RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 NPIPB3Q92617 1050 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 DPF1Q92782 380 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 RCC1LQ96I51 464 aaKnown RBP5.31□□□□□ -1.56
LIMD1-204ENST00000474665 TXN2Q99757 166 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 ZNF436Q9C0F3 470 aaPredicted RBP5.31□□□□□ -1.56
LIMD1-204ENST00000474665 MED28Q9H204 178 aa5.31□□□□□ -1.56
LIMD1-204ENST00000474665 STRAPQ9Y3F4 350 aaKnown RBP5.31□□□□□ -1.56
LIMD1-204ENST00000474665 AGRNO00468 2067 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 DNAH9Q9NYC9 4486 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 IGHV3OR16-8A0A075B7F1 116 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 CORTO00230 105 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 OVOL1O14753 267 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 CYB5BO43169 146 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 CLN5O75503 358 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 MPC2O95563 127 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 LY86O95711 162 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 SLC25A4P12235 298 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 GPX4P36969 197 aaPredicted RBP5.3□□□□□ -1.56
LIMD1-204ENST00000474665 KRTAP10-11P60412 298 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 S100A10P60903 97 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 RPEL1Q2QD12 228 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 TIGITQ495A1 244 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 LRRC37A5PQ49AS3 106 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 TM4SF20Q53R12 229 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 Q56UQ5 140 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 FAM209BQ5JX69 171 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 ACSM6Q6P461 480 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 SPSB3Q6PJ21 355 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 TMEM182Q6ZP80 229 aaPredicted RBP5.3□□□□□ -1.56
LIMD1-204ENST00000474665 ACOT7LQ6ZUV0 252 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 TMEM252Q8N6L7 170 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 UBAC2Q8NBM4 344 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 OR9G4Q8NGQ1 327 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 CACNG8Q8WXS5 425 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 TMEM190Q8WZ59 177 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 ACY3Q96HD9 319 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 ZFAND3Q9H8U3 227 aa5.3□□□□□ -1.56
LIMD1-204ENST00000474665 LYRM2Q9NU23 88 aaPredicted RBP5.3□□□□□ -1.56
LIMD1-204ENST00000474665 A0A1B0GVG6 124 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 C2orf70A6NJV1 201 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 A8MWP6 167 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 SEC14L6B5MCN3 397 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 LGALS9O00182 355 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 CST7O76096 145 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 GIPP09681 153 aaPredicted RBP5.29□□□□□ -1.56
LIMD1-204ENST00000474665 C8orf88P0DMB2 117 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 LYL1P12980 280 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 CD33P20138 364 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 NPBWR1P48145 328 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 RAB11AP62491 216 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 CYCSP99999 105 aaKnown RBP5.29□□□□□ -1.56
LIMD1-204ENST00000474665 ZNF90Q03938 601 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 OR8G2PQ6IF36 304 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 TOMM20LQ6UXN7 152 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 NOXA1Q86UR1 476 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 STPG3Q8N7X2 389 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 THAP8Q8NA92 274 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 MBD2Q9UBB5 411 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 PAIP2BQ9ULR5 123 aaKnown RBP5.29□□□□□ -1.56
LIMD1-204ENST00000474665 LSM4Q9Y4Z0 139 aaKnown RBP5.29□□□□□ -1.56
LIMD1-204ENST00000474665 SELENOKQ9Y6D0 94 aa5.29□□□□□ -1.56
LIMD1-204ENST00000474665 RPS10-NUDT3A0A1W2PQS6 291 aa5.28□□□□□ -1.56
LIMD1-204ENST00000474665 IZUMO1RA6ND01 250 aa5.28□□□□□ -1.56
LIMD1-204ENST00000474665 NDUFA4O00483 81 aa5.28□□□□□ -1.56
LIMD1-204ENST00000474665 NUPL2O15504 423 aaKnown RBP5.28□□□□□ -1.56
LIMD1-204ENST00000474665 ZNF207O43670 478 aaKnown RBP5.28□□□□□ -1.56
LIMD1-204ENST00000474665 GNG7O60262 68 aa5.28□□□□□ -1.56
LIMD1-204ENST00000474665 SCAF4O95104 1147 aaKnown RBP5.28□□□□□ -1.56
LIMD1-204ENST00000474665 APOHP02749 345 aaPredicted RBP5.28□□□□□ -1.56
LIMD1-204ENST00000474665 OR10J1P30954 320 aa5.28□□□□□ -1.56
LIMD1-204ENST00000474665 CAV2P51636 162 aa5.28□□□□□ -1.56
LIMD1-204ENST00000474665 YPEL3P61236 119 aaPredicted RBP5.28□□□□□ -1.56
LIMD1-204ENST00000474665 DLK1P80370 383 aa5.28□□□□□ -1.56
LIMD1-204ENST00000474665 NHLH2Q02577 135 aa5.28□□□□□ -1.56
LIMD1-204ENST00000474665 EGFEM1PQ0D2K5 195 aa5.28□□□□□ -1.56
LIMD1-204ENST00000474665 ETFRF1Q6IPR1 90 aa5.28□□□□□ -1.56
LIMD1-204ENST00000474665 LILRB2Q8N423 598 aa5.28□□□□□ -1.56
LIMD1-204ENST00000474665 TMEM217Q8N7C4 229 aa5.28□□□□□ -1.56
LIMD1-204ENST00000474665 SIGLEC8Q9NYZ4 499 aa5.28□□□□□ -1.56
LIMD1-204ENST00000474665 PUS1Q9Y606 427 aaKnown RBP eCLIP5.28□□□□□ -1.56
LIMD1-204ENST00000474665 ZNF320A2RRD8 509 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 E5RGE8 158 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 SMLR1H3BR10 107 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 K7EMT4 169 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 L7N2F9 121 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 IGLV1-51P01701 117 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 PSG1P11464 419 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 FOLR2P14207 255 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 CBLN1P23435 193 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 GATA2P23769 480 aaPredicted RBP5.27□□□□□ -1.57
LIMD1-204ENST00000474665 P2RY1P47900 373 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 SULT1A1P50225 295 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 BCAP31P51572 246 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 RAP2BP61225 183 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 VAMP2P63027 116 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 RPP30P78346 268 aaKnown RBP5.27□□□□□ -1.57
LIMD1-204ENST00000474665 EWSR1Q01844 656 aaKnown RBP eCLIP5.27□□□□□ -1.57
LIMD1-204ENST00000474665 SLC38A11Q08AI6 406 aa5.27□□□□□ -1.57
LIMD1-204ENST00000474665 USF2Q15853 346 aaPredicted RBP5.27□□□□□ -1.57
LIMD1-204ENST00000474665 VWC2Q2TAL6 325 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms