RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 CD7P09564 240 aa13.82□□□□□ -0.2
SMIM4-204ENST00000482728 OR10J1P30954 320 aa13.82□□□□□ -0.2
SMIM4-204ENST00000482728 TIGITQ495A1 244 aa13.82□□□□□ -0.2
SMIM4-204ENST00000482728 OR1S2Q8NGQ3 325 aa13.82□□□□□ -0.2
SMIM4-204ENST00000482728 NPIPB3Q92617 1050 aa13.82□□□□□ -0.2
SMIM4-204ENST00000482728 TBC1D24Q9ULP9 559 aa13.82□□□□□ -0.2
SMIM4-204ENST00000482728 MPTX1A8MV57 137 aa13.81□□□□□ -0.2
SMIM4-204ENST00000482728 A8MZ25 164 aa13.81□□□□□ -0.2
SMIM4-204ENST00000482728 IGKV1-17P01599 117 aa13.81□□□□□ -0.2
SMIM4-204ENST00000482728 GPX4P36969 197 aaPredicted RBP13.81□□□□□ -0.2
SMIM4-204ENST00000482728 NKX2-1P43699 371 aaPredicted RBP13.81□□□□□ -0.2
SMIM4-204ENST00000482728 ID3Q02535 119 aa13.81□□□□□ -0.2
SMIM4-204ENST00000482728 SBSPONQ8IVN8 264 aa13.81□□□□□ -0.2
SMIM4-204ENST00000482728 ENKURQ8TC29 256 aa13.81□□□□□ -0.2
SMIM4-204ENST00000482728 Q8WTZ3 238 aa13.81□□□□□ -0.2
SMIM4-204ENST00000482728 ZNF414Q96IQ9 312 aa13.81□□□□□ -0.2
SMIM4-204ENST00000482728 C19orf73Q9NVV2 129 aa13.81□□□□□ -0.2
SMIM4-204ENST00000482728 GSKIPQ9P0R6 139 aa13.81□□□□□ -0.2
SMIM4-204ENST00000482728 IGHV3OR16-13A0A075B7E8 117 aa13.8□□□□□ -0.2
SMIM4-204ENST00000482728 IGHV3-74A0A0B4J1X5 117 aa13.8□□□□□ -0.2
SMIM4-204ENST00000482728 OR11H12B2RN74 326 aa13.8□□□□□ -0.2
SMIM4-204ENST00000482728 CHEK1O14757 476 aa13.8□□□□□ -0.2
SMIM4-204ENST00000482728 TSPAN4O14817 238 aa13.8□□□□□ -0.2
SMIM4-204ENST00000482728 IGLC1P0CG04 106 aa13.8□□□□□ -0.2
SMIM4-204ENST00000482728 NPPCP23582 126 aa13.8□□□□□ -0.2
SMIM4-204ENST00000482728 IAH1Q2TAA2 248 aaPredicted RBP13.8□□□□□ -0.2
SMIM4-204ENST00000482728 ZNF431Q8TF32 576 aaPredicted RBP13.8□□□□□ -0.2
SMIM4-204ENST00000482728 SLC35E1Q96K37 410 aa13.8□□□□□ -0.2
SMIM4-204ENST00000482728 METTL26Q96S19 204 aa13.8□□□□□ -0.2
SMIM4-204ENST00000482728 SPAG8Q99932 426 aaPredicted RBP13.8□□□□□ -0.2
SMIM4-204ENST00000482728 COL7A1Q02388 2944 aa13.79□□□□□ -0.2
SMIM4-204ENST00000482728 YPEL3P61236 119 aaPredicted RBP13.79□□□□□ -0.2
SMIM4-204ENST00000482728 SPANXN5Q5MJ07 72 aa13.79□□□□□ -0.2
SMIM4-204ENST00000482728 DEFB125Q8N687 156 aa13.79□□□□□ -0.2
SMIM4-204ENST00000482728 NARS2Q96I59 477 aaKnown RBP13.79□□□□□ -0.2
SMIM4-204ENST00000482728 RNF2Q99496 336 aa13.79□□□□□ -0.2
SMIM4-204ENST00000482728 SEC22CQ9BRL7 303 aa13.79□□□□□ -0.2
SMIM4-204ENST00000482728 TMEM231Q9H6L2 316 aa13.79□□□□□ -0.2
SMIM4-204ENST00000482728 ZFAND3Q9H8U3 227 aa13.79□□□□□ -0.2
SMIM4-204ENST00000482728 STRAPQ9Y3F4 350 aaKnown RBP13.79□□□□□ -0.2
SMIM4-204ENST00000482728 A0A1W2PS18 150 aa13.78□□□□□ -0.2
SMIM4-204ENST00000482728 OR4C46A6NHA9 309 aa13.78□□□□□ -0.2
SMIM4-204ENST00000482728 CD5P06127 495 aa13.78□□□□□ -0.2
SMIM4-204ENST00000482728 RD3LP0DJH9 198 aa13.78□□□□□ -0.2
SMIM4-204ENST00000482728 POLR2GP62487 172 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMIM4-204ENST00000482728 C12orf45Q8N5I9 185 aaPredicted RBP13.78□□□□□ -0.2
SMIM4-204ENST00000482728 OR4D5Q8NGN0 318 aa13.78□□□□□ -0.2
SMIM4-204ENST00000482728 U3KQK5 164 aa13.78□□□□□ -0.2
SMIM4-204ENST00000482728 ZFP92A6NM28 416 aa13.77□□□□□ -0.21
SMIM4-204ENST00000482728 FAM25EA8MYX2 175 aa13.77□□□□□ -0.21
SMIM4-204ENST00000482728 SCGB1D2O95969 90 aa13.77□□□□□ -0.21
SMIM4-204ENST00000482728 DEFA1P59665 94 aa13.77□□□□□ -0.21
SMIM4-204ENST00000482728 DEFA3P59666 94 aa13.77□□□□□ -0.21
SMIM4-204ENST00000482728 GAMTQ14353 236 aa13.77□□□□□ -0.21
SMIM4-204ENST00000482728 ZBTB8BQ8NAP8 495 aaPredicted RBP13.77□□□□□ -0.21
SMIM4-204ENST00000482728 ZMAT4Q9H898 229 aa13.77□□□□□ -0.21
SMIM4-204ENST00000482728 PSENENQ9NZ42 101 aa13.77□□□□□ -0.21
SMIM4-204ENST00000482728 IGKV3-7A0A075B6H7 116 aa13.76□□□□□ -0.21
SMIM4-204ENST00000482728 IGHV3-66A0A0C4DH42 116 aa13.76□□□□□ -0.21
SMIM4-204ENST00000482728 C5orf51A6NDU8 294 aa13.76□□□□□ -0.21
SMIM4-204ENST00000482728 H3BP45 60 aa13.76□□□□□ -0.21
SMIM4-204ENST00000482728 SSSCA1O60232 199 aa13.76□□□□□ -0.21
SMIM4-204ENST00000482728 APOHP02749 345 aaPredicted RBP13.76□□□□□ -0.21
SMIM4-204ENST00000482728 RPL11P62913 178 aaKnown RBP13.76□□□□□ -0.21
SMIM4-204ENST00000482728 PAFAH1B2P68402 229 aa13.76□□□□□ -0.21
SMIM4-204ENST00000482728 IFITM3Q01628 133 aa13.76□□□□□ -0.21
SMIM4-204ENST00000482728 TCF24Q7RTU0 167 aa13.76□□□□□ -0.21
SMIM4-204ENST00000482728 ST8SIA2Q92186 375 aa13.76□□□□□ -0.21
SMIM4-204ENST00000482728 GRAMD2BQ96HH9 432 aa13.76□□□□□ -0.21
SMIM4-204ENST00000482728 VSIRQ9H7M9 311 aa13.76□□□□□ -0.21
SMIM4-204ENST00000482728 SRD5A3Q9H8P0 318 aa13.76□□□□□ -0.21
SMIM4-204ENST00000482728 TOMM40O96008 361 aa13.75□□□□□ -0.21
SMIM4-204ENST00000482728 IL5P05113 134 aa13.75□□□□□ -0.21
SMIM4-204ENST00000482728 FABP1P07148 127 aa13.75□□□□□ -0.21
SMIM4-204ENST00000482728 SMIM8Q96KF7 97 aa13.75□□□□□ -0.21
SMIM4-204ENST00000482728 RAB40CQ96S21 281 aa13.75□□□□□ -0.21
SMIM4-204ENST00000482728 WFDC10AQ9H1F0 79 aa13.75□□□□□ -0.21
SMIM4-204ENST00000482728 GPN1Q9HCN4 374 aaPredicted RBP13.75□□□□□ -0.21
SMIM4-204ENST00000482728 CCSO14618 274 aa13.74□□□□□ -0.21
SMIM4-204ENST00000482728 DFFBO76075 338 aa13.74□□□□□ -0.21
SMIM4-204ENST00000482728 IL4P05112 153 aa13.74□□□□□ -0.21
SMIM4-204ENST00000482728 PSG1P11464 419 aa13.74□□□□□ -0.21
SMIM4-204ENST00000482728 CRYBB3P26998 211 aa13.74□□□□□ -0.21
SMIM4-204ENST00000482728 TFPI2P48307 235 aa13.74□□□□□ -0.21
SMIM4-204ENST00000482728 HAGHQ16775 308 aa13.74□□□□□ -0.21
SMIM4-204ENST00000482728 NRARPQ7Z6K4 114 aa13.74□□□□□ -0.21
SMIM4-204ENST00000482728 GBGT1Q8N5D6 347 aa13.74□□□□□ -0.21
SMIM4-204ENST00000482728 DNAH9Q9NYC9 4486 aa13.73□□□□□ -0.21
SMIM4-204ENST00000482728 DNASE2O00115 360 aaPredicted RBP13.73□□□□□ -0.21
SMIM4-204ENST00000482728 CMC4P56277 68 aaPredicted RBP13.73□□□□□ -0.21
SMIM4-204ENST00000482728 FAM90A2PQ658T7 463 aa13.73□□□□□ -0.21
SMIM4-204ENST00000482728 LILRB2Q8N423 598 aa13.73□□□□□ -0.21
SMIM4-204ENST00000482728 OR51G1Q8NGK1 321 aa13.73□□□□□ -0.21
SMIM4-204ENST00000482728 STAB2Q8WWQ8 2551 aa13.72□□□□□ -0.21
SMIM4-204ENST00000482728 MBPP02686 304 aaPredicted RBP13.72□□□□□ -0.21
SMIM4-204ENST00000482728 HNRNPCP07910 306 aaKnown RBP eCLIP13.72□□□□□ -0.21
SMIM4-204ENST00000482728 OR8G2PQ6IF36 304 aa13.72□□□□□ -0.21
SMIM4-204ENST00000482728 GSG1LQ6UXU4 331 aa13.72□□□□□ -0.21
SMIM4-204ENST00000482728 WFDC3Q8IUB2 231 aa13.72□□□□□ -0.21
SMIM4-204ENST00000482728 C2orf50Q96LR7 162 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms