RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 DVL1O14640 695 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 NDUFB4O95168 129 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 IGHV3-7P01780 117 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 CT45A6P0DMU7 189 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 CT45A5P0DMU8 189 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 CT45A7P0DMV0 189 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 PPIAL4FP0DN26 164 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 DEFA4P12838 97 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 FABP4P15090 132 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 HIST1H1BP16401 226 aaKnown RBP4□□□□□ -1.77
SF3B6-202ENST00000478050 NDUFB7P17568 137 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 IGFBP2P18065 325 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 USF1P22415 310 aaPredicted RBP4□□□□□ -1.77
SF3B6-202ENST00000478050 IL3RAP26951 378 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 CCKARP32238 428 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 CHRNA7P36544 502 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 PDLIM4P50479 330 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 TDGF1P3P51864 188 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 TAS2R45P59539 299 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 ERHP84090 104 aaKnown RBP4□□□□□ -1.77
SF3B6-202ENST00000478050 FOXL1Q12952 345 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 EFNB3Q15768 340 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 FAM78BQ5VT40 261 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 GFI1BQ5VTD9 330 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 DUX4L9Q6RFH8 374 aaPredicted RBP4□□□□□ -1.77
SF3B6-202ENST00000478050 DOLPP1Q86YN1 238 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 PNKDQ8N490 385 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 LINC00311Q8N616 119 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 C8orf31Q8N9H6 132 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 OR10G8Q8NGN5 311 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 OR4A5Q8NH83 315 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 OR5R1Q8NH85 324 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 ZNF596Q8TC21 504 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 RNASEH2CQ8TDP1 164 aaKnown RBP4□□□□□ -1.77
SF3B6-202ENST00000478050 SSMEM1Q8WWF3 244 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 PACRGQ96M98 296 aaPredicted RBP4□□□□□ -1.77
SF3B6-202ENST00000478050 ZNF714Q96N38 554 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 RNF2Q99496 336 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 HIST1H2BLQ99880 126 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 NABP2Q9BQ15 211 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 ELOVL1Q9BW60 279 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 HINT2Q9BX68 163 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 MRPL32Q9BYC8 188 aaKnown RBP4□□□□□ -1.77
SF3B6-202ENST00000478050 NGBQ9NPG2 151 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 TECRQ9NZ01 308 aaKnown RBP4□□□□□ -1.77
SF3B6-202ENST00000478050 FUT9Q9Y231 359 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 PPIAL4AQ9Y536 164 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 TNCP24821 2201 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 APCP25054 2843 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 ACANP16112 2415 aa4□□□□□ -1.77
SF3B6-202ENST00000478050 COL6A5A8TX70 2615 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 A0A0U1RQK1 487 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 ZNF320A2RRD8 509 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 DPRXA6NFQ7 191 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 H0YJW9 148 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 TMEM178BH3BS89 294 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 K7EM74 188 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 HOXA3O43365 443 aaPredicted RBP3.99□□□□□ -1.77
SF3B6-202ENST00000478050 NDUFB3O43676 98 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 GATCO43716 136 aaKnown RBP3.99□□□□□ -1.77
SF3B6-202ENST00000478050 MMP23AO75900 390 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 GCGP01275 180 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 OR4A8P0C604 315 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 OR5G3P0C626 314 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 LINC00869P0C866 280 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 SAA1P0DJI8 122 aaPredicted RBP3.99□□□□□ -1.77
SF3B6-202ENST00000478050 RNASE2P10153 161 aaKnown RBP3.99□□□□□ -1.77
SF3B6-202ENST00000478050 GPX4P36969 197 aaPredicted RBP3.99□□□□□ -1.77
SF3B6-202ENST00000478050 CNN1P51911 297 aaKnown RBP3.99□□□□□ -1.77
SF3B6-202ENST00000478050 RPL15P61313 204 aaKnown RBP3.99□□□□□ -1.77
SF3B6-202ENST00000478050 RPL31P62899 125 aaKnown RBP3.99□□□□□ -1.77
SF3B6-202ENST00000478050 RPL19P84098 196 aaKnown RBP3.99□□□□□ -1.77
SF3B6-202ENST00000478050 KLRB1Q12918 225 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 JOSD1Q15040 202 aaPredicted RBP3.99□□□□□ -1.77
SF3B6-202ENST00000478050 ADIPOQQ15848 244 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 LRRC10Q5BKY1 277 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 PDZD11Q5EBL8 140 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 UTF1Q5T230 341 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 SPATA31B1PQ5VZV4 182 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 TEX38Q6PEX7 206 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 GFRALQ6UXV0 394 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 PQLC2Q6ZP29 291 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 PDPNQ86YL7 162 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 OR5T1Q8NG75 326 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 OR4P4Q8NGL7 312 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 VSTM2AQ8TAG5 236 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 TMEM167AQ8TBQ9 72 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 CACNG8Q8WXS5 425 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 TMEM18Q96B42 140 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 TMEM186Q96B77 213 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 SFRP2Q96HF1 295 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 HARBI1Q96MB7 349 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 MRPL20Q9BYC9 149 aaKnown RBP3.99□□□□□ -1.77
SF3B6-202ENST00000478050 COMMD5Q9GZQ3 224 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 SAP30LQ9HAJ7 183 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 IL36BQ9NZH7 164 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 ZNF835Q9Y2P0 537 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 YTHDF2Q9Y5A9 579 aaKnown RBP3.99□□□□□ -1.77
SF3B6-202ENST00000478050 TRAPPC1Q9Y5R8 145 aa3.99□□□□□ -1.77
SF3B6-202ENST00000478050 TACC2O95359 2948 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms