RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 A0A0G2JRQ6 117 aa6.75□□□□□ -1.33
SMARCE1-210ENST00000481231 SMIM31A0A1B0GVY4 71 aa6.75□□□□□ -1.33
SMARCE1-210ENST00000481231 HELTA6NFD8 242 aa6.75□□□□□ -1.33
SMARCE1-210ENST00000481231 SCGB2A1O75556 95 aa6.75□□□□□ -1.33
SMARCE1-210ENST00000481231 TRIM16LQ309B1 348 aa6.75□□□□□ -1.33
SMARCE1-210ENST00000481231 BSXQ3C1V8 233 aa6.75□□□□□ -1.33
SMARCE1-210ENST00000481231 SP6Q3SY56 376 aa6.75□□□□□ -1.33
SMARCE1-210ENST00000481231 C1orf134Q5TEV5 83 aa6.75□□□□□ -1.33
SMARCE1-210ENST00000481231 C16orf54Q6UWD8 224 aa6.75□□□□□ -1.33
SMARCE1-210ENST00000481231 LHFPL1Q86WI0 220 aa6.75□□□□□ -1.33
SMARCE1-210ENST00000481231 GLMPQ8WWB7 406 aa6.75□□□□□ -1.33
SMARCE1-210ENST00000481231 ZNF486Q96H40 463 aaPredicted RBP6.75□□□□□ -1.33
SMARCE1-210ENST00000481231 PDCD10Q9BUL8 212 aa6.75□□□□□ -1.33
SMARCE1-210ENST00000481231 ENY2Q9NPA8 101 aa6.75□□□□□ -1.33
SMARCE1-210ENST00000481231 C3orf85A0A1B0GTC6 90 aa6.74□□□□□ -1.33
SMARCE1-210ENST00000481231 FAM90A26D6RGX4 464 aa6.74□□□□□ -1.33
SMARCE1-210ENST00000481231 HPGDSO60760 199 aa6.74□□□□□ -1.33
SMARCE1-210ENST00000481231 ATG12O94817 140 aa6.74□□□□□ -1.33
SMARCE1-210ENST00000481231 IGLC1P0CG04 106 aa6.74□□□□□ -1.33
SMARCE1-210ENST00000481231 ELK1P19419 428 aa6.74□□□□□ -1.33
SMARCE1-210ENST00000481231 EIF2B2P49770 351 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-210ENST00000481231 NCS1P62166 190 aa6.74□□□□□ -1.33
SMARCE1-210ENST00000481231 RNASE12Q5GAN4 147 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-210ENST00000481231 RNASE10Q5GAN6 216 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-210ENST00000481231 PRSS54Q6PEW0 395 aa6.74□□□□□ -1.33
SMARCE1-210ENST00000481231 OR1S2Q8NGQ3 325 aa6.74□□□□□ -1.33
SMARCE1-210ENST00000481231 RRNAD1Q96FB5 475 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-210ENST00000481231 NDUFAF3Q9BU61 184 aa6.74□□□□□ -1.33
SMARCE1-210ENST00000481231 XCL2Q9UBD3 114 aa6.74□□□□□ -1.33
SMARCE1-210ENST00000481231 SRRM2Q9UQ35 2752 aaKnown RBP6.74□□□□□ -1.33
SMARCE1-210ENST00000481231 TRAV30A0A087WSZ9 112 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 RPS10-NUDT3A0A1W2PQS6 291 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 H3BMM0 161 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 IFNA10P01566 189 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 CD3DP04234 171 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 HNRNPCP07910 306 aaKnown RBP eCLIP6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 UCP1P25874 307 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 OR10J1P30954 320 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 RND2P52198 227 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 SPCS3P61009 180 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 SNRPD3P62318 126 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 DHODHQ02127 395 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 USF2Q15853 346 aaPredicted RBP6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 AARDQ4LEZ3 155 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 UBE2DNLQ8IWF7 75 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 ARRDC1Q8N5I2 433 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 OR52I2Q8NH67 350 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 RNASE11Q8TAA1 199 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 Q8WTZ3 238 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 C18orf15Q96N68 181 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 C1QTNF4Q9BXJ3 329 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 COPZ2Q9P299 210 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 KLK11Q9UBX7 282 aa6.73□□□□□ -1.33
SMARCE1-210ENST00000481231 IL4P05112 153 aa6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 SLC25A4P12235 298 aa6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 TBPP20226 339 aa6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 HTR2BP41595 481 aa6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 AP2S1P53680 142 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 YPEL3P61236 119 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 NUTF2P61970 127 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 ZNF705AQ6ZN79 300 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 CCDC71LQ8N9Z2 235 aa6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 OR4D10Q8NGI6 311 aa6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 OR13C8Q8NGS7 320 aa6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 OR52E5Q8NH55 327 aa6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 TMEM170AQ8WVE7 144 aa6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 TMEM222Q9H0R3 208 aa6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 SEPSECSQ9HD40 501 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 VCX3AQ9NNX9 186 aa6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 NRN1Q9NPD7 142 aa6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 HEYLQ9NQ87 328 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-210ENST00000481231 FAT1Q14517 4588 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 FLG2Q5D862 2391 aaPredicted RBP6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 A0A087WXM4 84 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 ZNF705FA8MVS1 300 aaPredicted RBP6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 BUB3O43684 328 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 NXPH3O95157 252 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 CDS2O95674 445 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 ZNF705DP0CH99 300 aaPredicted RBP6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 ZNF705BP0CI00 300 aaPredicted RBP6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 HLA-DRB4P13762 266 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 NPY1RP25929 384 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 EMP1P54849 157 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 DEFB1P60022 68 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 VBP1P61758 197 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 C2orf83Q53S99 150 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 SIGLEC15Q6ZMC9 328 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 FAM219AQ8IW50 185 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 SLC24A4Q8NFF2 622 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 TERB2Q8NHR7 220 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 LHFPL5Q8TAF8 219 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 ZFAND1Q8TCF1 268 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 RNASEH2CQ8TDP1 164 aaKnown RBP6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 NPIPB3Q92617 1050 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 ACY3Q96HD9 319 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 MTFP1Q9UDX5 166 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 CACNG5Q9UF02 275 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 HLA-DRB4X5D2U9 266 aa6.71□□□□□ -1.34
SMARCE1-210ENST00000481231 FAM25AB3EWG3 89 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms