RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 RAB11AP62491 216 aa10.98□□□□□ -0.65
CCNL1-217ENST00000476367 ACOT7LQ6ZUV0 252 aa10.98□□□□□ -0.65
CCNL1-217ENST00000476367 NOXA1Q86UR1 476 aa10.98□□□□□ -0.65
CCNL1-217ENST00000476367 OR11H4Q8NGC9 324 aa10.98□□□□□ -0.65
CCNL1-217ENST00000476367 OR9G4Q8NGQ1 327 aa10.98□□□□□ -0.65
CCNL1-217ENST00000476367 CACNG8Q8WXS5 425 aa10.98□□□□□ -0.65
CCNL1-217ENST00000476367 NPIPB3Q92617 1050 aa10.98□□□□□ -0.65
CCNL1-217ENST00000476367 TXN2Q99757 166 aa10.98□□□□□ -0.65
CCNL1-217ENST00000476367 PAIP2BQ9ULR5 123 aaKnown RBP10.98□□□□□ -0.65
CCNL1-217ENST00000476367 DNAH3Q8TD57 4116 aa10.97□□□□□ -0.65
CCNL1-217ENST00000476367 L7N2F9 121 aa10.97□□□□□ -0.65
CCNL1-217ENST00000476367 CLN5O75503 358 aa10.97□□□□□ -0.65
CCNL1-217ENST00000476367 PRB2P02812 416 aaPredicted RBP10.97□□□□□ -0.65
CCNL1-217ENST00000476367 VAMP2P63027 116 aa10.97□□□□□ -0.65
CCNL1-217ENST00000476367 RPP30P78346 268 aaKnown RBP10.97□□□□□ -0.65
CCNL1-217ENST00000476367 UNQ9165/PRO28630Q6UXU0 137 aa10.97□□□□□ -0.65
CCNL1-217ENST00000476367 ZNF320A2RRD8 509 aa10.96□□□□□ -0.65
CCNL1-217ENST00000476367 GNG7O60262 68 aa10.96□□□□□ -0.65
CCNL1-217ENST00000476367 SLC25A4P12235 298 aa10.96□□□□□ -0.65
CCNL1-217ENST00000476367 EDN2P20800 178 aa10.96□□□□□ -0.65
CCNL1-217ENST00000476367 SULT1A1P50225 295 aa10.96□□□□□ -0.65
CCNL1-217ENST00000476367 DEFA6Q01524 100 aa10.96□□□□□ -0.65
CCNL1-217ENST00000476367 EWSR1Q01844 656 aaKnown RBP eCLIP10.96□□□□□ -0.65
CCNL1-217ENST00000476367 SPSB3Q6PJ21 355 aa10.96□□□□□ -0.65
CCNL1-217ENST00000476367 IL34Q6ZMJ4 242 aa10.96□□□□□ -0.65
CCNL1-217ENST00000476367 TMEM217Q8N7C4 229 aa10.96□□□□□ -0.65
CCNL1-217ENST00000476367 PPP1R14BQ96C90 147 aa10.96□□□□□ -0.65
CCNL1-217ENST00000476367 ELOVL1Q9BW60 279 aa10.96□□□□□ -0.65
CCNL1-217ENST00000476367 RNF222A6NCQ9 220 aa10.95□□□□□ -0.66
CCNL1-217ENST00000476367 RLN2P04090 185 aa10.95□□□□□ -0.66
CCNL1-217ENST00000476367 PVALBP20472 110 aaPredicted RBP10.95□□□□□ -0.66
CCNL1-217ENST00000476367 KPRPQ5T749 579 aaPredicted RBP10.95□□□□□ -0.66
CCNL1-217ENST00000476367 ACY3Q96HD9 319 aa10.95□□□□□ -0.66
CCNL1-217ENST00000476367 GAR1Q9NY12 217 aaKnown RBP10.95□□□□□ -0.66
CCNL1-217ENST00000476367 PEMTQ9UBM1 199 aa10.95□□□□□ -0.66
CCNL1-217ENST00000476367 IGHV3OR16-8A0A075B7F1 116 aa10.95□□□□□ -0.66
CCNL1-217ENST00000476367 RPS10-NUDT3A0A1W2PQS6 291 aa10.95□□□□□ -0.66
CCNL1-217ENST00000476367 NUPL2O15504 423 aaKnown RBP10.95□□□□□ -0.66
CCNL1-217ENST00000476367 NPBWR1P48145 328 aa10.95□□□□□ -0.66
CCNL1-217ENST00000476367 DLK1P80370 383 aa10.95□□□□□ -0.66
CCNL1-217ENST00000476367 VWC2Q2TAL6 325 aa10.95□□□□□ -0.66
CCNL1-217ENST00000476367 TIGITQ495A1 244 aa10.95□□□□□ -0.66
CCNL1-217ENST00000476367 FAM106AQ4KMX7 169 aa10.95□□□□□ -0.66
CCNL1-217ENST00000476367 ADAMTSL5Q6ZMM2 481 aa10.95□□□□□ -0.66
CCNL1-217ENST00000476367 TMEM182Q6ZP80 229 aaPredicted RBP10.95□□□□□ -0.66
CCNL1-217ENST00000476367 GPHB5Q86YW7 130 aa10.95□□□□□ -0.66
CCNL1-217ENST00000476367 THAP8Q8NA92 274 aa10.95□□□□□ -0.66
CCNL1-217ENST00000476367 OR10P1Q8NGE3 313 aa10.95□□□□□ -0.66
CCNL1-217ENST00000476367 LSM4Q9Y4Z0 139 aaKnown RBP10.95□□□□□ -0.66
CCNL1-217ENST00000476367 WIPF1O43516 503 aa10.94□□□□□ -0.66
CCNL1-217ENST00000476367 PET100P0DJ07 73 aa10.94□□□□□ -0.66
CCNL1-217ENST00000476367 RPL12P30050 165 aaKnown RBP10.94□□□□□ -0.66
CCNL1-217ENST00000476367 INSL3P51460 131 aa10.94□□□□□ -0.66
CCNL1-217ENST00000476367 KRTAP10-11P60412 298 aa10.94□□□□□ -0.66
CCNL1-217ENST00000476367 ZNF90Q03938 601 aa10.94□□□□□ -0.66
CCNL1-217ENST00000476367 SLC38A11Q08AI6 406 aa10.94□□□□□ -0.66
CCNL1-217ENST00000476367 ETFRF1Q6IPR1 90 aa10.94□□□□□ -0.66
CCNL1-217ENST00000476367 REC114Q7Z4M0 266 aa10.94□□□□□ -0.66
CCNL1-217ENST00000476367 NEURL2Q9BR09 285 aa10.94□□□□□ -0.66
CCNL1-217ENST00000476367 ZFAND3Q9H8U3 227 aa10.94□□□□□ -0.66
CCNL1-217ENST00000476367 WFDC1Q9HC57 220 aa10.94□□□□□ -0.66
CCNL1-217ENST00000476367 TNFSF18Q9UNG2 199 aa10.94□□□□□ -0.66
CCNL1-217ENST00000476367 FNDC10F2Z333 226 aa10.93□□□□□ -0.66
CCNL1-217ENST00000476367 LGALS9O00182 355 aa10.93□□□□□ -0.66
CCNL1-217ENST00000476367 CSN3P07498 182 aa10.93□□□□□ -0.66
CCNL1-217ENST00000476367 OR10J1P30954 320 aa10.93□□□□□ -0.66
CCNL1-217ENST00000476367 FGL1Q08830 312 aa10.93□□□□□ -0.66
CCNL1-217ENST00000476367 EGFEM1PQ0D2K5 195 aa10.93□□□□□ -0.66
CCNL1-217ENST00000476367 TMEM144Q7Z5S9 345 aa10.93□□□□□ -0.66
CCNL1-217ENST00000476367 THAP6Q8TBB0 222 aa10.93□□□□□ -0.66
CCNL1-217ENST00000476367 AQP10Q96PS8 301 aa10.93□□□□□ -0.66
CCNL1-217ENST00000476367 C20orf24Q9BUV8 137 aa10.93□□□□□ -0.66
CCNL1-217ENST00000476367 HSPB11Q9Y547 144 aa10.93□□□□□ -0.66
CCNL1-217ENST00000476367 TMEM213A2RRL7 107 aa10.92□□□□□ -0.66
CCNL1-217ENST00000476367 C2orf70A6NJV1 201 aa10.92□□□□□ -0.66
CCNL1-217ENST00000476367 A8MWP6 167 aa10.92□□□□□ -0.66
CCNL1-217ENST00000476367 RELQ04864 619 aaPredicted RBP10.92□□□□□ -0.66
CCNL1-217ENST00000476367 TM4SF20Q53R12 229 aa10.92□□□□□ -0.66
CCNL1-217ENST00000476367 TCTE3Q8IZS6 198 aa10.92□□□□□ -0.66
CCNL1-217ENST00000476367 OR5C1Q8NGR4 320 aa10.92□□□□□ -0.66
CCNL1-217ENST00000476367 TMEM190Q8WZ59 177 aa10.92□□□□□ -0.66
CCNL1-217ENST00000476367 GGACTQ9BVM4 153 aa10.92□□□□□ -0.66
CCNL1-217ENST00000476367 SELENOKQ9Y6D0 94 aa10.92□□□□□ -0.66
CCNL1-217ENST00000476367 NDUFA4O00483 81 aa10.91□□□□□ -0.66
CCNL1-217ENST00000476367 ZNF207O43670 478 aaKnown RBP10.91□□□□□ -0.66
CCNL1-217ENST00000476367 YIF1AO95070 293 aa10.91□□□□□ -0.66
CCNL1-217ENST00000476367 S100A11P31949 105 aa10.91□□□□□ -0.66
CCNL1-217ENST00000476367 BAXQ07812 192 aa10.91□□□□□ -0.66
CCNL1-217ENST00000476367 TOMM20LQ6UXN7 152 aa10.91□□□□□ -0.66
CCNL1-217ENST00000476367 ZNF546Q86UE3 836 aa10.91□□□□□ -0.66
CCNL1-217ENST00000476367 STX12Q86Y82 276 aa10.91□□□□□ -0.66
CCNL1-217ENST00000476367 DYNLRB2Q8TF09 96 aa10.91□□□□□ -0.66
CCNL1-217ENST00000476367 SLC35E1Q96K37 410 aa10.91□□□□□ -0.66
CCNL1-217ENST00000476367 SLC25A31Q9H0C2 315 aa10.91□□□□□ -0.66
CCNL1-217ENST00000476367 AURKAIP1Q9NWT8 199 aaPredicted RBP10.91□□□□□ -0.66
CCNL1-217ENST00000476367 SORL1Q92673 2214 aa10.91□□□□□ -0.66
CCNL1-217ENST00000476367 FXYD6-FXYD2A0A087WZ82 144 aa10.91□□□□□ -0.66
CCNL1-217ENST00000476367 PFDN1O60925 122 aa10.91□□□□□ -0.66
CCNL1-217ENST00000476367 SCAF4O95104 1147 aaKnown RBP10.91□□□□□ -0.66
CCNL1-217ENST00000476367 PSG1P11464 419 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms