RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 FBXL7Q9UJT9 491 aa11.99□□□□□ -0.49
ATG4B-220ENST00000482507 TRBV9A0A0B4J1U6 114 aa11.99□□□□□ -0.49
ATG4B-220ENST00000482507 APOA2P02652 100 aa11.99□□□□□ -0.49
ATG4B-220ENST00000482507 RANP62826 216 aaKnown RBP11.99□□□□□ -0.49
ATG4B-220ENST00000482507 UBE2L3P68036 154 aaKnown RBP11.99□□□□□ -0.49
ATG4B-220ENST00000482507 IBA57Q5T440 356 aaKnown RBP11.99□□□□□ -0.49
ATG4B-220ENST00000482507 LYPD2Q6UXB3 125 aa11.99□□□□□ -0.49
ATG4B-220ENST00000482507 RITA1Q96K30 269 aa11.99□□□□□ -0.49
ATG4B-220ENST00000482507 ZNF714Q96N38 554 aa11.99□□□□□ -0.49
ATG4B-220ENST00000482507 GAL3ST2Q9H3Q3 398 aa11.99□□□□□ -0.49
ATG4B-220ENST00000482507 DNAJC4Q9NNZ3 241 aa11.99□□□□□ -0.49
ATG4B-220ENST00000482507 TPSG1Q9NRR2 321 aa11.99□□□□□ -0.49
ATG4B-220ENST00000482507 SMIM27A0A1W2PRY6 76 aa11.98□□□□□ -0.49
ATG4B-220ENST00000482507 NKX6-3A6NJ46 265 aa11.98□□□□□ -0.49
ATG4B-220ENST00000482507 C17orf100A8MU93 164 aa11.98□□□□□ -0.49
ATG4B-220ENST00000482507 FSTL3O95633 263 aa11.98□□□□□ -0.49
ATG4B-220ENST00000482507 IGLV2-23P01705 113 aa11.98□□□□□ -0.49
ATG4B-220ENST00000482507 RAB4AP20338 218 aa11.98□□□□□ -0.49
ATG4B-220ENST00000482507 CACNG8Q8WXS5 425 aa11.98□□□□□ -0.49
ATG4B-220ENST00000482507 NPIPB3Q92617 1050 aa11.98□□□□□ -0.49
ATG4B-220ENST00000482507 FLYWCH2Q96CP2 140 aaKnown RBP11.98□□□□□ -0.49
ATG4B-220ENST00000482507 NEU1Q99519 415 aa11.98□□□□□ -0.49
ATG4B-220ENST00000482507 SSBP3Q9BWW4 388 aaPredicted RBP11.98□□□□□ -0.49
ATG4B-220ENST00000482507 BMPR1BO00238 502 aa11.98□□□□□ -0.49
ATG4B-220ENST00000482507 MEF2CQ06413 473 aaPredicted RBP11.98□□□□□ -0.49
ATG4B-220ENST00000482507 WFDC8Q8IUA0 241 aa11.98□□□□□ -0.49
ATG4B-220ENST00000482507 Q8N976 141 aa11.98□□□□□ -0.49
ATG4B-220ENST00000482507 VN1R17PQ8TDU5 208 aa11.98□□□□□ -0.49
ATG4B-220ENST00000482507 FAM103A1Q9BTL3 118 aaKnown RBP11.98□□□□□ -0.49
ATG4B-220ENST00000482507 MRPL32Q9BYC8 188 aaKnown RBP11.98□□□□□ -0.49
ATG4B-220ENST00000482507 SAMD10Q9BYL1 202 aa11.98□□□□□ -0.49
ATG4B-220ENST00000482507 ZNF430Q9H8G1 570 aaPredicted RBP11.98□□□□□ -0.49
ATG4B-220ENST00000482507 ZNF355PQ9NSJ1 428 aa11.98□□□□□ -0.49
ATG4B-220ENST00000482507 TRAV34A0A0B4J273 112 aa11.97□□□□□ -0.49
ATG4B-220ENST00000482507 GPX1P07203 203 aa11.97□□□□□ -0.49
ATG4B-220ENST00000482507 THBDP07204 575 aa11.97□□□□□ -0.49
ATG4B-220ENST00000482507 ERHP84090 104 aaKnown RBP11.97□□□□□ -0.49
ATG4B-220ENST00000482507 MRGPRG-AS1Q2M3A8 158 aa11.97□□□□□ -0.49
ATG4B-220ENST00000482507 LHFPL4Q7Z7J7 247 aa11.97□□□□□ -0.49
ATG4B-220ENST00000482507 TMEM167AQ8TBQ9 72 aa11.97□□□□□ -0.49
ATG4B-220ENST00000482507 SERTAD4Q9NUC0 356 aa11.97□□□□□ -0.49
ATG4B-220ENST00000482507 INS-IGF2F8WCM5 200 aa11.97□□□□□ -0.49
ATG4B-220ENST00000482507 TCAPO15273 167 aa11.97□□□□□ -0.49
ATG4B-220ENST00000482507 REG1AP05451 166 aa11.97□□□□□ -0.49
ATG4B-220ENST00000482507 ZNF843Q8N446 348 aa11.97□□□□□ -0.49
ATG4B-220ENST00000482507 LINC01560Q8TB33 94 aa11.97□□□□□ -0.49
ATG4B-220ENST00000482507 H1FXQ92522 213 aaKnown RBP11.97□□□□□ -0.49
ATG4B-220ENST00000482507 CDC42EP3Q9UKI2 254 aa11.97□□□□□ -0.49
ATG4B-220ENST00000482507 PAM16Q9Y3D7 125 aa11.97□□□□□ -0.49
ATG4B-220ENST00000482507 M0R143 59 aa11.96□□□□□ -0.49
ATG4B-220ENST00000482507 PLAUP00749 431 aa11.96□□□□□ -0.49
ATG4B-220ENST00000482507 TNFRSF1AP19438 455 aa11.96□□□□□ -0.49
ATG4B-220ENST00000482507 USF1P22415 310 aaPredicted RBP11.96□□□□□ -0.49
ATG4B-220ENST00000482507 BSPH1Q075Z2 132 aa11.96□□□□□ -0.49
ATG4B-220ENST00000482507 TMEM108Q6UXF1 575 aa11.96□□□□□ -0.49
ATG4B-220ENST00000482507 ZNF329Q86UD4 541 aa11.96□□□□□ -0.49
ATG4B-220ENST00000482507 ST6GALNAC6Q969X2 333 aa11.96□□□□□ -0.49
ATG4B-220ENST00000482507 C20orf144Q9BQM9 153 aa11.96□□□□□ -0.49
ATG4B-220ENST00000482507 CTSZQ9UBR2 303 aa11.96□□□□□ -0.49
ATG4B-220ENST00000482507 A0A1W2PS18 150 aa11.96□□□□□ -0.5
ATG4B-220ENST00000482507 TMEM178BH3BS89 294 aa11.96□□□□□ -0.5
ATG4B-220ENST00000482507 TNFRSF13BO14836 293 aaPredicted RBP11.96□□□□□ -0.5
ATG4B-220ENST00000482507 PLXNB1O43157 2135 aa11.96□□□□□ -0.5
ATG4B-220ENST00000482507 COX7A2P2O60397 106 aa11.96□□□□□ -0.5
ATG4B-220ENST00000482507 AMY1AP04745 511 aa11.96□□□□□ -0.5
ATG4B-220ENST00000482507 SRIP30626 198 aa11.96□□□□□ -0.5
ATG4B-220ENST00000482507 WDR73Q6P4I2 378 aa11.96□□□□□ -0.5
ATG4B-220ENST00000482507 C19orf35Q6ZS72 473 aa11.96□□□□□ -0.5
ATG4B-220ENST00000482507 OR4C13Q8NGP0 309 aa11.96□□□□□ -0.5
ATG4B-220ENST00000482507 OR10X1Q8NGY0 326 aa11.96□□□□□ -0.5
ATG4B-220ENST00000482507 TBL2Q9Y4P3 447 aaKnown RBP11.96□□□□□ -0.5
ATG4B-220ENST00000482507 AMMECR1Q9Y4X0 333 aaPredicted RBP11.96□□□□□ -0.5
ATG4B-220ENST00000482507 MT-ND6P03923 174 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 C10orf113Q5VZT2 155 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 ZNF705AQ6ZN79 300 aaPredicted RBP11.95□□□□□ -0.5
ATG4B-220ENST00000482507 CCL17Q92583 94 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 FXYD5Q96DB9 178 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 PAXXQ9BUH6 204 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 PPIAL4EA0A075B759 164 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 TCRBV4S1A1TA0A5B7 111 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 PPIAL4DF5H284 164 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 PPIAL4FP0DN26 164 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 BRS3P32247 399 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 GNG5P63218 68 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 SLAQ13239 276 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 GDF5OSQ5U4N7 250 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 ZNF841Q6ZN19 808 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 SIGLECL1Q8N7X8 197 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 MBD6Q96DN6 1003 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 SAP30LQ9HAJ7 183 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 PPIAL4AQ9Y536 164 aa11.95□□□□□ -0.5
ATG4B-220ENST00000482507 USP9XQ93008 2570 aaPredicted RBP11.94□□□□□ -0.5
ATG4B-220ENST00000482507 A0A1W2PN81 502 aa11.94□□□□□ -0.5
ATG4B-220ENST00000482507 A0A1W2PPI3 338 aa11.94□□□□□ -0.5
ATG4B-220ENST00000482507 C22orf46C9J442 243 aa11.94□□□□□ -0.5
ATG4B-220ENST00000482507 SLC25A17O43808 307 aa11.94□□□□□ -0.5
ATG4B-220ENST00000482507 DLX1P56177 255 aa11.94□□□□□ -0.5
ATG4B-220ENST00000482507 ARL6IP6Q8N6S5 226 aa11.94□□□□□ -0.5
ATG4B-220ENST00000482507 PKDREJQ9NTG1 2253 aa11.94□□□□□ -0.5
ATG4B-220ENST00000482507 IGHV3-72A0A0B4J1Y9 119 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms