RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 SCAF4O95104 1147 aaKnown RBP7.71□□□□□ -1.18
COL8A1-206ENST00000474648 LGALS1P09382 135 aaKnown RBP7.71□□□□□ -1.18
COL8A1-206ENST00000474648 NPBWR1P48145 328 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 EIF2B2P49770 351 aaKnown RBP7.71□□□□□ -1.18
COL8A1-206ENST00000474648 AP2S1P53680 142 aaPredicted RBP7.71□□□□□ -1.18
COL8A1-206ENST00000474648 HBG1P69891 147 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 HBG2P69892 147 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 OR2F1Q13607 317 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 CLINT1Q14677 625 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 ZFP69Q49AA0 526 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 TMEM144Q7Z5S9 345 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 NDUFA11Q86Y39 141 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 KCNRGQ8N5I3 272 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 THAP8Q8NA92 274 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 C4orf3Q8WVX3 66 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 ACY3Q96HD9 319 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 SLC35E1Q96K37 410 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 CHRDL1Q9BU40 450 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 SMIM3Q9BZL3 60 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 NPVFQ9HCQ7 196 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 ZC4H2Q9NQZ6 224 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 CYTL1Q9NRR1 136 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 PEF1Q9UBV8 284 aaKnown RBP7.71□□□□□ -1.18
COL8A1-206ENST00000474648 FBXL17Q9UF56 701 aa7.71□□□□□ -1.18
COL8A1-206ENST00000474648 LSM4Q9Y4Z0 139 aaKnown RBP7.71□□□□□ -1.18
COL8A1-206ENST00000474648 ANK2Q01484 3957 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 A0A0D9SG52 128 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 A0A1W2PRX2 142 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 OR2T8A6NH00 312 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 PPP5D1E7EU14 171 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 BMPR1BO00238 502 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 IGKV1-17P01599 117 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 IGLC1P0CG04 106 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 GPR183P32249 361 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 NKX2-5P52952 324 aaPredicted RBP7.7□□□□□ -1.18
COL8A1-206ENST00000474648 ZNF345Q14585 488 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 TIGITQ495A1 244 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 Q56UQ5 140 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 TMUB2Q71RG4 321 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 C9orf62Q8N4C0 152 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 ATP5SQ99766 215 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 TMEM147Q9BVK8 224 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 UQCC1Q9NVA1 299 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 WDR83OSQ9Y284 106 aa7.7□□□□□ -1.18
COL8A1-206ENST00000474648 IGHV4OR15-8A0A075B7B6 117 aa7.69□□□□□ -1.18
COL8A1-206ENST00000474648 A0A087WW49 117 aa7.69□□□□□ -1.18
COL8A1-206ENST00000474648 SMCO3A2RU48 225 aa7.69□□□□□ -1.18
COL8A1-206ENST00000474648 TGOLN2O43493 480 aa7.69□□□□□ -1.18
COL8A1-206ENST00000474648 GNG7O60262 68 aa7.69□□□□□ -1.18
COL8A1-206ENST00000474648 HSPB1P04792 205 aaKnown RBP7.69□□□□□ -1.18
COL8A1-206ENST00000474648 OR10J1P30954 320 aa7.69□□□□□ -1.18
COL8A1-206ENST00000474648 DEFB136Q30KP8 78 aa7.69□□□□□ -1.18
COL8A1-206ENST00000474648 NSUN5P1Q3KNT7 163 aa7.69□□□□□ -1.18
COL8A1-206ENST00000474648 KHDC1LQ5JSQ8 128 aa7.69□□□□□ -1.18
COL8A1-206ENST00000474648 C12orf54Q6X4T0 127 aa7.69□□□□□ -1.18
COL8A1-206ENST00000474648 TMEM182Q6ZP80 229 aaPredicted RBP7.69□□□□□ -1.18
COL8A1-206ENST00000474648 LILRB2Q8N423 598 aa7.69□□□□□ -1.18
COL8A1-206ENST00000474648 UBAC2Q8NBM4 344 aa7.69□□□□□ -1.18
COL8A1-206ENST00000474648 KLHL30-AS1Q8NEE0 82 aa7.69□□□□□ -1.18
COL8A1-206ENST00000474648 OR1N2Q8NGR9 330 aa7.69□□□□□ -1.18
COL8A1-206ENST00000474648 RAX2Q96IS3 184 aa7.69□□□□□ -1.18
COL8A1-206ENST00000474648 GAR1Q9NY12 217 aaKnown RBP7.69□□□□□ -1.18
COL8A1-206ENST00000474648 TRAV30A0A087WSZ9 112 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 NUDT19A8MXV4 375 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 BOLA2-SMG1P6H3BVE0 249 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 TAAR5O14804 337 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 GGCTO75223 188 aaKnown RBP7.68□□□□□ -1.18
COL8A1-206ENST00000474648 DFFBO76075 338 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 OR2C1O95371 312 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 ARL3P36405 182 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 ZNF90Q03938 601 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 AKR1C1Q04828 323 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 FAM209BQ5JX69 171 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 RPL7L1Q6DKI1 246 aaKnown RBP7.68□□□□□ -1.18
COL8A1-206ENST00000474648 SPSB3Q6PJ21 355 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 BTNL8Q6UX41 500 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 C3orf56Q8N813 242 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 OR11H1Q8NG94 326 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 DUX3Q96PT4 197 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 TRGV9Q99603 122 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 MGST2Q99735 147 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 PARD6GQ9BYG4 376 aaPredicted RBP7.68□□□□□ -1.18
COL8A1-206ENST00000474648 WDR61Q9GZS3 305 aaKnown RBP7.68□□□□□ -1.18
COL8A1-206ENST00000474648 SLC45A2Q9UMX9 530 aa7.68□□□□□ -1.18
COL8A1-206ENST00000474648 UBE2L5PA0A1B0GUS4 154 aa7.67□□□□□ -1.18
COL8A1-206ENST00000474648 ZFP92A6NM28 416 aa7.67□□□□□ -1.18
COL8A1-206ENST00000474648 LINC01619G3V211 115 aa7.67□□□□□ -1.18
COL8A1-206ENST00000474648 CCL24O00175 119 aa7.67□□□□□ -1.18
COL8A1-206ENST00000474648 NUPL2O15504 423 aaKnown RBP7.67□□□□□ -1.18
COL8A1-206ENST00000474648 LINC00869P0C866 280 aa7.67□□□□□ -1.18
COL8A1-206ENST00000474648 PSG1P11464 419 aa7.67□□□□□ -1.18
COL8A1-206ENST00000474648 GATA2P23769 480 aaPredicted RBP7.67□□□□□ -1.18
COL8A1-206ENST00000474648 YPEL3P61236 119 aaPredicted RBP7.67□□□□□ -1.18
COL8A1-206ENST00000474648 FHL3Q13643 280 aa7.67□□□□□ -1.18
COL8A1-206ENST00000474648 KLF5Q13887 457 aaPredicted RBP7.67□□□□□ -1.18
COL8A1-206ENST00000474648 TEPPQ6URK8 271 aa7.67□□□□□ -1.18
COL8A1-206ENST00000474648 SHISA2Q6UWI4 295 aa7.67□□□□□ -1.18
COL8A1-206ENST00000474648 GPHB5Q86YW7 130 aa7.67□□□□□ -1.18
COL8A1-206ENST00000474648 ARPC5LQ9BPX5 153 aa7.67□□□□□ -1.18
COL8A1-206ENST00000474648 ARL6Q9H0F7 186 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms