RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 NDUFA4L2Q9NRX3 87 aa11.59□□□□□ -0.55
CHD3-211ENST00000481999 LY96Q9Y6Y9 160 aa11.59□□□□□ -0.55
CHD3-211ENST00000481999 PTPN13Q12923 2485 aa11.59□□□□□ -0.55
CHD3-211ENST00000481999 GPX4P36969 197 aaPredicted RBP11.58□□□□□ -0.56
CHD3-211ENST00000481999 GPR6P46095 362 aaPredicted RBP11.58□□□□□ -0.56
CHD3-211ENST00000481999 SSBP2P81877 361 aaPredicted RBP11.58□□□□□ -0.56
CHD3-211ENST00000481999 LY6G5BQ8NDX9 201 aa11.58□□□□□ -0.56
CHD3-211ENST00000481999 SLC35E1Q96K37 410 aa11.58□□□□□ -0.56
CHD3-211ENST00000481999 TMEM167BQ9NRX6 74 aa11.58□□□□□ -0.56
CHD3-211ENST00000481999 TRAV9-1A0A075B6T8 112 aa11.58□□□□□ -0.56
CHD3-211ENST00000481999 LOC105371242A0A075B767 164 aa11.58□□□□□ -0.56
CHD3-211ENST00000481999 FOXH1O75593 365 aa11.58□□□□□ -0.56
CHD3-211ENST00000481999 RNASE2P10153 161 aaKnown RBP11.58□□□□□ -0.56
CHD3-211ENST00000481999 C2orf83Q53S99 150 aa11.58□□□□□ -0.56
CHD3-211ENST00000481999 C8orf31Q8N9H6 132 aa11.58□□□□□ -0.56
CHD3-211ENST00000481999 NRGNQ92686 78 aa11.58□□□□□ -0.56
CHD3-211ENST00000481999 RPEQ96AT9 228 aa11.58□□□□□ -0.56
CHD3-211ENST00000481999 FCN1O00602 326 aa11.57□□□□□ -0.56
CHD3-211ENST00000481999 PRSS8Q16651 343 aa11.57□□□□□ -0.56
CHD3-211ENST00000481999 HCP5Q6MZN7 132 aa11.57□□□□□ -0.56
CHD3-211ENST00000481999 MIR17HGQ75NE6 70 aa11.57□□□□□ -0.56
CHD3-211ENST00000481999 OR2T6Q8NHC8 308 aa11.57□□□□□ -0.56
CHD3-211ENST00000481999 C8orf46Q8TAG6 207 aa11.57□□□□□ -0.56
CHD3-211ENST00000481999 PRO1933Q9H354 126 aa11.57□□□□□ -0.56
CHD3-211ENST00000481999 ZNF469Q96JG9 3925 aaPredicted RBP11.57□□□□□ -0.56
CHD3-211ENST00000481999 IGHV3-21A0A0B4J1V1 117 aa11.57□□□□□ -0.56
CHD3-211ENST00000481999 A0A1W2PPI3 338 aa11.57□□□□□ -0.56
CHD3-211ENST00000481999 TIMM23O14925 209 aa11.57□□□□□ -0.56
CHD3-211ENST00000481999 ACTL6BO94805 426 aa11.57□□□□□ -0.56
CHD3-211ENST00000481999 HNF1AP20823 631 aa11.57□□□□□ -0.56
CHD3-211ENST00000481999 YPEL3P61236 119 aaPredicted RBP11.57□□□□□ -0.56
CHD3-211ENST00000481999 GBGT1Q8N5D6 347 aa11.57□□□□□ -0.56
CHD3-211ENST00000481999 OR1L8Q8NGR8 309 aa11.57□□□□□ -0.56
CHD3-211ENST00000481999 C14orf144Q96I85 54 aa11.57□□□□□ -0.56
CHD3-211ENST00000481999 C19orf24Q9BVV8 132 aa11.57□□□□□ -0.56
CHD3-211ENST00000481999 FBXL15Q9H469 300 aa11.57□□□□□ -0.56
CHD3-211ENST00000481999 TECRQ9NZ01 308 aaKnown RBP11.57□□□□□ -0.56
CHD3-211ENST00000481999 MRPL36Q9P0J6 103 aaKnown RBP11.57□□□□□ -0.56
CHD3-211ENST00000481999 PAX1P15863 534 aa11.56□□□□□ -0.56
CHD3-211ENST00000481999 PRRX1P54821 245 aa11.56□□□□□ -0.56
CHD3-211ENST00000481999 PSG5Q15238 335 aa11.56□□□□□ -0.56
CHD3-211ENST00000481999 MRPL41Q8IXM3 137 aaKnown RBP11.56□□□□□ -0.56
CHD3-211ENST00000481999 DYNAPQ8N1N2 210 aa11.56□□□□□ -0.56
CHD3-211ENST00000481999 TMEM167AQ8TBQ9 72 aa11.56□□□□□ -0.56
CHD3-211ENST00000481999 IL36BQ9NZH7 164 aa11.56□□□□□ -0.56
CHD3-211ENST00000481999 USF1P22415 310 aaPredicted RBP11.56□□□□□ -0.56
CHD3-211ENST00000481999 ZNF90Q03938 601 aa11.56□□□□□ -0.56
CHD3-211ENST00000481999 PQLC2Q6ZP29 291 aa11.56□□□□□ -0.56
CHD3-211ENST00000481999 REC114Q7Z4M0 266 aa11.56□□□□□ -0.56
CHD3-211ENST00000481999 EAF1Q96JC9 268 aaPredicted RBP11.56□□□□□ -0.56
CHD3-211ENST00000481999 FNDC4Q9H6D8 234 aaPredicted RBP11.56□□□□□ -0.56
CHD3-211ENST00000481999 K7EN84 100 aa11.55□□□□□ -0.56
CHD3-211ENST00000481999 FSTL3O95633 263 aa11.55□□□□□ -0.56
CHD3-211ENST00000481999 SSX2Q16385 188 aa11.55□□□□□ -0.56
CHD3-211ENST00000481999 TNXAQ16473 311 aa11.55□□□□□ -0.56
CHD3-211ENST00000481999 OR10J1P30954 320 aa11.55□□□□□ -0.56
CHD3-211ENST00000481999 TAS2R45P59539 299 aa11.55□□□□□ -0.56
CHD3-211ENST00000481999 FAM71F2Q6NXP2 309 aa11.55□□□□□ -0.56
CHD3-211ENST00000481999 BEND2Q8NDZ0 799 aa11.55□□□□□ -0.56
CHD3-211ENST00000481999 NOL4LQ96MY1 436 aaPredicted RBP11.55□□□□□ -0.56
CHD3-211ENST00000481999 ZNF705GA8MUZ8 300 aaPredicted RBP11.54□□□□□ -0.56
CHD3-211ENST00000481999 LY6LH3BQJ8 138 aa11.54□□□□□ -0.56
CHD3-211ENST00000481999 J3QKU1 62 aa11.54□□□□□ -0.56
CHD3-211ENST00000481999 VMO1Q7Z5L0 202 aa11.54□□□□□ -0.56
CHD3-211ENST00000481999 TNFRSF14Q92956 283 aa11.54□□□□□ -0.56
CHD3-211ENST00000481999 HELZ2Q9BYK8 2649 aaKnown RBP11.54□□□□□ -0.56
CHD3-211ENST00000481999 IGHV4-39P01824 125 aa11.54□□□□□ -0.56
CHD3-211ENST00000481999 OR5G3P0C626 314 aa11.54□□□□□ -0.56
CHD3-211ENST00000481999 MC5RP33032 325 aa11.54□□□□□ -0.56
CHD3-211ENST00000481999 GNG4P50150 75 aa11.54□□□□□ -0.56
CHD3-211ENST00000481999 EFNA4P52798 201 aa11.54□□□□□ -0.56
CHD3-211ENST00000481999 MFAP2P55001 183 aa11.54□□□□□ -0.56
CHD3-211ENST00000481999 CD69Q07108 199 aa11.54□□□□□ -0.56
CHD3-211ENST00000481999 IQCJQ1A5X6 159 aa11.54□□□□□ -0.56
CHD3-211ENST00000481999 CACNG8Q8WXS5 425 aa11.54□□□□□ -0.56
CHD3-211ENST00000481999 ANKRD17O75179 2603 aaKnown RBP11.54□□□□□ -0.56
CHD3-211ENST00000481999 HELTA6NFD8 242 aa11.53□□□□□ -0.56
CHD3-211ENST00000481999 OR7C2O60412 319 aa11.53□□□□□ -0.56
CHD3-211ENST00000481999 VMA21Q3ZAQ7 101 aa11.53□□□□□ -0.56
CHD3-211ENST00000481999 FAM103A1Q9BTL3 118 aaKnown RBP11.53□□□□□ -0.56
CHD3-211ENST00000481999 SIGLEC9Q9Y336 463 aa11.53□□□□□ -0.56
CHD3-211ENST00000481999 INS-IGF2F8WCM5 200 aa11.53□□□□□ -0.56
CHD3-211ENST00000481999 SLC17A3O00476 420 aa11.53□□□□□ -0.56
CHD3-211ENST00000481999 ADMP35318 185 aa11.53□□□□□ -0.56
CHD3-211ENST00000481999 ERVFC1-1P60608 527 aa11.53□□□□□ -0.56
CHD3-211ENST00000481999 ERHP84090 104 aaKnown RBP11.53□□□□□ -0.56
CHD3-211ENST00000481999 ZNF664Q8N3J9 261 aa11.53□□□□□ -0.56
CHD3-211ENST00000481999 VSTM2AQ8TAG5 236 aa11.53□□□□□ -0.56
CHD3-211ENST00000481999 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.53□□□□□ -0.565e-6■□□□□ 9.9
CHD3-211ENST00000481999 SNRPCP09234 159 aaKnown RBP11.52□□□□□ -0.56
CHD3-211ENST00000481999 CRYBB3P26998 211 aa11.52□□□□□ -0.56
CHD3-211ENST00000481999 HTR1DP28221 377 aa11.52□□□□□ -0.56
CHD3-211ENST00000481999 SELENOTP62341 195 aa11.52□□□□□ -0.56
CHD3-211ENST00000481999 RPEL1Q2QD12 228 aa11.52□□□□□ -0.56
CHD3-211ENST00000481999 CENPWQ5EE01 88 aa11.52□□□□□ -0.56
CHD3-211ENST00000481999 ZNF503Q96F45 646 aa11.52□□□□□ -0.56
CHD3-211ENST00000481999 FASNP49327 2511 aaKnown RBP11.52□□□□□ -0.56
CHD3-211ENST00000481999 TENM4Q6N022 2769 aa11.52□□□□□ -0.57
CHD3-211ENST00000481999 IGLC7A0M8Q6 106 aa11.52□□□□□ -0.57
CHD3-211ENST00000481999 A8MWP6 167 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms