RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 NSD1Q96L73 2696 aaPredicted RBP14.28□□□□□ -0.12
ATG4B-217ENST00000475693 NIPBLQ6KC79 2804 aaeCLIP14.28□□□□□ -0.12
ATG4B-217ENST00000475693 IGHV3-21A0A0B4J1V1 117 aa14.27□□□□□ -0.12
ATG4B-217ENST00000475693 A0A1B0GV50 99 aa14.27□□□□□ -0.12
ATG4B-217ENST00000475693 HAGHQ16775 308 aa14.27□□□□□ -0.12
ATG4B-217ENST00000475693 ASPHD1Q5U4P2 390 aa14.27□□□□□ -0.12
ATG4B-217ENST00000475693 CYB561D1Q8N8Q1 229 aa14.27□□□□□ -0.12
ATG4B-217ENST00000475693 CIB3Q96Q77 187 aaPredicted RBP14.27□□□□□ -0.12
ATG4B-217ENST00000475693 RNASE2P10153 161 aaKnown RBP14.27□□□□□ -0.13
ATG4B-217ENST00000475693 STX12Q86Y82 276 aa14.27□□□□□ -0.13
ATG4B-217ENST00000475693 ARPC1AQ92747 370 aa14.27□□□□□ -0.13
ATG4B-217ENST00000475693 P2RX4Q99571 388 aa14.27□□□□□ -0.13
ATG4B-217ENST00000475693 TEP1Q99973 2627 aaKnown RBP14.27□□□□□ -0.13
ATG4B-217ENST00000475693 LOC102723971A0A1B0GUV8 181 aa14.26□□□□□ -0.13
ATG4B-217ENST00000475693 IFITM10A6NMD0 228 aa14.26□□□□□ -0.13
ATG4B-217ENST00000475693 G3V318 75 aa14.26□□□□□ -0.13
ATG4B-217ENST00000475693 NPY1RP25929 384 aa14.26□□□□□ -0.13
ATG4B-217ENST00000475693 RND2P52198 227 aa14.26□□□□□ -0.13
ATG4B-217ENST00000475693 OR5T1Q8NG75 326 aa14.26□□□□□ -0.13
ATG4B-217ENST00000475693 FN1P02751 2386 aaKnown RBP14.26□□□□□ -0.13
ATG4B-217ENST00000475693 ATP6V0E1O15342 81 aa14.26□□□□□ -0.13
ATG4B-217ENST00000475693 TMEM95Q3KNT9 176 aa14.26□□□□□ -0.13
ATG4B-217ENST00000475693 PYY3Q5JQD4 70 aa14.26□□□□□ -0.13
ATG4B-217ENST00000475693 INAFM1C9JVW0 142 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 YIF1AO95070 293 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 HLA-DRB1P01911 266 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 ERHP84090 104 aaKnown RBP14.25□□□□□ -0.13
ATG4B-217ENST00000475693 PMS2P11Q13670 270 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 ZNF674Q2M3X9 581 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 LILRB2Q8N423 598 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 PINX1Q96BK5 328 aaKnown RBP14.25□□□□□ -0.13
ATG4B-217ENST00000475693 PSMG3Q9BT73 122 aaPredicted RBP14.25□□□□□ -0.13
ATG4B-217ENST00000475693 ZNF727A8MUV8 499 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 HIST1H2BKO60814 126 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 IFNA5P01569 189 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 HIST1H2BJP06899 126 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 CXCL1P09341 107 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 HIST1H2BOP23527 126 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 HIST1H2BBP33778 126 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 HIST1H2BDP58876 126 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 HIST1H2BCP62807 126 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 SLC38A11Q08AI6 406 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 HIST2H2BEQ16778 126 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 ECSCRQ19T08 205 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.25□□□□□ -0.13
ATG4B-217ENST00000475693 MBD3L1Q8WWY6 194 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 HIST1H2BHQ93079 126 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 NOL4LQ96MY1 436 aaPredicted RBP14.25□□□□□ -0.13
ATG4B-217ENST00000475693 HIST1H2BNQ99877 126 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 HIST1H2BMQ99879 126 aa14.25□□□□□ -0.13
ATG4B-217ENST00000475693 NDUFA6P56556 154 aa14.24□□□□□ -0.13
ATG4B-217ENST00000475693 A0A1W2PN81 502 aa14.23□□□□□ -0.13
ATG4B-217ENST00000475693 PRSS46E5RG02 174 aa14.23□□□□□ -0.13
ATG4B-217ENST00000475693 CHRNA7P36544 502 aa14.23□□□□□ -0.13
ATG4B-217ENST00000475693 RUNX1Q01196 453 aa14.23□□□□□ -0.13
ATG4B-217ENST00000475693 BSXQ3C1V8 233 aa14.23□□□□□ -0.13
ATG4B-217ENST00000475693 WNT10AQ9GZT5 417 aa14.23□□□□□ -0.13
ATG4B-217ENST00000475693 ESM1Q9NQ30 184 aa14.23□□□□□ -0.13
ATG4B-217ENST00000475693 S4R3C0 116 aa14.23□□□□□ -0.13
ATG4B-217ENST00000475693 PPP1R2P9O14990 202 aa14.23□□□□□ -0.13
ATG4B-217ENST00000475693 OR10P1Q8NGE3 313 aa14.23□□□□□ -0.13
ATG4B-217ENST00000475693 RCC1LQ96I51 464 aaKnown RBP14.23□□□□□ -0.13
ATG4B-217ENST00000475693 PARD6GQ9BYG4 376 aaPredicted RBP14.23□□□□□ -0.13
ATG4B-217ENST00000475693 SETD2Q9BYW2 2564 aaPredicted RBP14.23□□□□□ -0.13
ATG4B-217ENST00000475693 HIST1H1BP16401 226 aaKnown RBP14.22□□□□□ -0.13
ATG4B-217ENST00000475693 SERF2P84101 59 aa14.22□□□□□ -0.13
ATG4B-217ENST00000475693 FAM90A2PQ658T7 463 aa14.22□□□□□ -0.13
ATG4B-217ENST00000475693 ZNF343Q6P1L6 599 aa14.22□□□□□ -0.13
ATG4B-217ENST00000475693 MISP3Q96FF7 219 aa14.22□□□□□ -0.13
ATG4B-217ENST00000475693 MRPL36Q9P0J6 103 aaKnown RBP14.22□□□□□ -0.13
ATG4B-217ENST00000475693 PITPNC1Q9UKF7 332 aa14.22□□□□□ -0.13
ATG4B-217ENST00000475693 VPREB3Q9UKI3 123 aa14.22□□□□□ -0.13
ATG4B-217ENST00000475693 TRBV24-1A0A075B6N3 115 aa14.22□□□□□ -0.13
ATG4B-217ENST00000475693 UBE2L5PA0A1B0GUS4 154 aa14.22□□□□□ -0.13
ATG4B-217ENST00000475693 SMCO3A2RU48 225 aa14.22□□□□□ -0.13
ATG4B-217ENST00000475693 CLDN34H7C241 214 aa14.22□□□□□ -0.13
ATG4B-217ENST00000475693 NDUFS6O75380 124 aaKnown RBP14.22□□□□□ -0.13
ATG4B-217ENST00000475693 BCL2P10415 239 aa14.22□□□□□ -0.13
ATG4B-217ENST00000475693 SRSF2Q01130 221 aaKnown RBP14.22□□□□□ -0.13
ATG4B-217ENST00000475693 HIST3H2BBQ8N257 126 aa14.22□□□□□ -0.13
ATG4B-217ENST00000475693 OR2T6Q8NHC8 308 aa14.22□□□□□ -0.13
ATG4B-217ENST00000475693 CTDSP1Q9GZU7 261 aa14.22□□□□□ -0.13
ATG4B-217ENST00000475693 PRDM13Q9H4Q3 707 aa14.22□□□□□ -0.13
ATG4B-217ENST00000475693 FNDC4Q9H6D8 234 aaPredicted RBP14.22□□□□□ -0.13
ATG4B-217ENST00000475693 C2orf83Q53S99 150 aa14.21□□□□□ -0.13
ATG4B-217ENST00000475693 ARSJQ5FYB0 599 aaPredicted RBP14.21□□□□□ -0.13
ATG4B-217ENST00000475693 SLC25A24Q6NUK1 477 aa14.21□□□□□ -0.13
ATG4B-217ENST00000475693 MAST4O15021 2626 aa14.21□□□□□ -0.13
ATG4B-217ENST00000475693 CYB5BO43169 146 aa14.21□□□□□ -0.14
ATG4B-217ENST00000475693 UNQ5815/PRO19632Q6UWF5 114 aa14.21□□□□□ -0.14
ATG4B-217ENST00000475693 FAM210BQ96KR6 192 aa14.21□□□□□ -0.14
ATG4B-217ENST00000475693 TGIF2-C20orf24A0A0A6YYL0 155 aa14.2□□□□□ -0.14
ATG4B-217ENST00000475693 DEFA4P12838 97 aa14.2□□□□□ -0.14
ATG4B-217ENST00000475693 HNF1AP20823 631 aa14.2□□□□□ -0.14
ATG4B-217ENST00000475693 CEBPGP53567 150 aa14.2□□□□□ -0.14
ATG4B-217ENST00000475693 RAB11AP62491 216 aa14.2□□□□□ -0.14
ATG4B-217ENST00000475693 RPP30P78346 268 aaKnown RBP14.2□□□□□ -0.14
ATG4B-217ENST00000475693 PFDN5Q99471 154 aa14.2□□□□□ -0.14
ATG4B-217ENST00000475693 INS-IGF2F8WCM5 200 aa14.19□□□□□ -0.14
ATG4B-217ENST00000475693 SOX15O60248 233 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms