RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 ZNF705FA8MVS1 300 aaPredicted RBP8.98□□□□□ -0.97
SKA3-206ENST00000475251 FAM90A26D6RGX4 464 aa8.98□□□□□ -0.97
SKA3-206ENST00000475251 ZNF705DP0CH99 300 aaPredicted RBP8.98□□□□□ -0.97
SKA3-206ENST00000475251 ZNF705BP0CI00 300 aaPredicted RBP8.98□□□□□ -0.97
SKA3-206ENST00000475251 RNASE2P10153 161 aaKnown RBP8.98□□□□□ -0.97
SKA3-206ENST00000475251 HLA-DRB4P13762 266 aa8.98□□□□□ -0.97
SKA3-206ENST00000475251 PRSS3P35030 304 aa8.98□□□□□ -0.97
SKA3-206ENST00000475251 UCP3P55916 312 aa8.98□□□□□ -0.97
SKA3-206ENST00000475251 UBE2NLQ5JXB2 153 aa8.98□□□□□ -0.97
SKA3-206ENST00000475251 IZUMO2Q6UXV1 221 aa8.98□□□□□ -0.97
SKA3-206ENST00000475251 OR1S2Q8NGQ3 325 aa8.98□□□□□ -0.97
SKA3-206ENST00000475251 GLMPQ8WWB7 406 aa8.98□□□□□ -0.97
SKA3-206ENST00000475251 DKK2Q9UBU2 259 aa8.98□□□□□ -0.97
SKA3-206ENST00000475251 HLA-DRB4X5D2U9 266 aa8.98□□□□□ -0.97
SKA3-206ENST00000475251 HSPG2P98160 4391 aa8.97□□□□□ -0.97
SKA3-206ENST00000475251 LOC100506127A0A0U1RQW1 187 aa8.97□□□□□ -0.97
SKA3-206ENST00000475251 IGKV1-17P01599 117 aa8.97□□□□□ -0.97
SKA3-206ENST00000475251 HLA-DMAP28067 261 aa8.97□□□□□ -0.97
SKA3-206ENST00000475251 NKX2-1P43699 371 aaPredicted RBP8.97□□□□□ -0.97
SKA3-206ENST00000475251 TIGITQ495A1 244 aa8.97□□□□□ -0.97
SKA3-206ENST00000475251 FAM222AQ5U5X8 452 aa8.97□□□□□ -0.97
SKA3-206ENST00000475251 SIGLEC15Q6ZMC9 328 aa8.97□□□□□ -0.97
SKA3-206ENST00000475251 C15orf53Q8NAA6 179 aa8.97□□□□□ -0.97
SKA3-206ENST00000475251 FNDC4Q9H6D8 234 aaPredicted RBP8.97□□□□□ -0.97
SKA3-206ENST00000475251 RAB26Q9ULW5 256 aa8.97□□□□□ -0.97
SKA3-206ENST00000475251 IGHV3OR16-12A0A075B7B8 117 aa8.96□□□□□ -0.98
SKA3-206ENST00000475251 SLC25A4P12235 298 aa8.96□□□□□ -0.98
SKA3-206ENST00000475251 HTN3P15516 51 aa8.96□□□□□ -0.98
SKA3-206ENST00000475251 NUP62P37198 522 aaPredicted RBP8.96□□□□□ -0.98
SKA3-206ENST00000475251 YPEL3P61236 119 aaPredicted RBP8.96□□□□□ -0.98
SKA3-206ENST00000475251 LYSMD2Q8IV50 215 aa8.96□□□□□ -0.98
SKA3-206ENST00000475251 ZNF486Q96H40 463 aaPredicted RBP8.96□□□□□ -0.98
SKA3-206ENST00000475251 MRPL36Q9P0J6 103 aaKnown RBP8.96□□□□□ -0.98
SKA3-206ENST00000475251 PFDN2Q9UHV9 154 aa8.96□□□□□ -0.98
SKA3-206ENST00000475251 A0A0B4J293 547 aa8.95□□□□□ -0.98
SKA3-206ENST00000475251 A6NJY4 79 aa8.95□□□□□ -0.98
SKA3-206ENST00000475251 HBE1P02100 147 aa8.95□□□□□ -0.98
SKA3-206ENST00000475251 IGLC1P0CG04 106 aa8.95□□□□□ -0.98
SKA3-206ENST00000475251 ETV6P41212 452 aa8.95□□□□□ -0.98
SKA3-206ENST00000475251 HTR2BP41595 481 aa8.95□□□□□ -0.98
SKA3-206ENST00000475251 RND3P61587 244 aa8.95□□□□□ -0.98
SKA3-206ENST00000475251 ETFRF1Q6IPR1 90 aa8.95□□□□□ -0.98
SKA3-206ENST00000475251 RRNAD1Q96FB5 475 aaKnown RBP8.95□□□□□ -0.98
SKA3-206ENST00000475251 ATG101Q9BSB4 218 aa8.95□□□□□ -0.98
SKA3-206ENST00000475251 GOLT1BQ9Y3E0 138 aa8.95□□□□□ -0.98
SKA3-206ENST00000475251 BUB3O43684 328 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 IGKV1-5P01602 117 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 IL4P05112 153 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 P0C879 139 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 PGAM2P15259 253 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 OR10J1P30954 320 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 RCVRNP35243 200 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 ID1P41134 155 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 DHODHQ02127 395 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 MLANAQ16655 118 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 IZUMO4Q1ZYL8 232 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 BSXQ3C1V8 233 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 SPATA31B1PQ5VZV4 182 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 TMEM88Q6PEY1 159 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 GSG1LQ6UXU4 331 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 FOXI2Q6ZQN5 318 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 Q8N1X5 172 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 SAMD12Q8N8I0 201 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 RNASE11Q8TAA1 199 aaKnown RBP8.94□□□□□ -0.98
SKA3-206ENST00000475251 RNASEH2CQ8TDP1 164 aaKnown RBP8.94□□□□□ -0.98
SKA3-206ENST00000475251 CLUHP3Q96NS8 147 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 C7orf50Q9BRJ6 194 aaKnown RBP8.94□□□□□ -0.98
SKA3-206ENST00000475251 SCPEP1Q9HB40 452 aa8.94□□□□□ -0.98
SKA3-206ENST00000475251 SMIM31A0A1B0GVY4 71 aa8.93□□□□□ -0.98
SKA3-206ENST00000475251 ALDH3B2P48448 385 aa8.93□□□□□ -0.98
SKA3-206ENST00000475251 RND2P52198 227 aa8.93□□□□□ -0.98
SKA3-206ENST00000475251 SPCS3P61009 180 aa8.93□□□□□ -0.98
SKA3-206ENST00000475251 DAD1P61803 113 aa8.93□□□□□ -0.98
SKA3-206ENST00000475251 TNP2Q05952 138 aa8.93□□□□□ -0.98
SKA3-206ENST00000475251 TRIM16LQ309B1 348 aa8.93□□□□□ -0.98
SKA3-206ENST00000475251 C6orf223Q8N319 242 aa8.93□□□□□ -0.98
SKA3-206ENST00000475251 GPX8Q8TED1 209 aa8.93□□□□□ -0.98
SKA3-206ENST00000475251 YTHDF1Q9BYJ9 559 aaKnown RBP8.93□□□□□ -0.98
SKA3-206ENST00000475251 SAV1Q9H4B6 383 aaPredicted RBP8.93□□□□□ -0.98
SKA3-206ENST00000475251 YTHDF2Q9Y5A9 579 aaKnown RBP8.93□□□□□ -0.98
SKA3-206ENST00000475251 NBDYA0A0U1RRE5 68 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 C3orf85A0A1B0GTC6 90 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 LOC102723971A0A1B0GUV8 181 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 B3GALNT1O75752 331 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 TOMM40O96008 361 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 IGKV3-20P01619 116 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 RD3LP0DJH9 198 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 PSMB3P49720 205 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 PIGPP57054 158 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 USF2Q15853 346 aaPredicted RBP8.92□□□□□ -0.98
SKA3-206ENST00000475251 RRN3P1Q2M238 152 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 C2orf83Q53S99 150 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 PRSS54Q6PEW0 395 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 NOXA1Q86UR1 476 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 FAM219AQ8IW50 185 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 CCDC71LQ8N9Z2 235 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 OR52E5Q8NH55 327 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 COQ8AQ8NI60 647 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 TP53RKQ96S44 253 aa8.92□□□□□ -0.98
SKA3-206ENST00000475251 HEYLQ9NQ87 328 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms