RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 C8orf88P0DMB2 117 aa10.41□□□□□ -0.74
USF1-205ENST00000473969 TOMM20LQ6UXN7 152 aa10.41□□□□□ -0.74
USF1-205ENST00000473969 GSG1LQ6UXU4 331 aa10.41□□□□□ -0.74
USF1-205ENST00000473969 ADAMTSL5Q6ZMM2 481 aa10.41□□□□□ -0.74
USF1-205ENST00000473969 Q8WTZ3 238 aa10.41□□□□□ -0.74
USF1-205ENST00000473969 TMEM170AQ8WVE7 144 aa10.41□□□□□ -0.74
USF1-205ENST00000473969 NPIPB3Q92617 1050 aa10.41□□□□□ -0.74
USF1-205ENST00000473969 NARS2Q96I59 477 aaKnown RBP10.41□□□□□ -0.74
USF1-205ENST00000473969 OR10C1Q96KK4 312 aa10.41□□□□□ -0.74
USF1-205ENST00000473969 RAB40CQ96S21 281 aa10.41□□□□□ -0.74
USF1-205ENST00000473969 TRAV25A0A0B4J276 109 aa10.4□□□□□ -0.74
USF1-205ENST00000473969 SNRPGP15A8MWD9 76 aa10.4□□□□□ -0.74
USF1-205ENST00000473969 L7N2F9 121 aa10.4□□□□□ -0.74
USF1-205ENST00000473969 FABP1P07148 127 aa10.4□□□□□ -0.74
USF1-205ENST00000473969 EDN2P20800 178 aa10.4□□□□□ -0.74
USF1-205ENST00000473969 VAMP2P63027 116 aa10.4□□□□□ -0.74
USF1-205ENST00000473969 TIGITQ495A1 244 aa10.4□□□□□ -0.74
USF1-205ENST00000473969 C2orf50Q96LR7 162 aa10.4□□□□□ -0.74
USF1-205ENST00000473969 TMEM231Q9H6L2 316 aa10.4□□□□□ -0.74
USF1-205ENST00000473969 MRPL36Q9P0J6 103 aaKnown RBP10.4□□□□□ -0.74
USF1-205ENST00000473969 MLXQ9UH92 298 aa10.4□□□□□ -0.74
USF1-205ENST00000473969 LSM4Q9Y4Z0 139 aaKnown RBP10.4□□□□□ -0.74
USF1-205ENST00000473969 IGHV7-4-1A0A0J9YVY3 117 aa10.39□□□□□ -0.75
USF1-205ENST00000473969 IZUMO1RA6ND01 250 aa10.39□□□□□ -0.75
USF1-205ENST00000473969 ZFP92A6NM28 416 aa10.39□□□□□ -0.75
USF1-205ENST00000473969 H3BP45 60 aa10.39□□□□□ -0.75
USF1-205ENST00000473969 SCAF4O95104 1147 aaKnown RBP10.39□□□□□ -0.75
USF1-205ENST00000473969 IGLC1P0CG04 106 aa10.39□□□□□ -0.75
USF1-205ENST00000473969 PVALBP20472 110 aaPredicted RBP10.39□□□□□ -0.75
USF1-205ENST00000473969 NPPCP23582 126 aa10.39□□□□□ -0.75
USF1-205ENST00000473969 YPEL3P61236 119 aaPredicted RBP10.39□□□□□ -0.75
USF1-205ENST00000473969 WDR89Q96FK6 387 aaPredicted RBP10.39□□□□□ -0.75
USF1-205ENST00000473969 SMIM8Q96KF7 97 aa10.39□□□□□ -0.75
USF1-205ENST00000473969 METTL26Q96S19 204 aa10.39□□□□□ -0.75
USF1-205ENST00000473969 MARVELD1Q9BSK0 173 aa10.39□□□□□ -0.75
USF1-205ENST00000473969 RHPN1-AS1Q9BWJ2 59 aa10.39□□□□□ -0.75
USF1-205ENST00000473969 SMPXQ9UHP9 88 aa10.39□□□□□ -0.75
USF1-205ENST00000473969 LSM5Q9Y4Y9 91 aaKnown RBP10.39□□□□□ -0.75
USF1-205ENST00000473969 SELENOKQ9Y6D0 94 aa10.39□□□□□ -0.75
USF1-205ENST00000473969 A0A1W2PS18 150 aa10.38□□□□□ -0.75
USF1-205ENST00000473969 MBPP02686 304 aaPredicted RBP10.38□□□□□ -0.75
USF1-205ENST00000473969 CD5P06127 495 aa10.38□□□□□ -0.75
USF1-205ENST00000473969 RD3LP0DJH9 198 aa10.38□□□□□ -0.75
USF1-205ENST00000473969 TAS2R30P59541 319 aa10.38□□□□□ -0.75
USF1-205ENST00000473969 CD81P60033 236 aa10.38□□□□□ -0.75
USF1-205ENST00000473969 TMEM61Q8N0U2 210 aa10.38□□□□□ -0.75
USF1-205ENST00000473969 TUBA4BQ9H853 241 aa10.38□□□□□ -0.75
USF1-205ENST00000473969 SORL1Q92673 2214 aa10.37□□□□□ -0.75
USF1-205ENST00000473969 IGHV3-49A0A0A0MS15 119 aa10.37□□□□□ -0.75
USF1-205ENST00000473969 ZNF785A8K8V0 405 aa10.37□□□□□ -0.75
USF1-205ENST00000473969 CHEK1O14757 476 aa10.37□□□□□ -0.75
USF1-205ENST00000473969 SSNA1O43805 119 aa10.37□□□□□ -0.75
USF1-205ENST00000473969 TSC22D2O75157 780 aa10.37□□□□□ -0.75
USF1-205ENST00000473969 IGKV1-17P01599 117 aa10.37□□□□□ -0.75
USF1-205ENST00000473969 BCAP31P51572 246 aa10.37□□□□□ -0.75
USF1-205ENST00000473969 S100A10P60903 97 aa10.37□□□□□ -0.75
USF1-205ENST00000473969 GAMTQ14353 236 aa10.37□□□□□ -0.75
USF1-205ENST00000473969 OR8G2PQ6IF36 304 aa10.37□□□□□ -0.75
USF1-205ENST00000473969 OR10P1Q8NGE3 313 aa10.37□□□□□ -0.75
USF1-205ENST00000473969 GRAMD2BQ96HH9 432 aa10.37□□□□□ -0.75
USF1-205ENST00000473969 B9D2Q9BPU9 175 aa10.37□□□□□ -0.75
USF1-205ENST00000473969 NEURL2Q9BR09 285 aa10.37□□□□□ -0.75
USF1-205ENST00000473969 PFDN2Q9UHV9 154 aa10.37□□□□□ -0.75
USF1-205ENST00000473969 RCL1Q9Y2P8 373 aaKnown RBP10.37□□□□□ -0.75
USF1-205ENST00000473969 SMCO3A2RU48 225 aa10.36□□□□□ -0.75
USF1-205ENST00000473969 GOSR2O14653 212 aa10.36□□□□□ -0.75
USF1-205ENST00000473969 PTTG1O95997 202 aa10.36□□□□□ -0.75
USF1-205ENST00000473969 TOMM40O96008 361 aa10.36□□□□□ -0.75
USF1-205ENST00000473969 RPL11P62913 178 aaKnown RBP10.36□□□□□ -0.75
USF1-205ENST00000473969 PAFAH1B2P68402 229 aa10.36□□□□□ -0.75
USF1-205ENST00000473969 AKR1C1Q04828 323 aa10.36□□□□□ -0.75
USF1-205ENST00000473969 SPAG8Q99932 426 aaPredicted RBP10.36□□□□□ -0.75
USF1-205ENST00000473969 ZFAND3Q9H8U3 227 aa10.36□□□□□ -0.75
USF1-205ENST00000473969 TGP01266 2768 aa10.35□□□□□ -0.75
USF1-205ENST00000473969 IGHV3OR16-13A0A075B7E8 117 aa10.35□□□□□ -0.75
USF1-205ENST00000473969 IGHV3-74A0A0B4J1X5 117 aa10.35□□□□□ -0.75
USF1-205ENST00000473969 OR4C46A6NHA9 309 aa10.35□□□□□ -0.75
USF1-205ENST00000473969 TSPAN4O14817 238 aa10.35□□□□□ -0.75
USF1-205ENST00000473969 RLN2P04090 185 aa10.35□□□□□ -0.75
USF1-205ENST00000473969 IL4P05112 153 aa10.35□□□□□ -0.75
USF1-205ENST00000473969 METTL15P1P0C7V9 234 aa10.35□□□□□ -0.75
USF1-205ENST00000473969 CYCSP99999 105 aaKnown RBP10.35□□□□□ -0.75
USF1-205ENST00000473969 Q8N1Y9 231 aa10.35□□□□□ -0.75
USF1-205ENST00000473969 OR51G1Q8NGK1 321 aa10.35□□□□□ -0.75
USF1-205ENST00000473969 RNF2Q99496 336 aa10.35□□□□□ -0.75
USF1-205ENST00000473969 MGAT4CQ9UBM8 478 aa10.35□□□□□ -0.75
USF1-205ENST00000473969 C7orf66A4D0T2 115 aa10.34□□□□□ -0.75
USF1-205ENST00000473969 OR11H12B2RN74 326 aa10.34□□□□□ -0.75
USF1-205ENST00000473969 K7EPK0 472 aa10.34□□□□□ -0.75
USF1-205ENST00000473969 HNRNPCP07910 306 aaKnown RBP eCLIP10.34□□□□□ -0.75
USF1-205ENST00000473969 CD7P09564 240 aa10.34□□□□□ -0.75
USF1-205ENST00000473969 IGHV4-30-4P0DP06 118 aa10.34□□□□□ -0.75
USF1-205ENST00000473969 PSG1P11464 419 aa10.34□□□□□ -0.75
USF1-205ENST00000473969 EIF2B2P49770 351 aaKnown RBP10.34□□□□□ -0.75
USF1-205ENST00000473969 CAV2P51636 162 aa10.34□□□□□ -0.75
USF1-205ENST00000473969 ACOT7LQ6ZUV0 252 aa10.34□□□□□ -0.75
USF1-205ENST00000473969 TCF24Q7RTU0 167 aa10.34□□□□□ -0.75
USF1-205ENST00000473969 ST8SIA2Q92186 375 aa10.34□□□□□ -0.75
USF1-205ENST00000473969 TRGV9Q99603 122 aa10.34□□□□□ -0.75
USF1-205ENST00000473969 PBDC1Q9BVG4 233 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms