RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 U3KQ87 197 aa9.69□□□□□ -0.86
SHROOM3-204ENST00000473602 OR4C46A6NHA9 309 aa9.68□□□□□ -0.86
SHROOM3-204ENST00000473602 FAM90A26D6RGX4 464 aa9.68□□□□□ -0.86
SHROOM3-204ENST00000473602 CHEK1O14757 476 aa9.68□□□□□ -0.86
SHROOM3-204ENST00000473602 PITX3O75364 302 aa9.68□□□□□ -0.86
SHROOM3-204ENST00000473602 NXPH3O95157 252 aa9.68□□□□□ -0.86
SHROOM3-204ENST00000473602 CNPY1Q3B7I2 92 aa9.68□□□□□ -0.86
SHROOM3-204ENST00000473602 DEFB125Q8N687 156 aa9.68□□□□□ -0.86
SHROOM3-204ENST00000473602 RHPN1-AS1Q9BWJ2 59 aa9.68□□□□□ -0.86
SHROOM3-204ENST00000473602 ZFAND3Q9H8U3 227 aa9.68□□□□□ -0.86
SHROOM3-204ENST00000473602 PUS1Q9Y606 427 aaKnown RBP eCLIP9.68□□□□□ -0.86
SHROOM3-204ENST00000473602 IFNA10P01566 189 aa9.67□□□□□ -0.86
SHROOM3-204ENST00000473602 OR1S2Q8NGQ3 325 aa9.67□□□□□ -0.86
SHROOM3-204ENST00000473602 TMEM170AQ8WVE7 144 aa9.67□□□□□ -0.86
SHROOM3-204ENST00000473602 RNF2Q99496 336 aa9.67□□□□□ -0.86
SHROOM3-204ENST00000473602 WFDC10AQ9H1F0 79 aa9.67□□□□□ -0.86
SHROOM3-204ENST00000473602 RBKSQ9H477 322 aa9.67□□□□□ -0.86
SHROOM3-204ENST00000473602 TMEM231Q9H6L2 316 aa9.67□□□□□ -0.86
SHROOM3-204ENST00000473602 MRPL36Q9P0J6 103 aaKnown RBP9.67□□□□□ -0.86
SHROOM3-204ENST00000473602 FRAS1Q86XX4 4008 aa9.66□□□□□ -0.86
SHROOM3-204ENST00000473602 C9orf170A2RU37 121 aa9.66□□□□□ -0.86
SHROOM3-204ENST00000473602 RBMY1BA6NDE4 496 aaKnown RBP9.66□□□□□ -0.86
SHROOM3-204ENST00000473602 RBMY1EA6NEQ0 496 aaKnown RBP9.66□□□□□ -0.86
SHROOM3-204ENST00000473602 MED6O75586 246 aa9.66□□□□□ -0.86
SHROOM3-204ENST00000473602 IGKV1-17P01599 117 aa9.66□□□□□ -0.86
SHROOM3-204ENST00000473602 RBMY1DP0C7P1 496 aaKnown RBP9.66□□□□□ -0.86
SHROOM3-204ENST00000473602 BTCP35070 178 aa9.66□□□□□ -0.86
SHROOM3-204ENST00000473602 RND2P52198 227 aa9.66□□□□□ -0.86
SHROOM3-204ENST00000473602 CMC4P56277 68 aaPredicted RBP9.66□□□□□ -0.86
SHROOM3-204ENST00000473602 MLANAQ16655 118 aa9.66□□□□□ -0.86
SHROOM3-204ENST00000473602 PRSS54Q6PEW0 395 aa9.66□□□□□ -0.86
SHROOM3-204ENST00000473602 VSIRQ9H7M9 311 aa9.66□□□□□ -0.86
SHROOM3-204ENST00000473602 A0A1W2PS18 150 aa9.65□□□□□ -0.86
SHROOM3-204ENST00000473602 IGLC1P0CG04 106 aa9.65□□□□□ -0.86
SHROOM3-204ENST00000473602 NPPCP23582 126 aa9.65□□□□□ -0.86
SHROOM3-204ENST00000473602 YPEL3P61236 119 aaPredicted RBP9.65□□□□□ -0.86
SHROOM3-204ENST00000473602 FAM90A2PQ658T7 463 aa9.65□□□□□ -0.86
SHROOM3-204ENST00000473602 COQ8AQ8NI60 647 aa9.65□□□□□ -0.86
SHROOM3-204ENST00000473602 CIB3Q96Q77 187 aaPredicted RBP9.65□□□□□ -0.86
SHROOM3-204ENST00000473602 METTL26Q96S19 204 aa9.65□□□□□ -0.86
SHROOM3-204ENST00000473602 CCDC32Q9BV29 185 aa9.65□□□□□ -0.86
SHROOM3-204ENST00000473602 LOC102724200A0A096LPH7 203 aaPredicted RBP9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 IGHV3-49A0A0A0MS15 119 aa9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 LINC00854A0A1B0GVQ3 168 aa9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 IFNA4P05014 189 aa9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 OR4E1P0C645 316 aa9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 CRYBB3P26998 211 aa9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 OR10J1P30954 320 aa9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 PAFAH1B2P68402 229 aa9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 RPP30P78346 268 aaKnown RBP9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 DHRS2Q13268 280 aa9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 ODF3L2Q3SX64 289 aa9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 TIGITQ495A1 244 aa9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 LYG2Q86SG7 212 aa9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 Q8WTZ3 238 aa9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 ST8SIA2Q92186 375 aa9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 NARS2Q96I59 477 aaKnown RBP9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 GGTLC1Q9BX51 225 aa9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 HERC2O95714 4834 aa9.64□□□□□ -0.87
SHROOM3-204ENST00000473602 TRAV2A0A0B4J234 112 aa9.63□□□□□ -0.87
SHROOM3-204ENST00000473602 LYRM1O43325 122 aa9.63□□□□□ -0.87
SHROOM3-204ENST00000473602 SYNGR2O43760 224 aa9.63□□□□□ -0.87
SHROOM3-204ENST00000473602 HOXB5P09067 269 aa9.63□□□□□ -0.87
SHROOM3-204ENST00000473602 GPX4P36969 197 aaPredicted RBP9.63□□□□□ -0.87
SHROOM3-204ENST00000473602 RAB11AP62491 216 aa9.63□□□□□ -0.87
SHROOM3-204ENST00000473602 GGNBP1Q5YKI7 109 aa9.63□□□□□ -0.87
SHROOM3-204ENST00000473602 TCF24Q7RTU0 167 aa9.63□□□□□ -0.87
SHROOM3-204ENST00000473602 S100ZQ8WXG8 99 aa9.63□□□□□ -0.87
SHROOM3-204ENST00000473602 NPIPB3Q92617 1050 aa9.63□□□□□ -0.87
SHROOM3-204ENST00000473602 FLVCR2Q9UPI3 526 aa9.63□□□□□ -0.87
SHROOM3-204ENST00000473602 IGHV3OR16-13A0A075B7E8 117 aa9.62□□□□□ -0.87
SHROOM3-204ENST00000473602 IGHV3-74A0A0B4J1X5 117 aa9.62□□□□□ -0.87
SHROOM3-204ENST00000473602 PLA2G10O15496 165 aa9.62□□□□□ -0.87
SHROOM3-204ENST00000473602 TOMM40O96008 361 aa9.62□□□□□ -0.87
SHROOM3-204ENST00000473602 IFNA21P01568 189 aa9.62□□□□□ -0.87
SHROOM3-204ENST00000473602 APOHP02749 345 aaPredicted RBP9.62□□□□□ -0.87
SHROOM3-204ENST00000473602 APOC4P55056 127 aa9.62□□□□□ -0.87
SHROOM3-204ENST00000473602 C4orf46Q504U0 113 aa9.62□□□□□ -0.87
SHROOM3-204ENST00000473602 ACY3Q96HD9 319 aa9.62□□□□□ -0.87
SHROOM3-204ENST00000473602 GRAMD2BQ96HH9 432 aa9.62□□□□□ -0.87
SHROOM3-204ENST00000473602 SLC35E1Q96K37 410 aa9.62□□□□□ -0.87
SHROOM3-204ENST00000473602 C20orf85Q9H1P6 137 aa9.62□□□□□ -0.87
SHROOM3-204ENST00000473602 PTTG2Q9NZH5 202 aa9.62□□□□□ -0.87
SHROOM3-204ENST00000473602 UBQLN2Q9UHD9 624 aa9.62□□□□□ -0.87
SHROOM3-204ENST00000473602 DFFBO76075 338 aa9.61□□□□□ -0.87
SHROOM3-204ENST00000473602 FABP1P07148 127 aa9.61□□□□□ -0.87
SHROOM3-204ENST00000473602 HNRNPCP07910 306 aaKnown RBP eCLIP9.61□□□□□ -0.87
SHROOM3-204ENST00000473602 IAPPP10997 89 aa9.61□□□□□ -0.87
SHROOM3-204ENST00000473602 ANXA7P20073 488 aaKnown RBP9.61□□□□□ -0.87
SHROOM3-204ENST00000473602 EIF2B2P49770 351 aaKnown RBP9.61□□□□□ -0.87
SHROOM3-204ENST00000473602 ID3Q02535 119 aa9.61□□□□□ -0.87
SHROOM3-204ENST00000473602 IL17DQ8TAD2 202 aa9.61□□□□□ -0.87
SHROOM3-204ENST00000473602 U3KQE9 123 aa9.61□□□□□ -0.87
SHROOM3-204ENST00000473602 KIR2DL5BA0A0G2JN68 375 aa9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 KIR2DL5BA0A0G2JPC4 375 aa9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 DNASE2O00115 360 aaPredicted RBP9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 UBE2CO00762 179 aa9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 ADAP1O75689 374 aa9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 TCRBP04435 133 aa9.6□□□□□ -0.87
SHROOM3-204ENST00000473602 IL4P05112 153 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms