RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 ERVK-16P61578 105 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 TMEM136Q6ZRR5 245 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 ZNRF1Q8ND25 227 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 LRRC29Q8WV35 223 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 RNF183Q96D59 192 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 GCM1Q9NP62 436 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 SCRT2Q9NQ03 307 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 DUSP13Q9UII6 198 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 ABCA1O95477 2261 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 CNOT1A5YKK6 2376 aaKnown RBP9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 TPRP12270 2363 aaKnown RBP9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 IQCF6A8MYZ5 107 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 SIVA1O15304 175 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 GFRA3O60609 400 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 GCHFRP30047 84 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 EFNB3Q15768 340 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 MOB3BQ86TA1 216 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 BPIFA4PQ86YQ2 179 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 STPG3Q8N7X2 389 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 CITED1Q99966 193 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 TMEM140Q9NV12 185 aa9.06□□□□□ -0.96
LRRFIP1-211ENST00000478958 TNRC18O15417 2968 aaPredicted RBP9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 ZNF134P52741 427 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 COX19Q49B96 90 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 RNASEKQ6P5S7 137 aaKnown RBP9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 ADAMTSL5Q6ZMM2 481 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 SMIM20Q8N5G0 67 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 CD177Q8N6Q3 437 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 KIR3DL3Q8N743 410 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 OR2T6Q8NHC8 308 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 C18orf32Q8TCD1 76 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 RNASE7Q9H1E1 156 aaKnown RBP9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 TNFRSF18Q9Y5U5 241 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 A0A1W2PPM0 123 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 FABP2P12104 132 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 OPRK1P41145 380 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 SSBP2P81877 361 aaPredicted RBP9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 PRR31Q5SQ13 230 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 ZNF418Q8TF45 676 aaPredicted RBP9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 TRIB1Q96RU8 372 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 S1PR3Q99500 378 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 HES4Q9HCC6 221 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 PLCE1Q9P212 2302 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 TCF19Q9Y242 345 aa9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 KLF13Q9Y2Y9 288 aaPredicted RBP9.05□□□□□ -0.96
LRRFIP1-211ENST00000478958 HLA-DQA1P01909 254 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 APCSP02743 223 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 PRDX2P32119 198 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 PSG5Q15238 335 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 FAM201AQ5SY85 155 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 NHLRC2Q8NBF2 726 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 RAB1CQ92928 201 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 CA1P00915 261 aaPredicted RBP9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 FAM87AP0C7U9 286 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 GAGE5Q13069 117 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 GAGE6Q13070 117 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 KIR3DS1Q14943 382 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 PQLC2Q6ZP29 291 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 C1orf229Q6ZS94 237 aaPredicted RBP9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 MIR17HGQ75NE6 70 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 NEU4Q8WWR8 484 aaPredicted RBP9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 C1orf159Q96HA4 380 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 TMEM191AQ9H0A3 160 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 CXXC4Q9H2H0 198 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 CLCF1Q9UBD9 225 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 HILPDAQ9Y5L2 63 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 DMXL2Q8TDJ6 3036 aa9.04□□□□□ -0.96
LRRFIP1-211ENST00000478958 SNAI2O43623 268 aa9.03□□□□□ -0.96
LRRFIP1-211ENST00000478958 MGST1P10620 155 aaKnown RBP9.03□□□□□ -0.96
LRRFIP1-211ENST00000478958 GNG4P50150 75 aa9.03□□□□□ -0.96
LRRFIP1-211ENST00000478958 TEPPQ6URK8 271 aa9.03□□□□□ -0.96
LRRFIP1-211ENST00000478958 ZNF257Q9Y2Q1 563 aa9.03□□□□□ -0.96
LRRFIP1-211ENST00000478958 C15orf65H3BRN8 121 aa9.03□□□□□ -0.96
LRRFIP1-211ENST00000478958 AMY1AP04745 511 aa9.03□□□□□ -0.96
LRRFIP1-211ENST00000478958 PF4V1P10720 104 aa9.03□□□□□ -0.96
LRRFIP1-211ENST00000478958 VDAC2P45880 294 aaPredicted RBP9.03□□□□□ -0.96
LRRFIP1-211ENST00000478958 ZNF718Q3SXZ3 478 aa9.03□□□□□ -0.96
LRRFIP1-211ENST00000478958 FOXI2Q6ZQN5 318 aa9.03□□□□□ -0.96
LRRFIP1-211ENST00000478958 ERG28Q9UKR5 140 aa9.03□□□□□ -0.96
LRRFIP1-211ENST00000478958 INTS1Q8N201 2190 aaKnown RBP9.03□□□□□ -0.96
LRRFIP1-211ENST00000478958 B5MCH6 92 aa9.02□□□□□ -0.96
LRRFIP1-211ENST00000478958 MPDU1O75352 247 aa9.02□□□□□ -0.96
LRRFIP1-211ENST00000478958 ID1P41134 155 aa9.02□□□□□ -0.96
LRRFIP1-211ENST00000478958 REG1BP48304 166 aa9.02□□□□□ -0.96
LRRFIP1-211ENST00000478958 CX3CL1P78423 397 aa9.02□□□□□ -0.96
LRRFIP1-211ENST00000478958 TRIP6Q15654 476 aaKnown RBP9.02□□□□□ -0.96
LRRFIP1-211ENST00000478958 CENPWQ5EE01 88 aa9.02□□□□□ -0.96
LRRFIP1-211ENST00000478958 DHRS13Q6UX07 377 aa9.02□□□□□ -0.96
LRRFIP1-211ENST00000478958 TET2Q6N021 2002 aaPredicted RBP9.02□□□□□ -0.96
LRRFIP1-211ENST00000478958 ATP5G2Q06055 141 aa9.02□□□□□ -0.97
LRRFIP1-211ENST00000478958 MLANAQ16655 118 aa9.02□□□□□ -0.97
LRRFIP1-211ENST00000478958 SPRNQ5BIV9 151 aa9.02□□□□□ -0.97
LRRFIP1-211ENST00000478958 GPR82Q96P67 336 aa9.02□□□□□ -0.97
LRRFIP1-211ENST00000478958 ENY2Q9NPA8 101 aa9.02□□□□□ -0.97
LRRFIP1-211ENST00000478958 ZNF835Q9Y2P0 537 aa9.02□□□□□ -0.97
LRRFIP1-211ENST00000478958 HELTA6NFD8 242 aa9.02□□□□□ -0.97
LRRFIP1-211ENST00000478958 CECR9P0C854 216 aa9.02□□□□□ -0.97
LRRFIP1-211ENST00000478958 ACP1P24666 158 aa9.02□□□□□ -0.97
LRRFIP1-211ENST00000478958 RPL32P62910 135 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms