RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 DCAF16Q9NXF7 216 aa11.67□□□□□ -0.54
NPHP4-208ENST00000478423 CEACAM8P31997 349 aaPredicted RBP11.66□□□□□ -0.54
NPHP4-208ENST00000478423 GNG5P63218 68 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 SRSF4Q08170 494 aaKnown RBP11.66□□□□□ -0.54
NPHP4-208ENST00000478423 ZNF585BQ52M93 769 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 PVRIGQ6DKI7 326 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 FAM159AQ6UWV7 190 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 MAP1LC3AQ9H492 121 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 MYO9AB2RTY4 2548 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 CEP295Q9C0D2 2601 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 CD5P06127 495 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 RNASE7Q9H1E1 156 aaKnown RBP11.66□□□□□ -0.54
NPHP4-208ENST00000478423 TSPOP30536 169 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 SYT8Q8NBV8 401 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 TMEM167AQ8TBQ9 72 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 CRIM1Q9NZV1 1036 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 FAM215AQ9Y5M1 114 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 J3QR89 54 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 IGKV1-16P04430 117 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 WNT2P09544 360 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 LMO1P25800 156 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 NMUP48645 174 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 FAM74A4Q5TZK3 123 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 WDR86Q86TI4 376 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 DUX5Q96PT3 197 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 VPS25Q9BRG1 176 aa11.66□□□□□ -0.54
NPHP4-208ENST00000478423 A0A1B0GUT8 65 aa11.65□□□□□ -0.54
NPHP4-208ENST00000478423 H0YJW9 148 aa11.65□□□□□ -0.54
NPHP4-208ENST00000478423 NBL1P41271 181 aa11.65□□□□□ -0.54
NPHP4-208ENST00000478423 VMO1Q7Z5L0 202 aa11.65□□□□□ -0.54
NPHP4-208ENST00000478423 RAX2Q96IS3 184 aa11.65□□□□□ -0.54
NPHP4-208ENST00000478423 TUBA4BQ9H853 241 aa11.65□□□□□ -0.54
NPHP4-208ENST00000478423 GGCTO75223 188 aaKnown RBP11.65□□□□□ -0.54
NPHP4-208ENST00000478423 DKK1O94907 266 aa11.65□□□□□ -0.54
NPHP4-208ENST00000478423 SRSF9Q13242 221 aaKnown RBP eCLIP11.65□□□□□ -0.54
NPHP4-208ENST00000478423 KLF17Q5JT82 389 aaPredicted RBP11.65□□□□□ -0.54
NPHP4-208ENST00000478423 ZNF600Q6ZNG1 722 aa11.65□□□□□ -0.54
NPHP4-208ENST00000478423 KIR3DL3Q8N743 410 aa11.65□□□□□ -0.54
NPHP4-208ENST00000478423 PRSS33Q8NF86 280 aa11.65□□□□□ -0.54
NPHP4-208ENST00000478423 LIME1Q9H400 295 aa11.65□□□□□ -0.54
NPHP4-208ENST00000478423 ZFP30Q9Y2G7 519 aa11.65□□□□□ -0.54
NPHP4-208ENST00000478423 OCC1Q8TAD7 63 aa11.65□□□□□ -0.54
NPHP4-208ENST00000478423 AP5S1Q9NUS5 200 aa11.65□□□□□ -0.54
NPHP4-208ENST00000478423 STAG3L2P0CL84 134 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 STAG3L3P0CL85 134 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 ZNF502Q8TBZ5 544 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 TRAV5A0A0B4J249 113 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 M0QZK8 103 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 TPTE2P1Q5T6R2 138 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 RNF138Q8WVD3 245 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 NPFFR1Q9GZQ6 430 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 KLK15Q9H2R5 256 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 ZNRD1Q9P1U0 126 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 M0R381 172 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 TMEM136Q6ZRR5 245 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 TMEM219Q86XT9 240 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 OR10AG1Q8NH19 301 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 ATG101Q9BSB4 218 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 ELOVL1Q9BW60 279 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 SEPSECSQ9HD40 501 aaKnown RBP11.64□□□□□ -0.55
NPHP4-208ENST00000478423 EPDR1Q9UM22 224 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 DLX1P56177 255 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 LINC00518Q8N0U6 118 aa11.64□□□□□ -0.55
NPHP4-208ENST00000478423 TRBV20OR9-2A0A075B6H5 130 aa11.63□□□□□ -0.55
NPHP4-208ENST00000478423 HIGD1CA8MV81 97 aa11.63□□□□□ -0.55
NPHP4-208ENST00000478423 PMCHL1Q16048 86 aa11.63□□□□□ -0.55
NPHP4-208ENST00000478423 TMEM183AQ8IXX5 376 aa11.63□□□□□ -0.55
NPHP4-208ENST00000478423 CIARTQ8N365 385 aaPredicted RBP11.63□□□□□ -0.55
NPHP4-208ENST00000478423 FMC1Q96HJ9 113 aa11.63□□□□□ -0.55
NPHP4-208ENST00000478423 RPP21Q9H633 154 aaKnown RBP11.63□□□□□ -0.55
NPHP4-208ENST00000478423 TDGF1P13385 188 aa11.63□□□□□ -0.55
NPHP4-208ENST00000478423 FAM53AQ6NSI3 398 aaPredicted RBP11.63□□□□□ -0.55
NPHP4-208ENST00000478423 LHFPL4Q7Z7J7 247 aa11.63□□□□□ -0.55
NPHP4-208ENST00000478423 OTORQ9NRC9 128 aa11.63□□□□□ -0.55
NPHP4-208ENST00000478423 TRAV1-1A0A0B4J248 108 aa11.63□□□□□ -0.55
NPHP4-208ENST00000478423 C15orf62A8K5M9 175 aa11.63□□□□□ -0.55
NPHP4-208ENST00000478423 SPATA31B1PQ5VZV4 182 aa11.63□□□□□ -0.55
NPHP4-208ENST00000478423 BPESC1Q9GZL8 116 aa11.63□□□□□ -0.55
NPHP4-208ENST00000478423 C9JCJ5 164 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 NUDT3O95989 172 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 ERVK11-1P61568 191 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 BRD3OSQ6XYD6 125 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 CBY3A6NI87 242 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 BUB1B-PAK6H3BSN5 160 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 IGLV3-1P01715 115 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 PSG1P11464 419 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 FOLR2P14207 255 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 RRN3P1Q2M238 152 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 MGST2Q99735 147 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 ANAPC10Q9UM13 185 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 IGLV1-44P01699 117 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 GTF2H5Q6ZYL4 71 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 NAV2Q8IVL1 2488 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 C5orf64Q2M2E5 130 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 ATOH7Q8N100 152 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 OR4X2Q8NGF9 303 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 SIGLEC9Q9Y336 463 aa11.62□□□□□ -0.55
NPHP4-208ENST00000478423 OR4C46A6NHA9 309 aa11.61□□□□□ -0.55
NPHP4-208ENST00000478423 NPIPB6E9PJ23 425 aa11.61□□□□□ -0.55
NPHP4-208ENST00000478423 MINOS1Q5TGZ0 78 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms