RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 RABAC1Q9UI14 185 aa8.63□□□□□ -1.03
CPNE1-222ENST00000473373 A0A1B0GU03 582 aa8.62□□□□□ -1.03
CPNE1-222ENST00000473373 WRBO00258 174 aa8.62□□□□□ -1.03
CPNE1-222ENST00000473373 CD5P06127 495 aa8.62□□□□□ -1.03
CPNE1-222ENST00000473373 IAPPP10997 89 aa8.62□□□□□ -1.03
CPNE1-222ENST00000473373 RPL35AP18077 110 aaKnown RBP8.62□□□□□ -1.03
CPNE1-222ENST00000473373 OR10J1P30954 320 aa8.62□□□□□ -1.03
CPNE1-222ENST00000473373 EIF2B2P49770 351 aaKnown RBP8.62□□□□□ -1.03
CPNE1-222ENST00000473373 CMC4P56277 68 aaPredicted RBP8.62□□□□□ -1.03
CPNE1-222ENST00000473373 RAB11AP62491 216 aa8.62□□□□□ -1.03
CPNE1-222ENST00000473373 PPP1R1AQ13522 171 aa8.62□□□□□ -1.03
CPNE1-222ENST00000473373 C4orf46Q504U0 113 aa8.62□□□□□ -1.03
CPNE1-222ENST00000473373 ZFAND6Q6FIF0 208 aa8.62□□□□□ -1.03
CPNE1-222ENST00000473373 OR1S2Q8NGQ3 325 aa8.62□□□□□ -1.03
CPNE1-222ENST00000473373 Q8WTZ3 238 aa8.62□□□□□ -1.03
CPNE1-222ENST00000473373 ST8SIA2Q92186 375 aa8.62□□□□□ -1.03
CPNE1-222ENST00000473373 SLC35E1Q96K37 410 aa8.62□□□□□ -1.03
CPNE1-222ENST00000473373 OR10C1Q96KK4 312 aa8.62□□□□□ -1.03
CPNE1-222ENST00000473373 FNDC4Q9H6D8 234 aaPredicted RBP8.62□□□□□ -1.03
CPNE1-222ENST00000473373 U3KQ87 197 aa8.62□□□□□ -1.03
CPNE1-222ENST00000473373 SFT2D2O95562 160 aa8.61□□□□□ -1.03
CPNE1-222ENST00000473373 IFNA21P01568 189 aa8.61□□□□□ -1.03
CPNE1-222ENST00000473373 RPP30P78346 268 aaKnown RBP8.61□□□□□ -1.03
CPNE1-222ENST00000473373 BAK1Q16611 211 aa8.61□□□□□ -1.03
CPNE1-222ENST00000473373 NMSQ5H8A3 153 aa8.61□□□□□ -1.03
CPNE1-222ENST00000473373 STPG3Q8N7X2 389 aa8.61□□□□□ -1.03
CPNE1-222ENST00000473373 STXBP6Q8NFX7 210 aa8.61□□□□□ -1.03
CPNE1-222ENST00000473373 COQ8AQ8NI60 647 aa8.61□□□□□ -1.03
CPNE1-222ENST00000473373 HSPB7Q9UBY9 170 aa8.61□□□□□ -1.03
CPNE1-222ENST00000473373 TMED3Q9Y3Q3 217 aa8.61□□□□□ -1.03
CPNE1-222ENST00000473373 ZFP92A6NM28 416 aa8.6□□□□□ -1.03
CPNE1-222ENST00000473373 BSXQ3C1V8 233 aa8.6□□□□□ -1.03
CPNE1-222ENST00000473373 AARDQ4LEZ3 155 aa8.6□□□□□ -1.03
CPNE1-222ENST00000473373 CASC10Q5T4H9 136 aa8.6□□□□□ -1.03
CPNE1-222ENST00000473373 APRG1Q8IVJ8 170 aa8.6□□□□□ -1.03
CPNE1-222ENST00000473373 NPIPB3Q92617 1050 aa8.6□□□□□ -1.03
CPNE1-222ENST00000473373 CIB3Q96Q77 187 aaPredicted RBP8.6□□□□□ -1.03
CPNE1-222ENST00000473373 C7orf50Q9BRJ6 194 aaKnown RBP8.6□□□□□ -1.03
CPNE1-222ENST00000473373 PBDC1Q9BVG4 233 aa8.6□□□□□ -1.03
CPNE1-222ENST00000473373 MRPL36Q9P0J6 103 aaKnown RBP8.6□□□□□ -1.03
CPNE1-222ENST00000473373 TENM2Q9NT68 2774 aa8.6□□□□□ -1.03
CPNE1-222ENST00000473373 DYNC2H1Q8NCM8 4307 aaKnown RBP8.6□□□□□ -1.03
CPNE1-222ENST00000473373 DFFBO76075 338 aa8.59□□□□□ -1.03
CPNE1-222ENST00000473373 NDUFB6O95139 128 aa8.59□□□□□ -1.03
CPNE1-222ENST00000473373 SCGB1D2O95969 90 aa8.59□□□□□ -1.03
CPNE1-222ENST00000473373 APOHP02749 345 aaPredicted RBP8.59□□□□□ -1.03
CPNE1-222ENST00000473373 IL4P05112 153 aa8.59□□□□□ -1.03
CPNE1-222ENST00000473373 FABP1P07148 127 aa8.59□□□□□ -1.03
CPNE1-222ENST00000473373 HNRNPCP07910 306 aaKnown RBP eCLIP8.59□□□□□ -1.03
CPNE1-222ENST00000473373 P2RY1P47900 373 aa8.59□□□□□ -1.03
CPNE1-222ENST00000473373 UBE2MP61081 183 aaKnown RBP8.59□□□□□ -1.03
CPNE1-222ENST00000473373 PRSS54Q6PEW0 395 aa8.59□□□□□ -1.03
CPNE1-222ENST00000473373 IL17DQ8TAD2 202 aa8.59□□□□□ -1.03
CPNE1-222ENST00000473373 PPP1R14BQ96C90 147 aa8.59□□□□□ -1.03
CPNE1-222ENST00000473373 MAGT1Q9H0U3 335 aa8.59□□□□□ -1.03
CPNE1-222ENST00000473373 ZFAND3Q9H8U3 227 aa8.59□□□□□ -1.03
CPNE1-222ENST00000473373 PFDN2Q9UHV9 154 aa8.59□□□□□ -1.03
CPNE1-222ENST00000473373 FAM90A26D6RGX4 464 aa8.58□□□□□ -1.04
CPNE1-222ENST00000473373 IGLC1P0CG04 106 aa8.58□□□□□ -1.04
CPNE1-222ENST00000473373 RD3LP0DJH9 198 aa8.58□□□□□ -1.04
CPNE1-222ENST00000473373 IL7P13232 177 aa8.58□□□□□ -1.04
CPNE1-222ENST00000473373 ATP5IP56385 69 aaPredicted RBP8.58□□□□□ -1.04
CPNE1-222ENST00000473373 DEFB135Q30KP9 77 aa8.58□□□□□ -1.04
CPNE1-222ENST00000473373 ODF3L2Q3SX64 289 aa8.58□□□□□ -1.04
CPNE1-222ENST00000473373 GGNBP1Q5YKI7 109 aa8.58□□□□□ -1.04
CPNE1-222ENST00000473373 PVRIGQ6DKI7 326 aa8.58□□□□□ -1.04
CPNE1-222ENST00000473373 LINC00322Q6ZN03 302 aaPredicted RBP8.58□□□□□ -1.04
CPNE1-222ENST00000473373 MS4A6AQ9H2W1 248 aa8.58□□□□□ -1.04
CPNE1-222ENST00000473373 FLVCR2Q9UPI3 526 aa8.58□□□□□ -1.04
CPNE1-222ENST00000473373 C9orf170A2RU37 121 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 SMCO3A2RU48 225 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 HELTA6NFD8 242 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 UBE2CO00762 179 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 SYNGR2O43760 224 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 TOMM40O96008 361 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 IGKV1-17P01599 117 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 OR4E1P0C645 316 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 SLC25A6P12236 298 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 ANXA7P20073 488 aaKnown RBP8.57□□□□□ -1.04
CPNE1-222ENST00000473373 DEFB131AP59861 70 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 YPEL3P61236 119 aaPredicted RBP8.57□□□□□ -1.04
CPNE1-222ENST00000473373 LYZP61626 148 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 AKR1C1Q04828 323 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 SPANXN5Q5MJ07 72 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 LYG2Q86SG7 212 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 STHQ8IWL8 128 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 LRTM2Q8N967 370 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 VSIRQ9H7M9 311 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 MAP6D1Q9H9H5 199 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 AGRNO00468 2067 aa8.57□□□□□ -1.04
CPNE1-222ENST00000473373 H3BP45 60 aa8.56□□□□□ -1.04
CPNE1-222ENST00000473373 LYRM1O43325 122 aa8.56□□□□□ -1.04
CPNE1-222ENST00000473373 SPRY2O43597 315 aa8.56□□□□□ -1.04
CPNE1-222ENST00000473373 ADAP1O75689 374 aa8.56□□□□□ -1.04
CPNE1-222ENST00000473373 CRYBB3P26998 211 aa8.56□□□□□ -1.04
CPNE1-222ENST00000473373 NUP62P37198 522 aaPredicted RBP8.56□□□□□ -1.04
CPNE1-222ENST00000473373 AP2S1P53680 142 aaPredicted RBP8.56□□□□□ -1.04
CPNE1-222ENST00000473373 DHRS2Q13268 280 aa8.56□□□□□ -1.04
CPNE1-222ENST00000473373 ZNF846Q147U1 533 aa8.56□□□□□ -1.04
CPNE1-222ENST00000473373 ZNF124Q15973 351 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 1126.3 ms