RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 LHBP01229 141 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 IFNA7P01567 189 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 MUC1P15941 1255 aaPredicted RBP2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 ALOX5APP20292 161 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 CCL1P22362 96 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 GADD45AP24522 165 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 MYL9P24844 172 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 TALDO1P37837 337 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 MYCNOSP40205 109 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 RAB7AP51149 207 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 RPL23P62829 140 aaKnown RBP2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 LCN2P80188 198 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 S100A12P80511 92 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 MRPS10P82664 201 aaKnown RBP2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 ST3GAL4Q11206 333 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 EIF4EBP1Q13541 118 aaPredicted RBP2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 LINC00483Q53H64 154 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 SPRNQ5BIV9 151 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 CLLU1Q5K131 121 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 AADACL4Q5VUY2 407 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 AHSA2Q719I0 299 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 SLC36A1Q7Z2H8 476 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZNF695Q8IW36 515 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 HS3ST5Q8IZT8 346 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 TMEM86BQ8N661 226 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR51L1Q8NGJ5 315 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR8S1Q8NH09 359 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR2AE1Q8NHA4 323 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 LHFPL5Q8TAF8 219 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 CCL17Q92583 94 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 FRZBQ92765 325 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 ISOC2Q96AB3 205 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 MRPL48Q96GC5 212 aaKnown RBP2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 KCTD7Q96MP8 289 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 C6orf62Q9GZU0 229 aaPredicted RBP2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR51V1Q9H2C8 321 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 METTL17Q9H7H0 456 aaPredicted RBP2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 NECAP2Q9NVZ3 263 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 FAM206AQ9NX38 181 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 RFNGQ9Y644 331 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 KPTNQ9Y664 436 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 V9GYH0 126 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 V9GYS6 101 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 CMYA5Q8N3K9 4069 aa2.37□□□□□ -2.03
CDC42BPA-212ENST00000478573 LOC105371267A0A1B0GV96 52 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 NAP1L6A6NFF2 107 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 FABP12A6NFH5 140 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 FAM25EA8MYX2 175 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 TRAPPC2LH3BP13 241 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 J3QT63 122 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 M0R1W7 72 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 TAAR5O14804 337 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 MYL12BO14950 172 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 GSTZ1O43708 216 aaPredicted RBP2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 GATBO75879 557 aaKnown RBP2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 CYB5R3P00387 301 aaPredicted RBP2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 HLA-DQA1P01909 254 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 TTRP02766 147 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 MRPL3P09001 348 aaKnown RBP2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR8U9P0C7N5 309 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 SLC2A1P11166 492 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 MYL12AP19105 171 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 PMCHP20382 165 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 SLC6A1P30531 599 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 PMELP40967 661 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 RPS27P42677 84 aaKnown RBP2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 MAP2K4P45985 399 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 CAV3P56539 151 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 TAS2R43P59537 309 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR2B8PP59922 312 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 RRAS2P62070 204 aaPredicted RBP2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 UBA52P62987 128 aaKnown RBP2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 GNG3P63215 75 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 PITPNAQ00169 270 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 PRDX4Q13162 271 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 GRK1Q15835 563 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 SMIM21Q3B7S5 101 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 MPV17L2Q567V2 206 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 CLVS2Q5SYC1 327 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 BCL2L15Q5TBC7 163 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 TMEM236Q5W0B7 351 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 TMEM42Q69YG0 159 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZNF322Q6U7Q0 402 aaPredicted RBP2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 NAA40Q86UY6 237 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 SLC7A5P1Q8MH63 180 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 C19orf18Q8NEA5 215 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR1M1Q8NGA1 313 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR5A2Q8NGI9 324 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR2T27Q8NH04 317 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR52N1Q8NH53 320 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 THEM6Q8WUY1 208 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZNF488Q96MN9 340 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 AMELYQ99218 206 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 CHST5Q9GZS9 411 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 PBOV1Q9GZY1 135 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 RASL12Q9NYN1 266 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 TVP23BQ9NYZ1 205 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 DNAJC27Q9NZQ0 273 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 SLC22A13Q9Y226 551 aa2.36□□□□□ -2.03
CDC42BPA-212ENST00000478573 PRELID1Q9Y255 219 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms