RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 GINS3Q9BRX5 216 aa15.1■□□□□ 0.01
VPS36-204ENST00000480923 RBKSQ9H477 322 aa15.1■□□□□ 0.01
VPS36-204ENST00000480923 MRPL36Q9P0J6 103 aaKnown RBP15.1■□□□□ 0.01
VPS36-204ENST00000480923 HSPB7Q9UBY9 170 aa15.1■□□□□ 0.01
VPS36-204ENST00000480923 HUWE1Q7Z6Z7 4374 aaKnown RBP15.09■□□□□ 0.01
VPS36-204ENST00000480923 TRAV14DV4A0A0A6YYC5 116 aa15.09■□□□□ 0.01
VPS36-204ENST00000480923 TSPAN4O14817 238 aa15.09■□□□□ 0.01
VPS36-204ENST00000480923 IFNA10P01566 189 aa15.09■□□□□ 0.01
VPS36-204ENST00000480923 NPY1RP25929 384 aa15.09■□□□□ 0.01
VPS36-204ENST00000480923 TOMM20LQ6UXN7 152 aa15.09■□□□□ 0.01
VPS36-204ENST00000480923 NOXA1Q86UR1 476 aa15.09■□□□□ 0.01
VPS36-204ENST00000480923 RNASEH2CQ8TDP1 164 aaKnown RBP15.09■□□□□ 0.01
VPS36-204ENST00000480923 RHPN1-AS1Q9BWJ2 59 aa15.09■□□□□ 0.01
VPS36-204ENST00000480923 TMED3Q9Y3Q3 217 aa15.09■□□□□ 0.01
VPS36-204ENST00000480923 PUS1Q9Y606 427 aaKnown RBP eCLIP15.09■□□□□ 0.01
VPS36-204ENST00000480923 IFNA21P01568 189 aa15.08■□□□□ 0
VPS36-204ENST00000480923 SPATA25Q9BR10 227 aa15.08■□□□□ 0
VPS36-204ENST00000480923 MED28Q9H204 178 aa15.08■□□□□ 0
VPS36-204ENST00000480923 IGHV3OR16-13A0A075B7E8 117 aa15.07■□□□□ 0
VPS36-204ENST00000480923 IGHV3-74A0A0B4J1X5 117 aa15.07■□□□□ 0
VPS36-204ENST00000480923 CHEK1O14757 476 aa15.07■□□□□ 0
VPS36-204ENST00000480923 HOXB5P09067 269 aa15.07■□□□□ 0
VPS36-204ENST00000480923 SLC25A4P12235 298 aa15.07■□□□□ 0
VPS36-204ENST00000480923 TMEM170AQ8WVE7 144 aa15.07■□□□□ 0
VPS36-204ENST00000480923 RNF2Q99496 336 aa15.07■□□□□ 0
VPS36-204ENST00000480923 U3KQ87 197 aa15.07■□□□□ 0
VPS36-204ENST00000480923 TRAV30A0A087WSZ9 112 aa15.06■□□□□ 0
VPS36-204ENST00000480923 RBMY1BA6NDE4 496 aaKnown RBP15.06■□□□□ 0
VPS36-204ENST00000480923 RBMY1EA6NEQ0 496 aaKnown RBP15.06■□□□□ 0
VPS36-204ENST00000480923 RBMY1DP0C7P1 496 aaKnown RBP15.06■□□□□ 0
VPS36-204ENST00000480923 BMI1P35226 326 aa15.06■□□□□ 0
VPS36-204ENST00000480923 RND2P52198 227 aa15.06■□□□□ 0
VPS36-204ENST00000480923 ETFRF1Q6IPR1 90 aa15.06■□□□□ 0
VPS36-204ENST00000480923 PRSS54Q6PEW0 395 aa15.06■□□□□ 0
VPS36-204ENST00000480923 LINC00322Q6ZN03 302 aaPredicted RBP15.06■□□□□ 0
VPS36-204ENST00000480923 ZFAND3Q9H8U3 227 aa15.06■□□□□ 0
VPS36-204ENST00000480923 OR4C46A6NHA9 309 aa15.05■□□□□ -0
VPS36-204ENST00000480923 TIGITQ495A1 244 aa15.05■□□□□ -0
VPS36-204ENST00000480923 GGNBP1Q5YKI7 109 aa15.05■□□□□ -0
VPS36-204ENST00000480923 UBQLN2Q9UHD9 624 aa15.05■□□□□ -0
VPS36-204ENST00000480923 IGKV3-7A0A075B6H7 116 aa15.04■□□□□ -0
VPS36-204ENST00000480923 PITX3O75364 302 aa15.04■□□□□ -0
VPS36-204ENST00000480923 ADAP1O75689 374 aa15.04■□□□□ -0
VPS36-204ENST00000480923 SLC25A6P12236 298 aa15.04■□□□□ -0
VPS36-204ENST00000480923 RRAS2P62070 204 aaPredicted RBP15.04■□□□□ -0
VPS36-204ENST00000480923 OR1S2Q8NGQ3 325 aa15.04■□□□□ -0
VPS36-204ENST00000480923 IGHV3-66A0A0C4DH42 116 aa15.03■□□□□ -0
VPS36-204ENST00000480923 GOSR2O14653 212 aa15.03■□□□□ -0
VPS36-204ENST00000480923 IGKV1-17P01599 117 aa15.03■□□□□ -0
VPS36-204ENST00000480923 IFNA4P05014 189 aa15.03■□□□□ -0
VPS36-204ENST00000480923 IAPPP10997 89 aa15.03■□□□□ -0
VPS36-204ENST00000480923 OR10J1P30954 320 aa15.03■□□□□ -0
VPS36-204ENST00000480923 TFPI2P48307 235 aa15.03■□□□□ -0
VPS36-204ENST00000480923 GSG1LQ6UXU4 331 aa15.03■□□□□ -0
VPS36-204ENST00000480923 ST8SIA2Q92186 375 aa15.03■□□□□ -0
VPS36-204ENST00000480923 NPIPB3Q92617 1050 aa15.03■□□□□ -0
VPS36-204ENST00000480923 ACY3Q96HD9 319 aa15.03■□□□□ -0
VPS36-204ENST00000480923 RETNQ9HD89 108 aa15.03■□□□□ -0
VPS36-204ENST00000480923 MGAT4CQ9UBM8 478 aa15.03■□□□□ -0
VPS36-204ENST00000480923 hCG_2014768A0A024R1R8 64 aa15.02■□□□□ -0
VPS36-204ENST00000480923 C5orf51A6NDU8 294 aa15.02■□□□□ -0
VPS36-204ENST00000480923 FAM25EA8MYX2 175 aa15.02■□□□□ -0
VPS36-204ENST00000480923 FAM90A26D6RGX4 464 aa15.02■□□□□ -0
VPS36-204ENST00000480923 MED6O75586 246 aa15.02■□□□□ -0
VPS36-204ENST00000480923 APOHP02749 345 aaPredicted RBP15.02■□□□□ -0
VPS36-204ENST00000480923 IGLC1P0CG04 106 aa15.02■□□□□ -0
VPS36-204ENST00000480923 NPPCP23582 126 aa15.02■□□□□ -0
VPS36-204ENST00000480923 TCF24Q7RTU0 167 aa15.02■□□□□ -0
VPS36-204ENST00000480923 CCSO14618 274 aa15.01□□□□□ -0.01
VPS36-204ENST00000480923 ATP5IP56385 69 aaPredicted RBP15.01□□□□□ -0.01
VPS36-204ENST00000480923 FCN2Q15485 313 aa15.01□□□□□ -0.01
VPS36-204ENST00000480923 GBGT1Q8N5D6 347 aa15.01□□□□□ -0.01
VPS36-204ENST00000480923 Q8WTZ3 238 aa15.01□□□□□ -0.01
VPS36-204ENST00000480923 CITED4Q96RK1 184 aa15.01□□□□□ -0.01
VPS36-204ENST00000480923 METTL26Q96S19 204 aa15.01□□□□□ -0.01
VPS36-204ENST00000480923 GGTLC1Q9BX51 225 aa15.01□□□□□ -0.01
VPS36-204ENST00000480923 TMEM231Q9H6L2 316 aa15.01□□□□□ -0.01
VPS36-204ENST00000480923 VSIRQ9H7M9 311 aa15.01□□□□□ -0.01
VPS36-204ENST00000480923 PAIP2BQ9ULR5 123 aaKnown RBP15.01□□□□□ -0.01
VPS36-204ENST00000480923 LOC102724200A0A096LPH7 203 aaPredicted RBP15□□□□□ -0.01
VPS36-204ENST00000480923 A0A1B0GVG6 124 aa15□□□□□ -0.01
VPS36-204ENST00000480923 CD5P06127 495 aa15□□□□□ -0.01
VPS36-204ENST00000480923 YPEL3P61236 119 aaPredicted RBP15□□□□□ -0.01
VPS36-204ENST00000480923 PAFAH1B2P68402 229 aa15□□□□□ -0.01
VPS36-204ENST00000480923 IAH1Q2TAA2 248 aaPredicted RBP15□□□□□ -0.01
VPS36-204ENST00000480923 ODF3L2Q3SX64 289 aa15□□□□□ -0.01
VPS36-204ENST00000480923 FAM90A2PQ658T7 463 aa15□□□□□ -0.01
VPS36-204ENST00000480923 NARS2Q96I59 477 aaKnown RBP15□□□□□ -0.01
VPS36-204ENST00000480923 MAGT1Q9H0U3 335 aa15□□□□□ -0.01
VPS36-204ENST00000480923 A0A1W2PS18 150 aa14.99□□□□□ -0.01
VPS36-204ENST00000480923 MPTX1A8MV57 137 aa14.99□□□□□ -0.01
VPS36-204ENST00000480923 SYNGR2O43760 224 aa14.99□□□□□ -0.01
VPS36-204ENST00000480923 DFFBO76075 338 aa14.99□□□□□ -0.01
VPS36-204ENST00000480923 RAB11AP62491 216 aa14.99□□□□□ -0.01
VPS36-204ENST00000480923 RPL11P62913 178 aaKnown RBP14.99□□□□□ -0.01
VPS36-204ENST00000480923 CYCSP99999 105 aaKnown RBP14.99□□□□□ -0.01
VPS36-204ENST00000480923 WFDC3Q8IUB2 231 aa14.99□□□□□ -0.01
VPS36-204ENST00000480923 LILRB2Q8N423 598 aa14.99□□□□□ -0.01
VPS36-204ENST00000480923 C2orf50Q96LR7 162 aa14.99□□□□□ -0.01
VPS36-204ENST00000480923 CIB3Q96Q77 187 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms