RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 MS4A18H0YCH9 400 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 M0QXV9 152 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 CDX4O14627 284 aaPredicted RBP3.85□□□□□ -1.79
PTCD3-212ENST00000477520 CA1P00915 261 aaPredicted RBP3.85□□□□□ -1.79
PTCD3-212ENST00000477520 IGHG3P01860 377 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 IGFBP2P18065 325 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 SRD5A1P18405 259 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 IL11P20809 199 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 EVI2AP22794 236 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 GATA2P23769 480 aaPredicted RBP3.85□□□□□ -1.79
PTCD3-212ENST00000477520 GCHFRP30047 84 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 ATP5G3P48201 142 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 RBM11P57052 281 aaKnown RBP3.85□□□□□ -1.79
PTCD3-212ENST00000477520 CLRN1P58418 232 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 ARL16Q0P5N6 197 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 CATR1Q13166 79 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 FAM53BQ14153 422 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 PDCD1Q15116 288 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 MRPL23Q16540 153 aaKnown RBP3.85□□□□□ -1.79
PTCD3-212ENST00000477520 MS4A18Q3C1V0 323 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 PDLIM3Q53GG5 364 aaPredicted RBP3.85□□□□□ -1.79
PTCD3-212ENST00000477520 PRR30Q53SZ7 412 aaPredicted RBP3.85□□□□□ -1.79
PTCD3-212ENST00000477520 DMRTC1Q5HYR2 192 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 SLC35E4Q6ICL7 350 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 RHBDD2Q6NTF9 364 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 RNASEKQ6P5S7 137 aaKnown RBP3.85□□□□□ -1.79
PTCD3-212ENST00000477520 ZNF818PQ6ZRF7 136 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 FOXL2NBQ6ZUU3 175 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 ASCL5Q7RTU5 278 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 PRSS41Q7RTY9 318 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 ANKRD37Q7Z713 158 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 C17orf82Q86X59 251 aaPredicted RBP3.85□□□□□ -1.79
PTCD3-212ENST00000477520 SFTPA2Q8IWL1 248 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 ATOH7Q8N100 152 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 ZADH2Q8N4Q0 377 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 OR10G6Q8NH81 332 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 C16orf52Q8NHV5 167 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 CCL4L1Q8NHW4 92 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 SLC37A2Q8TED4 501 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 ZNF501Q96CX3 271 aaPredicted RBP3.85□□□□□ -1.79
PTCD3-212ENST00000477520 DNAJA3Q96EY1 480 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 OXGR1Q96P68 337 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 SPAG8Q99932 426 aaPredicted RBP3.85□□□□□ -1.79
PTCD3-212ENST00000477520 SH2D2AQ9NP31 389 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 FSCN3Q9NQT6 498 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 PRTFDC1Q9NRG1 225 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 OR1A1Q9P1Q5 309 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 C19orf25Q9UFG5 118 aaPredicted RBP3.85□□□□□ -1.79
PTCD3-212ENST00000477520 UFC1Q9Y3C8 167 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 SPTBN4Q9H254 2564 aa3.85□□□□□ -1.79
PTCD3-212ENST00000477520 COL5A1P20908 1838 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-212ENST00000477520 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-212ENST00000477520 hCG_38984A0A1B0GV85 526 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 PGPEP1LA6NFU8 196 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 A8MWL6 223 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-212ENST00000477520 K7EN84 100 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 TNFRSF13BO14836 293 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-212ENST00000477520 DUX1O43812 170 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 ZIC3O60481 467 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 SNRNP200O75643 2136 aaKnown RBP3.84□□□□□ -1.79
PTCD3-212ENST00000477520 WISP2O76076 250 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 CD59P13987 128 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 ACP1P24666 158 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 PROK1P58294 105 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 MLF1P58340 268 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 HBBP68871 147 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 TLE1Q04724 770 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 C17orf67Q0P5P2 114 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 MFAP5Q13361 173 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-212ENST00000477520 PPP1R27Q86WC6 154 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 OOSP2Q86WS3 158 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 ZNF114Q8NC26 417 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-212ENST00000477520 OR51H1Q8NH63 302 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 LRRC29Q8WV35 223 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 PPDPFLQ8WWR9 84 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 PATE1Q8WXA2 126 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 PTH2Q96A98 100 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 SPACA5Q96QH8 159 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 HDHD3Q9BSH5 251 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-212ENST00000477520 TPPP3Q9BW30 176 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 HINT2Q9BX68 163 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 TM2D2Q9BX73 214 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 SLC25A2Q9BXI2 301 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 MRPL32Q9BYC8 188 aaKnown RBP3.84□□□□□ -1.79
PTCD3-212ENST00000477520 MAP1LC3AQ9H492 121 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 AKIRIN1Q9H9L7 192 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-212ENST00000477520 FAM60AQ9NP50 221 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 CCL28Q9NRJ3 127 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 LINC00312Q9Y6C7 94 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 AHCTF1Q8WYP5 2266 aa3.84□□□□□ -1.79
PTCD3-212ENST00000477520 SPTBP11277 2137 aa3.83□□□□□ -1.8
PTCD3-212ENST00000477520 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.83□□□□□ -1.8
PTCD3-212ENST00000477520 TRAV25A0A0B4J276 109 aa3.83□□□□□ -1.8
PTCD3-212ENST00000477520 A0A1B0GXF2 115 aa3.83□□□□□ -1.8
PTCD3-212ENST00000477520 hDV102S1A0JD36 115 aa3.83□□□□□ -1.8
PTCD3-212ENST00000477520 FBLL1A6NHQ2 334 aaKnown RBP3.83□□□□□ -1.8
PTCD3-212ENST00000477520 VWC2LB2RUY7 222 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms