RNA–Protein interactions for RNA: ENST00000481991.1

USP54-213, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 403 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-213ENST00000481991 F6UB75 175 aa5.33□□□□□ -1.56
USP54-213ENST00000481991 SSX5O60225 188 aa5.33□□□□□ -1.56
USP54-213ENST00000481991 CLN5O75503 358 aa5.33□□□□□ -1.56
USP54-213ENST00000481991 RORCP51449 518 aa5.33□□□□□ -1.56
USP54-213ENST00000481991 FABP5Q01469 135 aa5.33□□□□□ -1.56
USP54-213ENST00000481991 TRAM1Q15629 374 aa5.33□□□□□ -1.56
USP54-213ENST00000481991 MSMO1Q15800 293 aa5.33□□□□□ -1.56
USP54-213ENST00000481991 ESRGQ1W209 222 aa5.33□□□□□ -1.56
USP54-213ENST00000481991 TMEM69Q5SWH9 247 aa5.33□□□□□ -1.56
USP54-213ENST00000481991 FAM78BQ5VT40 261 aa5.33□□□□□ -1.56
USP54-213ENST00000481991 CDPF1Q6NVV7 123 aa5.33□□□□□ -1.56
USP54-213ENST00000481991 C8orf59Q8N0T1 100 aaPredicted RBP5.33□□□□□ -1.56
USP54-213ENST00000481991 OR6F1Q8NGZ6 308 aa5.33□□□□□ -1.56
USP54-213ENST00000481991 SAV1Q9H4B6 383 aaPredicted RBP5.33□□□□□ -1.56
USP54-213ENST00000481991 ENY2Q9NPA8 101 aa5.33□□□□□ -1.56
USP54-213ENST00000481991 TRAV30A0A087WSZ9 112 aa5.32□□□□□ -1.56
USP54-213ENST00000481991 TRAV26-1A0A087WT03 109 aa5.32□□□□□ -1.56
USP54-213ENST00000481991 KRTAP29-1A8MX34 341 aaPredicted RBP5.32□□□□□ -1.56
USP54-213ENST00000481991 EBAG9O00559 213 aa5.32□□□□□ -1.56
USP54-213ENST00000481991 PLA2G1BP04054 148 aaKnown RBP5.32□□□□□ -1.56
USP54-213ENST00000481991 DNAH10OSP0CZ25 163 aa5.32□□□□□ -1.56
USP54-213ENST00000481991 RAB3BP20337 219 aa5.32□□□□□ -1.56
USP54-213ENST00000481991 MYL9P24844 172 aa5.32□□□□□ -1.56
USP54-213ENST00000481991 ALDH3B2P48448 385 aa5.32□□□□□ -1.56
USP54-213ENST00000481991 HSPE1P61604 102 aaKnown RBP5.32□□□□□ -1.56
USP54-213ENST00000481991 PRCDQ00LT1 54 aa5.32□□□□□ -1.56
USP54-213ENST00000481991 DHODHQ02127 395 aa5.32□□□□□ -1.56
USP54-213ENST00000481991 FOXI2Q6ZQN5 318 aa5.32□□□□□ -1.56
USP54-213ENST00000481991 CMTM1Q8IZ96 169 aa5.32□□□□□ -1.56
USP54-213ENST00000481991 SLC35G3Q8N808 338 aa5.32□□□□□ -1.56
USP54-213ENST00000481991 BORCS5Q969J3 196 aa5.32□□□□□ -1.56
USP54-213ENST00000481991 ABHD1Q96SE0 405 aa5.32□□□□□ -1.56
USP54-213ENST00000481991 LINC01587Q99440 93 aa5.32□□□□□ -1.56
USP54-213ENST00000481991 PDCD10Q9BUL8 212 aa5.32□□□□□ -1.56
USP54-213ENST00000481991 DAPK2Q9UIK4 370 aa5.32□□□□□ -1.56
USP54-213ENST00000481991 TRAV18A0A075B6X5 111 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 MEIS3P1A6NDR6 274 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 IL4P05112 153 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 AZU1P20160 251 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 PSMA1P25786 263 aaKnown RBP5.31□□□□□ -1.56
USP54-213ENST00000481991 S100GP29377 79 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 ETV6P41212 452 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 IZUMO4Q1ZYL8 232 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 PHLDA2Q53GA4 152 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 ZNF709Q8N972 641 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 DEFB104AQ8WTQ1 72 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 ZNF2Q9BSG1 426 aaPredicted RBP5.31□□□□□ -1.56
USP54-213ENST00000481991 PBDC1Q9BVG4 233 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 FNDC4Q9H6D8 234 aaPredicted RBP5.31□□□□□ -1.56
USP54-213ENST00000481991 SCPEP1Q9HB40 452 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 S100A14Q9HCY8 104 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 ACOT13Q9NPJ3 140 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 PLCXD1Q9NUJ7 323 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 PPP1R14DQ9NXH3 145 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 SCN3BQ9NY72 215 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 EHFQ9NZC4 300 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 MRPL36Q9P0J6 103 aaKnown RBP5.31□□□□□ -1.56
USP54-213ENST00000481991 KLK11Q9UBX7 282 aa5.31□□□□□ -1.56
USP54-213ENST00000481991 RRP15Q9Y3B9 282 aaKnown RBP5.31□□□□□ -1.56
USP54-213ENST00000481991 CORTO00230 105 aa5.3□□□□□ -1.56
USP54-213ENST00000481991 PMP2P02689 132 aa5.3□□□□□ -1.56
USP54-213ENST00000481991 GNAO1P09471 354 aa5.3□□□□□ -1.56
USP54-213ENST00000481991 CBX5P45973 191 aa5.3□□□□□ -1.56
USP54-213ENST00000481991 RFX2P48378 723 aa5.3□□□□□ -1.56
USP54-213ENST00000481991 SMCPP49901 116 aaPredicted RBP5.3□□□□□ -1.56
USP54-213ENST00000481991 LCE2CQ5TA81 110 aa5.3□□□□□ -1.56
USP54-213ENST00000481991 LAIR2Q6ISS4 152 aa5.3□□□□□ -1.56
USP54-213ENST00000481991 HOGA1Q86XE5 327 aa5.3□□□□□ -1.56
USP54-213ENST00000481991 CADM3Q8N126 398 aa5.3□□□□□ -1.56
USP54-213ENST00000481991 ZNF114Q8NC26 417 aa5.3□□□□□ -1.56
USP54-213ENST00000481991 OR5AP2Q8NGF4 316 aa5.3□□□□□ -1.56
USP54-213ENST00000481991 OR4X1Q8NH49 305 aa5.3□□□□□ -1.56
USP54-213ENST00000481991 MRGPRFQ96AM1 343 aa5.3□□□□□ -1.56
USP54-213ENST00000481991 PPP1R14BQ96C90 147 aa5.3□□□□□ -1.56
USP54-213ENST00000481991 IGF2BP2-AS1Q96M15 143 aa5.3□□□□□ -1.56
USP54-213ENST00000481991 SEPSECSQ9HD40 501 aaKnown RBP5.3□□□□□ -1.56
USP54-213ENST00000481991 NOP10Q9NPE3 64 aaKnown RBP5.3□□□□□ -1.56
USP54-213ENST00000481991 IFT46Q9NQC8 304 aa5.3□□□□□ -1.56
USP54-213ENST00000481991 U3KQE9 123 aa5.3□□□□□ -1.56
USP54-213ENST00000481991 A0A087WTM6 91 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 IGLV5-52A0A0A0MRZ9 124 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 M0R2Z0 102 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 BUB3O43684 328 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 GSTZ1O43708 216 aaPredicted RBP5.29□□□□□ -1.56
USP54-213ENST00000481991 IGKV1-17P01599 117 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 RD3LP0DJH9 198 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 M6PRP20645 277 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 OR10J1P30954 320 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 PAX9P55771 341 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 ZNF79Q15937 498 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 SPINK13Q1W4C9 94 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 SPATA31B1PQ5VZV4 182 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 OR51G1Q8NGK1 321 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 OR1S2Q8NGQ3 325 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 RXFP4Q8TDU9 374 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 C16orf92Q96LL3 132 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 WDR12Q9GZL7 423 aaKnown RBP5.29□□□□□ -1.56
USP54-213ENST00000481991 RPRMQ9NS64 109 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 PFDN2Q9UHV9 154 aa5.29□□□□□ -1.56
USP54-213ENST00000481991 LSM2Q9Y333 95 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms