RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 BMPR1BO00238 502 aa10.09□□□□□ -0.79
CHD3-210ENST00000479080 SCAF4O95104 1147 aaKnown RBP10.09□□□□□ -0.79
CHD3-210ENST00000479080 CTSGP08311 255 aa10.09□□□□□ -0.79
CHD3-210ENST00000479080 LGALS1P09382 135 aaKnown RBP10.09□□□□□ -0.79
CHD3-210ENST00000479080 MFAP4P55083 255 aa10.09□□□□□ -0.79
CHD3-210ENST00000479080 ZNF90Q03938 601 aa10.09□□□□□ -0.79
CHD3-210ENST00000479080 FOXL1Q12952 345 aa10.09□□□□□ -0.79
CHD3-210ENST00000479080 TIGITQ495A1 244 aa10.09□□□□□ -0.79
CHD3-210ENST00000479080 CXorf58Q96LI9 332 aa10.09□□□□□ -0.79
CHD3-210ENST00000479080 GGTLC1Q9BX51 225 aa10.09□□□□□ -0.79
CHD3-210ENST00000479080 PARD6GQ9BYG4 376 aaPredicted RBP10.09□□□□□ -0.79
CHD3-210ENST00000479080 NPVFQ9HCQ7 196 aa10.09□□□□□ -0.79
CHD3-210ENST00000479080 ATRQ13535 2644 aa10.09□□□□□ -0.79
CHD3-210ENST00000479080 ANK2Q01484 3957 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 IGHV4OR15-8A0A075B7B6 117 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 A0A087WW49 117 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 TRBV7-1A0A0A6YYK4 115 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 ANKRD34BA5PLL1 514 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 CYB5BO43169 146 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 TGOLN2O43493 480 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 DFFBO76075 338 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 CLEC3BP05452 202 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 FGF7P21781 194 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 GATA2P23769 480 aaPredicted RBP10.08□□□□□ -0.8
CHD3-210ENST00000479080 OR10J1P30954 320 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 CDX1P47902 265 aaPredicted RBP10.08□□□□□ -0.8
CHD3-210ENST00000479080 AKR1C1Q04828 323 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 DEFB136Q30KP8 78 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 Q56UQ5 140 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 ETFRF1Q6IPR1 90 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 BTNL8Q6UX41 500 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 UBAC2Q8NBM4 344 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 TXN2Q99757 166 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 RSG1Q9BU20 258 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 SH3BGRL3Q9H299 93 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 SLC45A2Q9UMX9 530 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 TENM1Q9UKZ4 2725 aa10.08□□□□□ -0.8
CHD3-210ENST00000479080 A0A0G2JLM5 398 aa10.07□□□□□ -0.8
CHD3-210ENST00000479080 TCRBV4S1A1TA0A5B7 111 aa10.07□□□□□ -0.8
CHD3-210ENST00000479080 TAAR5O14804 337 aa10.07□□□□□ -0.8
CHD3-210ENST00000479080 AGPAT2O15120 278 aa10.07□□□□□ -0.8
CHD3-210ENST00000479080 LINC00869P0C866 280 aa10.07□□□□□ -0.8
CHD3-210ENST00000479080 C4orf3Q8WVX3 66 aa10.07□□□□□ -0.8
CHD3-210ENST00000479080 DUX3Q96PT4 197 aa10.07□□□□□ -0.8
CHD3-210ENST00000479080 ATP6V0BQ99437 205 aa10.07□□□□□ -0.8
CHD3-210ENST00000479080 TRGV9Q99603 122 aa10.07□□□□□ -0.8
CHD3-210ENST00000479080 CITED1Q99966 193 aa10.07□□□□□ -0.8
CHD3-210ENST00000479080 NPCDR1Q9BY65 106 aa10.07□□□□□ -0.8
CHD3-210ENST00000479080 IGHV3-35A0A0C4DH35 117 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 KANTRA0A1W2PQU2 76 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 A0A1W2PRX2 142 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 CFDP00746 253 aaPredicted RBP10.06□□□□□ -0.8
CHD3-210ENST00000479080 ATP6V0CP27449 155 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 NPBWR1P48145 328 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 PRR20EP86478 221 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 PRR20CP86479 221 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 PRR20DP86480 221 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 PRR20BP86481 221 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 PRR20AP86496 221 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 MIC13Q5XKP0 118 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 TEPPQ6URK8 271 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 CYP2G1PQ6ZSU1 146 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 C8orf86Q6ZUL3 223 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 HSD17B11Q8NBQ5 300 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 KLHL30-AS1Q8NEE0 82 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 STOML3Q8TAV4 291 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 GINS3Q9BRX5 216 aa10.06□□□□□ -0.8
CHD3-210ENST00000479080 ZNF471Q9BX82 626 aaPredicted RBP10.06□□□□□ -0.8
CHD3-210ENST00000479080 GNG7O60262 68 aa10.05□□□□□ -0.8
CHD3-210ENST00000479080 YIF1AO95070 293 aa10.05□□□□□ -0.8
CHD3-210ENST00000479080 ARL3P36405 182 aa10.05□□□□□ -0.8
CHD3-210ENST00000479080 FHL3Q13643 280 aa10.05□□□□□ -0.8
CHD3-210ENST00000479080 ZNF266Q14584 549 aa10.05□□□□□ -0.8
CHD3-210ENST00000479080 KHDC1LQ5JSQ8 128 aa10.05□□□□□ -0.8
CHD3-210ENST00000479080 ST8SIA2Q92186 375 aa10.05□□□□□ -0.8
CHD3-210ENST00000479080 RCC1LQ96I51 464 aaKnown RBP10.05□□□□□ -0.8
CHD3-210ENST00000479080 RAX2Q96IS3 184 aa10.05□□□□□ -0.8
CHD3-210ENST00000479080 ZFAND3Q9H8U3 227 aa10.05□□□□□ -0.8
CHD3-210ENST00000479080 PEF1Q9UBV8 284 aaKnown RBP10.05□□□□□ -0.8
CHD3-210ENST00000479080 TSSC4Q9Y5U2 329 aaPredicted RBP10.05□□□□□ -0.8
CHD3-210ENST00000479080 ZFP92A6NM28 416 aa10.04□□□□□ -0.8
CHD3-210ENST00000479080 JTBO76095 146 aa10.04□□□□□ -0.8
CHD3-210ENST00000479080 TOMM40O96008 361 aa10.04□□□□□ -0.8
CHD3-210ENST00000479080 IFNA5P01569 189 aa10.04□□□□□ -0.8
CHD3-210ENST00000479080 PSG1P11464 419 aa10.04□□□□□ -0.8
CHD3-210ENST00000479080 EDN2P20800 178 aa10.04□□□□□ -0.8
CHD3-210ENST00000479080 CAMLGP49069 296 aa10.04□□□□□ -0.8
CHD3-210ENST00000479080 YPEL3P61236 119 aaPredicted RBP10.04□□□□□ -0.8
CHD3-210ENST00000479080 GCSAMLQ5JQS6 135 aa10.04□□□□□ -0.8
CHD3-210ENST00000479080 UNQ9165/PRO28630Q6UXU0 137 aa10.04□□□□□ -0.8
CHD3-210ENST00000479080 PATE2Q6UY27 113 aa10.04□□□□□ -0.8
CHD3-210ENST00000479080 SLC51BQ86UW2 128 aa10.04□□□□□ -0.8
CHD3-210ENST00000479080 STPG3Q8N7X2 389 aa10.04□□□□□ -0.8
CHD3-210ENST00000479080 MDFIQ99750 246 aa10.04□□□□□ -0.8
CHD3-210ENST00000479080 VSIRQ9H7M9 311 aa10.04□□□□□ -0.8
CHD3-210ENST00000479080 IGHV3OR16-8A0A075B7F1 116 aa10.03□□□□□ -0.8
CHD3-210ENST00000479080 BORCS7-ASMTA0A0B4J1R7 106 aa10.03□□□□□ -0.8
CHD3-210ENST00000479080 WI2-2373I1.2A0A1W2PRP0 233 aa10.03□□□□□ -0.8
CHD3-210ENST00000479080 MPDU1O75352 247 aa10.03□□□□□ -0.8
CHD3-210ENST00000479080 OR2C1O95371 312 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms