RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 OR5C1Q8NGR4 320 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 SCGB1C1Q8TD33 95 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 RNASEH2CQ8TDP1 164 aaKnown RBP9.37□□□□□ -0.91
PTPRF-213ENST00000481019 CACNG8Q8WXS5 425 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 PHYHIPLQ96FC7 376 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 USMG5Q96IX5 58 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 THYN1Q9P016 225 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 FBXL7Q9UJT9 491 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 A0A0G2JLM5 398 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 RPS10-NUDT3A0A1W2PQS6 291 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 MFSD2BA6NFX1 497 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 FAM223BA6NKX1 122 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 PPP5D1E7EU14 171 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 H3BP45 60 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 K7EIL1 84 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 OVOL1O14753 267 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 CST7O76096 145 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 METTL15P1P0C7V9 234 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 OR13C7P0DN81 318 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 GPX4P36969 197 aaPredicted RBP9.36□□□□□ -0.91
PTPRF-213ENST00000481019 NHLH2Q02577 135 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 ATP5G2Q06055 141 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 HAPLN4Q86UW8 402 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 FAM223AQ8IWN6 122 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 ZNF114Q8NC26 417 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 NECAP1Q8NC96 275 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 OR1P1Q8NH06 330 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 STOML3Q8TAV4 291 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 GNPNAT1Q96EK6 184 aaPredicted RBP9.36□□□□□ -0.91
PTPRF-213ENST00000481019 CCDC140Q96MF4 163 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 ATP5SQ99766 215 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 PEF1Q9UBV8 284 aaKnown RBP9.36□□□□□ -0.91
PTPRF-213ENST00000481019 FBXL17Q9UF56 701 aa9.36□□□□□ -0.91
PTPRF-213ENST00000481019 HUWE1Q7Z6Z7 4374 aaKnown RBP9.36□□□□□ -0.91
PTPRF-213ENST00000481019 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.35□□□□□ -0.91
PTPRF-213ENST00000481019 IGSF23A1L1A6 192 aa9.35□□□□□ -0.91
PTPRF-213ENST00000481019 DEFA4P12838 97 aa9.35□□□□□ -0.91
PTPRF-213ENST00000481019 DLK1P80370 383 aa9.35□□□□□ -0.91
PTPRF-213ENST00000481019 SLC38A11Q08AI6 406 aa9.35□□□□□ -0.91
PTPRF-213ENST00000481019 RAB31Q13636 194 aa9.35□□□□□ -0.91
PTPRF-213ENST00000481019 KLF5Q13887 457 aaPredicted RBP9.35□□□□□ -0.91
PTPRF-213ENST00000481019 OR8G2PQ6IF36 304 aa9.35□□□□□ -0.91
PTPRF-213ENST00000481019 IL34Q6ZMJ4 242 aa9.35□□□□□ -0.91
PTPRF-213ENST00000481019 BAP18Q8IXM2 172 aa9.35□□□□□ -0.91
PTPRF-213ENST00000481019 TMEM217Q8N7C4 229 aa9.35□□□□□ -0.91
PTPRF-213ENST00000481019 LRRC20Q8TCA0 184 aa9.35□□□□□ -0.91
PTPRF-213ENST00000481019 MCRIP2Q9BUT9 160 aaKnown RBP9.35□□□□□ -0.91
PTPRF-213ENST00000481019 TMEM147Q9BVK8 224 aa9.35□□□□□ -0.91
PTPRF-213ENST00000481019 PARD6GQ9BYG4 376 aaPredicted RBP9.35□□□□□ -0.91
PTPRF-213ENST00000481019 UQCC1Q9NVA1 299 aa9.35□□□□□ -0.91
PTPRF-213ENST00000481019 BOLA1Q9Y3E2 137 aa9.35□□□□□ -0.91
PTPRF-213ENST00000481019 COL7A1Q02388 2944 aa9.34□□□□□ -0.91
PTPRF-213ENST00000481019 IGHV3-21A0A0B4J1V1 117 aa9.34□□□□□ -0.91
PTPRF-213ENST00000481019 C15orf62A8K5M9 175 aa9.34□□□□□ -0.91
PTPRF-213ENST00000481019 MPDU1O75352 247 aa9.34□□□□□ -0.91
PTPRF-213ENST00000481019 HIST1H1BP16401 226 aaKnown RBP9.34□□□□□ -0.91
PTPRF-213ENST00000481019 EDN2P20800 178 aa9.34□□□□□ -0.91
PTPRF-213ENST00000481019 SYNJ2BPP57105 145 aa9.34□□□□□ -0.91
PTPRF-213ENST00000481019 RAB14P61106 215 aa9.34□□□□□ -0.91
PTPRF-213ENST00000481019 BSXQ3C1V8 233 aa9.34□□□□□ -0.91
PTPRF-213ENST00000481019 C9orf66Q5T8R8 295 aa9.34□□□□□ -0.91
PTPRF-213ENST00000481019 ACSM6Q6P461 480 aa9.34□□□□□ -0.91
PTPRF-213ENST00000481019 TEX261Q6UWH6 196 aa9.34□□□□□ -0.91
PTPRF-213ENST00000481019 NPVFQ9HCQ7 196 aa9.34□□□□□ -0.91
PTPRF-213ENST00000481019 C17orf112F2Z3M2 114 aa9.33□□□□□ -0.92
PTPRF-213ENST00000481019 SCGB2A1O75556 95 aa9.33□□□□□ -0.92
PTPRF-213ENST00000481019 RNASE2P10153 161 aaKnown RBP9.33□□□□□ -0.92
PTPRF-213ENST00000481019 CLINT1Q14677 625 aa9.33□□□□□ -0.92
PTPRF-213ENST00000481019 CLEC19AQ6UXS0 136 aa9.33□□□□□ -0.92
PTPRF-213ENST00000481019 ADAMTSL5Q6ZMM2 481 aa9.33□□□□□ -0.92
PTPRF-213ENST00000481019 ZNF709Q8N972 641 aa9.33□□□□□ -0.92
PTPRF-213ENST00000481019 ST8SIA2Q92186 375 aa9.33□□□□□ -0.92
PTPRF-213ENST00000481019 OR4C12Q96R67 309 aa9.33□□□□□ -0.92
PTPRF-213ENST00000481019 SMIM3Q9BZL3 60 aa9.33□□□□□ -0.92
PTPRF-213ENST00000481019 KCNIP2Q9NS61 270 aa9.33□□□□□ -0.92
PTPRF-213ENST00000481019 UBQLN2Q9UHD9 624 aa9.33□□□□□ -0.92
PTPRF-213ENST00000481019 F11RQ9Y624 299 aaKnown RBP9.33□□□□□ -0.92
PTPRF-213ENST00000481019 F8W735 103 aaPredicted RBP9.32□□□□□ -0.92
PTPRF-213ENST00000481019 SAP30O75446 220 aa9.32□□□□□ -0.92
PTPRF-213ENST00000481019 OR2C1O95371 312 aa9.32□□□□□ -0.92
PTPRF-213ENST00000481019 SEC11BP0C7V7 166 aa9.32□□□□□ -0.92
PTPRF-213ENST00000481019 RAB5CP51148 216 aa9.32□□□□□ -0.92
PTPRF-213ENST00000481019 RPL7L1Q6DKI1 246 aaKnown RBP9.32□□□□□ -0.92
PTPRF-213ENST00000481019 ZNF502Q8TBZ5 544 aa9.32□□□□□ -0.92
PTPRF-213ENST00000481019 MRAPQ8TCY5 172 aa9.32□□□□□ -0.92
PTPRF-213ENST00000481019 SCARB1Q8WTV0 552 aa9.32□□□□□ -0.92
PTPRF-213ENST00000481019 ZNF414Q96IQ9 312 aa9.32□□□□□ -0.92
PTPRF-213ENST00000481019 SLC35E1Q96K37 410 aa9.32□□□□□ -0.92
PTPRF-213ENST00000481019 PRR25Q96S07 402 aa9.32□□□□□ -0.92
PTPRF-213ENST00000481019 CYTL1Q9NRR1 136 aa9.32□□□□□ -0.92
PTPRF-213ENST00000481019 PMS2P5A8MQ11 134 aa9.31□□□□□ -0.92
PTPRF-213ENST00000481019 UMAD1C9J7I0 102 aa9.31□□□□□ -0.92
PTPRF-213ENST00000481019 K7EIM0 57 aa9.31□□□□□ -0.92
PTPRF-213ENST00000481019 RGS13O14921 159 aa9.31□□□□□ -0.92
PTPRF-213ENST00000481019 CSN3P07498 182 aa9.31□□□□□ -0.92
PTPRF-213ENST00000481019 ZP3P21754 424 aa9.31□□□□□ -0.92
PTPRF-213ENST00000481019 SERF2P84101 59 aa9.31□□□□□ -0.92
PTPRF-213ENST00000481019 RPEL1Q2QD12 228 aa9.31□□□□□ -0.92
PTPRF-213ENST00000481019 VWC2Q2TAL6 325 aa9.31□□□□□ -0.92
PTPRF-213ENST00000481019 PVRIGQ6DKI7 326 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms