RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 MPV17LQ2QL34 196 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 Q3ZCU0 254 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 HES5Q5TA89 166 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 MINOS1Q5TGZ0 78 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 XAF1Q6GPH4 301 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 Q6P435 159 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 HEPN1Q6WQI6 88 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 STX19Q8N4C7 294 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 ASCC1Q8N9N2 400 aaKnown RBP3.42□□□□□ -1.86
UPF3A-205ENST00000479712 OR51A2Q8NGJ7 313 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 OR13D1Q8NGV5 346 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 OR52E5Q8NH55 327 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 GIMAP1Q8WWP7 306 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 GHSRQ92847 366 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 MALSU1Q96EH3 234 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 PGLYRP3Q96LB9 341 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 ZNF714Q96N38 554 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 PDCD1LG2Q9BQ51 273 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 UQCC2Q9BRT2 126 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 MND1Q9BWT6 205 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 METTL9Q9H1A3 318 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 GAL3ST2Q9H3Q3 398 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 DUSP21Q9H596 190 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 SPACA1Q9HBV2 294 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 SIRT7Q9NRC8 400 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 RBFOX1Q9NWB1 397 aaKnown RBP3.42□□□□□ -1.86
UPF3A-205ENST00000479712 SCN3BQ9NY72 215 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 CKLFQ9UBR5 152 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 ERGIC3Q9Y282 383 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 TPRKBQ9Y3C4 175 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 MINOS1-NBL1R4GNA1 71 aa3.42□□□□□ -1.86
UPF3A-205ENST00000479712 TRGV10A0A0A0MS01 117 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 ODAMA1E959 279 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 NUPR2A6NF83 97 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 ZNF729A6NN14 1252 aaPredicted RBP3.41□□□□□ -1.86
UPF3A-205ENST00000479712 OOSP1A8MZH6 123 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 GABRPO00591 440 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 SC5DO75845 299 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 OR2H2O95918 312 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 PAHP00439 452 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 UBBP0CG47 229 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 CGB3P0DN86 165 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 CGB7P0DN87 165 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 IGHV1-8P0DP01 117 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 RAB3BP20337 219 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 ZNF93P35789 620 aaPredicted RBP3.41□□□□□ -1.86
UPF3A-205ENST00000479712 CEACAM6P40199 344 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 GTF2A1P52655 376 aaPredicted RBP3.41□□□□□ -1.86
UPF3A-205ENST00000479712 AQP4P55087 323 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 EDDM3BP56851 147 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 TPBGQ13641 420 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 RSU1Q15404 277 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 GRK1Q15835 563 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 LRRC75BQ2VPJ9 315 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 RBM48Q5RL73 367 aaKnown RBP3.41□□□□□ -1.86
UPF3A-205ENST00000479712 UBE2UQ5VVX9 321 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 AHSA2Q719I0 299 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 TCF23Q7RTU1 214 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 LYPD6Q86Y78 171 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 C8orf31Q8N9H6 132 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 DUSP18Q8NEJ0 188 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 BPIFB6Q8NFQ5 453 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 ZNF596Q8TC21 504 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 TNFAIP8L1Q8WVP5 186 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 DERL3Q96Q80 235 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 SLC25A2Q9BXI2 301 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 TMEM133Q9H2Q1 129 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 TAS2R4Q9NYW5 299 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 CLEC2DQ9UHP7 191 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 RAB26Q9ULW5 256 aa3.41□□□□□ -1.86
UPF3A-205ENST00000479712 LSM2Q9Y333 95 aaKnown RBP3.41□□□□□ -1.86
UPF3A-205ENST00000479712 PKHD1L1Q86WI1 4243 aa3.4□□□□□ -1.86
UPF3A-205ENST00000479712 IGHV2-26A0A0B4J1V2 119 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 C11orf94C9JXX5 98 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 H3BSH0 61 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 K7EMT4 169 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 M0R2N4 97 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 DEGS1O15121 323 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 ORC5O43913 435 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 HBE1P02100 147 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 TFF1P04155 84 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 UCHL1P09936 223 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 GTF2F2P13984 249 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 CCL3L1P16619 93 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 CTRB1P17538 263 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 CELP19835 753 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 GZMHP20718 246 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 CRHBPP24387 322 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 HTR1DP28221 377 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 CEACAM3P40198 252 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 ZNF138P52744 262 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 RBM11P57052 281 aaKnown RBP3.4□□□□□ -1.87
UPF3A-205ENST00000479712 RAB25P57735 213 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 GABARAPL2P60520 117 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 UBE2MP61081 183 aaKnown RBP3.4□□□□□ -1.87
UPF3A-205ENST00000479712 RAB11AP62491 216 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 MLLT11Q13015 90 aaPredicted RBP3.4□□□□□ -1.87
UPF3A-205ENST00000479712 KLRD1Q13241 179 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 RAB11BQ15907 218 aa3.4□□□□□ -1.87
UPF3A-205ENST00000479712 GAPTQ8N292 157 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms