPredicted RBP10.05□□□□□ -0.8
VARS-226ENST00000483275 COPZ2Q9P299 210 aa10.05□□□□□ -0.8
VARS-226ENST00000483275 C14orf166Q9Y224 244 aaKnown RBP10.05□□□□□ -0.8
VARS-226ENST00000483275 TRAV2A0A0B4J234 112 aa10.04□□□□□ -0.8
VARS-226ENST00000483275 C11orf94C9JXX5 98 aa10.04□□□□□ -0.8
VARS-226ENST00000483275 IGKV1-17P01599 117 aa10.04□□□□□ -0.8
VARS-226ENST00000483275 CD5P06127 495 aa10.04□□□□□ -0.8
VARS-226ENST00000483275 MIFP14174 115 aa10.04□□□□□ -0.8
VARS-226ENST00000483275 FAUP35544 74 aaKnown RBP10.04□□□□□ -0.8
VARS-226ENST00000483275 PIGPP57054 158 aa10.04□□□□□ -0.8
VARS-226ENST00000483275 PSMG4Q5JS54 123 aa10.04□□□□□ -0.8
VARS-226ENST00000483275 SPANXN2Q5MJ10 180 aa10.04□□□□□ -0.8
VARS-226ENST00000483275 LHFPL1Q86WI0 220 aa10.04□□□□□ -0.8
VARS-226ENST00000483275 OR4D10Q8NGI6 311 aa10.04□□□□□ -0.8
VARS-226ENST00000483275 DCANP1Q8TF63 244 aa10.04□□□□□ -0.8
VARS-226ENST00000483275 METTL26Q96S19 204 aa10.04□□□□□ -0.8
VARS-226ENST00000483275 PRRT1Q99946 306 aa10.04□□□□□ -0.8
VARS-226ENST00000483275 HRH4Q9H3N8 390 aa10.04□□□□□ -0.8
VARS-226ENST00000483275 TMEM231Q9H6L2 316 aa10.04□□□□□ -0.8
VARS-226ENST00000483275 SCP2D1Q9UJQ7 156 aa10.04□□□□□ -0.8
VARS-226ENST00000483275 TBC1D24Q9ULP9 559 aa10.04□□□□□ -0.8
VARS-226ENST00000483275 TRAV10A0A0B4J240 114 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 ANKRD20A5PA0PJZ0 165 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 ZNF705EA8MWA4 302 aaPredicted RBP10.03□□□□□ -0.8
VARS-226ENST00000483275 M0R2N4 97 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 CLN5O75503 358 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 ATG12O94817 140 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 CRYBB3P26998 211 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 TCTAP57738 103 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 AP3S2P59780 193 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 RND3P61587 244 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 DHRS2Q13268 280 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 TRIM16LQ309B1 348 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 FAAP20Q6NZ36 180 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 GSG1LQ6UXU4 331 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 OR4C16Q8NGL9 310 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 MARCH1Q8TCQ1 289 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 TMEM230Q96A57 120 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 MUC4Q99102 2169 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 MCUBQ9NWR8 336 aa10.03□□□□□ -0.8
VARS-226ENST00000483275 A0A1B0GVY2 172 aa10.02□□□□□ -0.81
VARS-226ENST00000483275 SPP1P10451 314 aa10.02□□□□□ -0.81
VARS-226ENST00000483275 INPP1P49441 399 aa10.02□□□□□ -0.81
VARS-226ENST00000483275 DEFB1P60022 68 aa10.02□□□□□ -0.81
VARS-226ENST00000483275 C12orf74Q32Q52 190 aa10.02□□□□□ -0.81
VARS-226ENST00000483275 PVRIGQ6DKI7 326 aa10.02□□□□□ -0.81
VARS-226ENST00000483275 TOMM5Q8N4H5 51 aa10.02□□□□□ -0.81
VARS-226ENST00000483275 CSNK1G2-AS1Q8NCQ2 148 aa10.02□□□□□ -0.81
VARS-226ENST00000483275 OR13C8Q8NGS7 320 aa10.02□□□□□ -0.81
VARS-226ENST00000483275 GRAMD2BQ96HH9 432 aa10.02□□□□□ -0.81
VARS-226ENST00000483275 SCGB3A2Q96PL1 93 aa10.02□□□□□ -0.81
VARS-226ENST00000483275 SOSTQ9BQB4 213 aa10.02□□□□□ -0.81
VARS-226ENST00000483275 PDCD10Q9BUL8 212 aa10.02□□□□□ -0.81
VARS-226ENST00000483275 XCL2Q9UBD3 114 aa10.02□□□□□ -0.81
VARS-226ENST00000483275 C3orf85A0A1B0GTC6 90 aa10.01□□□□□ -0.81
VARS-226ENST00000483275 B3GALNT1O75752 331 aa10.01□□□□□ -0.81
VARS-226ENST00000483275 NXPH3O95157 252 aa10.01□□□□□ -0.81
VARS-226ENST00000483275 SURF2Q15527 256 aaPredicted RBP10.01□□□□□ -0.81
VARS-226ENST00000483275 MORN3Q6PF18 240 aaPredicted RBP10.01□□□□□ -0.81
VARS-226ENST00000483275 Q6ZRM9 215 aa10.01□□□□□ -0.81
VARS-226ENST00000483275 OR4X1Q8NH49 305 aa10.01□□□□□ -0.81
VARS-226ENST00000483275 RNASE11Q8TAA1 199 aaKnown RBP10.01□□□□□ -0.81
VARS-226ENST00000483275 RAB40CQ96S21 281 aa10.01□□□□□ -0.81
VARS-226ENST00000483275 ENY2Q9NPA8 101 aa10.01□□□□□ -0.81
VARS-226ENST00000483275 DEFB131BA0A096LNP1 70 aa10□□□□□ -0.81
VARS-226ENST00000483275 TEX13DA0A0J9YY54 714 aaPredicted RBP10□□□□□ -0.81
VARS-226ENST00000483275 A0A1W2PS18 150 aa10□□□□□ -0.81
VARS-226ENST00000483275 HELTA6NFD8 242 aa10□□□□□ -0.81
VARS-226ENST00000483275 RTL8CO15255 209 aa10□□□□□ -0.81
VARS-226ENST00000483275 AMBPP02760 352 aa10□□□□□ -0.81
VARS-226ENST00000483275 RND2P52198 227 aa10□□□□□ -0.81
VARS-226ENST00000483275 CCDC190Q86UF4 302 aa10□□□□□ -0.81
VARS-226ENST00000483275 OR51S1Q8NGJ8 323 aa10□□□□□ -0.81
VARS-226ENST00000483275 GLMPQ8WWB7 406 aa10□□□□□ -0.81
VARS-226ENST00000483275 NARS2Q96I59 477 aaKnown RBP10□□□□□ -0.81
VARS-226ENST00000483275 RNF126Q9BV68 326 aa10□□□□□ -0.81
VARS-226ENST00000483275 V9GYH0 126 aa10□□□□□ -0.81
VARS-226ENST00000483275 INS-IGF2F8WCM5 200 aa9.99□□□□□ -0.81
VARS-226ENST00000483275 CORTO00230 105 aa9.99□□□□□ -0.81
VARS-226ENST00000483275 IGLC1P0CG04 106 aa9.99□□□□□ -0.81
VARS-226ENST00000483275 SUB1P53999 127 aaKnown RBP eCLIP9.99□□□□□ -0.81
VARS-226ENST00000483275 EMP1P54849 157 aa9.99□□□□□ -0.81
VARS-226ENST00000483275 FXYD7P58549 80 aa9.99□□□□□ -0.81
VARS-226ENST00000483275 USF2Q15853 346 aaPredicted RBP9.99□□□□□ -0.81
VARS-226ENST00000483275 TMEM41BQ5BJD5 291 aa9.99□□□□□ -0.81
VARS-226ENST00000483275 CENPSQ8N2Z9 138 aa9.99□□□□□ -0.81
VARS-226ENST00000483275 LHFPL5Q8TAF8 219 aa9.99□□□□□ -0.81
VARS-226ENST00000483275 DYNC1H1Q14204 4646 aaKnown RBP9.99□□□□□ -0.81
VARS-226ENST00000483275 ABCA13Q86UQ4 5058 aa9.98□□□□□ -0.81
VARS-226ENST00000483275 PRSS29PA6NIE9 313 aa9.98□□□□□ -0.81
VARS-226ENST00000483275 FAM90A26D6RGX4 464 aa9.98□□□□□ -0.81
VARS-226ENST00000483275 IGKV3-20P01619 116 aa9.98□□□□□ -0.81
VARS-226ENST00000483275 HNRNPCP07910 306 aaKnown RBP eCLIP9.98□□□□□ -0.81
VARS-226ENST00000483275 OR10J1P30954 320 aa9.98□□□□□ -0.81
VARS-226ENST00000483275 DHODHQ02127 395 aa9.98□□□□□ -0.81
VARS-226ENST00000483275 BSXQ3C1V8 233 aa9.98□□□□□ -0.81
VARS-226ENST00000483275 TRIQKQ629K1 86 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms