RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 GPR146Q96CH1 333 aa14.96□□□□□ -0.01
PDLIM4-206ENST00000474421 RABAC1Q9UI14 185 aa14.96□□□□□ -0.01
PDLIM4-206ENST00000474421 ANKRD20A5PA0PJZ0 165 aa14.95□□□□□ -0.02
PDLIM4-206ENST00000474421 EIF2B2P49770 351 aaKnown RBP14.95□□□□□ -0.02
PDLIM4-206ENST00000474421 TIGITQ495A1 244 aa14.95□□□□□ -0.02
PDLIM4-206ENST00000474421 ETFRF1Q6IPR1 90 aa14.95□□□□□ -0.02
PDLIM4-206ENST00000474421 SLC24A4Q8NFF2 622 aa14.95□□□□□ -0.02
PDLIM4-206ENST00000474421 CA1P00915 261 aaPredicted RBP14.94□□□□□ -0.02
PDLIM4-206ENST00000474421 SULT1A3P0DMM9 295 aa14.94□□□□□ -0.02
PDLIM4-206ENST00000474421 SULT1A4P0DMN0 295 aa14.94□□□□□ -0.02
PDLIM4-206ENST00000474421 P2RY1P47900 373 aa14.94□□□□□ -0.02
PDLIM4-206ENST00000474421 STHQ8IWL8 128 aa14.94□□□□□ -0.02
PDLIM4-206ENST00000474421 OR11H2Q8NH07 326 aa14.94□□□□□ -0.02
PDLIM4-206ENST00000474421 Q8WTZ3 238 aa14.94□□□□□ -0.02
PDLIM4-206ENST00000474421 LY6G6CO95867 125 aa14.93□□□□□ -0.02
PDLIM4-206ENST00000474421 YPEL3P61236 119 aaPredicted RBP14.93□□□□□ -0.02
PDLIM4-206ENST00000474421 TMEM187Q14656 261 aa14.93□□□□□ -0.02
PDLIM4-206ENST00000474421 LEMD1Q68G75 181 aa14.93□□□□□ -0.02
PDLIM4-206ENST00000474421 PRSS54Q6PEW0 395 aa14.93□□□□□ -0.02
PDLIM4-206ENST00000474421 STXBP6Q8NFX7 210 aa14.93□□□□□ -0.02
PDLIM4-206ENST00000474421 MFFQ9GZY8 342 aa14.93□□□□□ -0.02
PDLIM4-206ENST00000474421 C11orf68Q9H3H3 251 aaKnown RBP14.93□□□□□ -0.02
PDLIM4-206ENST00000474421 PIGBOS1A0A0B4J2F0 54 aa14.92□□□□□ -0.02
PDLIM4-206ENST00000474421 HELTA6NFD8 242 aa14.92□□□□□ -0.02
PDLIM4-206ENST00000474421 K7EQG2 157 aa14.92□□□□□ -0.02
PDLIM4-206ENST00000474421 IGLC1P0CG04 106 aa14.92□□□□□ -0.02
PDLIM4-206ENST00000474421 NPY1RP25929 384 aa14.92□□□□□ -0.02
PDLIM4-206ENST00000474421 OR10J1P30954 320 aa14.92□□□□□ -0.02
PDLIM4-206ENST00000474421 RND2P52198 227 aa14.92□□□□□ -0.02
PDLIM4-206ENST00000474421 TMEM41BQ5BJD5 291 aa14.92□□□□□ -0.02
PDLIM4-206ENST00000474421 PHLDA1Q8WV24 401 aaPredicted RBP14.92□□□□□ -0.02
PDLIM4-206ENST00000474421 MCUBQ9NWR8 336 aa14.92□□□□□ -0.02
PDLIM4-206ENST00000474421 FABP12A6NFH5 140 aa14.91□□□□□ -0.02
PDLIM4-206ENST00000474421 HNRNPCP07910 306 aaKnown RBP eCLIP14.91□□□□□ -0.02
PDLIM4-206ENST00000474421 ANXA3P12429 323 aa14.91□□□□□ -0.02
PDLIM4-206ENST00000474421 CCR6P51684 374 aa14.91□□□□□ -0.02
PDLIM4-206ENST00000474421 AP2S1P53680 142 aaPredicted RBP14.91□□□□□ -0.02
PDLIM4-206ENST00000474421 SRPXP78539 464 aa14.91□□□□□ -0.02
PDLIM4-206ENST00000474421 NMSQ5H8A3 153 aa14.91□□□□□ -0.02
PDLIM4-206ENST00000474421 FAM24BQ8N5W8 94 aa14.91□□□□□ -0.02
PDLIM4-206ENST00000474421 SLIRPQ9GZT3 109 aaKnown RBP14.91□□□□□ -0.02
PDLIM4-206ENST00000474421 U3KQE9 123 aa14.91□□□□□ -0.02
PDLIM4-206ENST00000474421 A0A0B4J2A0 478 aa14.9□□□□□ -0.02
PDLIM4-206ENST00000474421 C11orf45Q8TAV5 145 aa14.9□□□□□ -0.02
PDLIM4-206ENST00000474421 SHPKQ9UHJ6 478 aa14.9□□□□□ -0.02
PDLIM4-206ENST00000474421 U3KQ87 197 aa14.9□□□□□ -0.02
PDLIM4-206ENST00000474421 BIRC6Q9NR09 4857 aa14.9□□□□□ -0.02
PDLIM4-206ENST00000474421 IFNA10P01566 189 aa14.89□□□□□ -0.03
PDLIM4-206ENST00000474421 SPP1P10451 314 aa14.89□□□□□ -0.03
PDLIM4-206ENST00000474421 AKR1C4P17516 323 aa14.89□□□□□ -0.03
PDLIM4-206ENST00000474421 TNFSF8P32971 234 aa14.89□□□□□ -0.03
PDLIM4-206ENST00000474421 FAUP35544 74 aaKnown RBP14.89□□□□□ -0.03
PDLIM4-206ENST00000474421 ATP5IP56385 69 aaPredicted RBP14.89□□□□□ -0.03
PDLIM4-206ENST00000474421 SMCO1Q147U7 214 aa14.89□□□□□ -0.03
PDLIM4-206ENST00000474421 RBMS2Q15434 407 aaKnown RBP14.89□□□□□ -0.03
PDLIM4-206ENST00000474421 MORN3Q6PF18 240 aaPredicted RBP14.89□□□□□ -0.03
PDLIM4-206ENST00000474421 LGI3Q8N145 548 aa14.89□□□□□ -0.03
PDLIM4-206ENST00000474421 DCANP1Q8TF63 244 aa14.89□□□□□ -0.03
PDLIM4-206ENST00000474421 SOSTQ9BQB4 213 aa14.89□□□□□ -0.03
PDLIM4-206ENST00000474421 HSPB7Q9UBY9 170 aa14.89□□□□□ -0.03
PDLIM4-206ENST00000474421 AGRNO00468 2067 aa14.88□□□□□ -0.03
PDLIM4-206ENST00000474421 H3BMQ9 156 aa14.88□□□□□ -0.03
PDLIM4-206ENST00000474421 ZNF688P0C7X2 276 aa14.88□□□□□ -0.03
PDLIM4-206ENST00000474421 C16orf54Q6UWD8 224 aa14.88□□□□□ -0.03
PDLIM4-206ENST00000474421 TRPT1Q86TN4 253 aaKnown RBP14.88□□□□□ -0.03
PDLIM4-206ENST00000474421 MCFD2Q8NI22 146 aa14.88□□□□□ -0.03
PDLIM4-206ENST00000474421 TMEM170AQ8WVE7 144 aa14.88□□□□□ -0.03
PDLIM4-206ENST00000474421 NPIPB3Q92617 1050 aa14.88□□□□□ -0.03
PDLIM4-206ENST00000474421 NXPH3O95157 252 aa14.87□□□□□ -0.03
PDLIM4-206ENST00000474421 IFNA4P05014 189 aa14.87□□□□□ -0.03
PDLIM4-206ENST00000474421 IL4P05112 153 aa14.87□□□□□ -0.03
PDLIM4-206ENST00000474421 RD3LP0DJH9 198 aa14.87□□□□□ -0.03
PDLIM4-206ENST00000474421 AP3S2P59780 193 aa14.87□□□□□ -0.03
PDLIM4-206ENST00000474421 DHRS2Q13268 280 aa14.87□□□□□ -0.03
PDLIM4-206ENST00000474421 DTD1Q8TEA8 209 aa14.87□□□□□ -0.03
PDLIM4-206ENST00000474421 GLMPQ8WWB7 406 aa14.87□□□□□ -0.03
PDLIM4-206ENST00000474421 ACY3Q96HD9 319 aa14.87□□□□□ -0.03
PDLIM4-206ENST00000474421 PRR13Q9NZ81 148 aa14.87□□□□□ -0.03
PDLIM4-206ENST00000474421 TOMM40O96008 361 aa14.86□□□□□ -0.03
PDLIM4-206ENST00000474421 SUPT4H1P63272 117 aaKnown RBP14.86□□□□□ -0.03
PDLIM4-206ENST00000474421 LYZL2Q7Z4W2 148 aa14.86□□□□□ -0.03
PDLIM4-206ENST00000474421 SEPSECSQ9HD40 501 aaKnown RBP14.86□□□□□ -0.03
PDLIM4-206ENST00000474421 PFDN2Q9UHV9 154 aa14.86□□□□□ -0.03
PDLIM4-206ENST00000474421 NUP62P37198 522 aaPredicted RBP14.85□□□□□ -0.03
PDLIM4-206ENST00000474421 NANOS2P60321 138 aaKnown RBP14.85□□□□□ -0.03
PDLIM4-206ENST00000474421 SNRPD3P62318 126 aaKnown RBP14.85□□□□□ -0.03
PDLIM4-206ENST00000474421 USF2Q15853 346 aaPredicted RBP14.85□□□□□ -0.03
PDLIM4-206ENST00000474421 RBKSQ9H477 322 aa14.85□□□□□ -0.03
PDLIM4-206ENST00000474421 FBXL17Q9UF56 701 aa14.85□□□□□ -0.03
PDLIM4-206ENST00000474421 DUXBA0A1W2PPF3 345 aa14.84□□□□□ -0.03
PDLIM4-206ENST00000474421 GPX4P36969 197 aaPredicted RBP14.84□□□□□ -0.03
PDLIM4-206ENST00000474421 KLF9Q13886 244 aaPredicted RBP14.84□□□□□ -0.03
PDLIM4-206ENST00000474421 ACTL10Q5JWF8 245 aa14.84□□□□□ -0.03
PDLIM4-206ENST00000474421 OR1S1Q8NH92 325 aa14.84□□□□□ -0.03
PDLIM4-206ENST00000474421 KNCNA6PVL3 124 aa14.83□□□□□ -0.04
PDLIM4-206ENST00000474421 MIFP14174 115 aa14.83□□□□□ -0.04
PDLIM4-206ENST00000474421 PYDC2Q56P42 97 aa14.83□□□□□ -0.04
PDLIM4-206ENST00000474421 TMEM128Q5BJH2 165 aa14.83□□□□□ -0.04
PDLIM4-206ENST00000474421 PSMG4Q5JS54 123 aa14.83□□□□□ -0.04
PDLIM4-206ENST00000474421 LGALS9CQ6DKI2 356 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms