RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 CHD3Q12873 2000 aaKnown RBP1.65□□□□□ -2.15
XRN1-210ENST00000472697 POLEQ07864 2286 aa1.65□□□□□ -2.15
XRN1-210ENST00000472697 FBN1P35555 2871 aaKnown RBP1.64□□□□□ -2.15
XRN1-210ENST00000472697 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.64□□□□□ -2.15
XRN1-210ENST00000472697 TEX50A0A1B0GTY4 177 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 PINLYPA6NC86 204 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 OR4C45A6NMZ5 311 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 C16orf90A8MZG2 172 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 NOS1APO75052 506 aaPredicted RBP1.64□□□□□ -2.15
XRN1-210ENST00000472697 POP7O75817 140 aaKnown RBP1.64□□□□□ -2.15
XRN1-210ENST00000472697 OR7C1O76099 320 aaPredicted RBP1.64□□□□□ -2.15
XRN1-210ENST00000472697 ZNF682O95780 498 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 IGLV1-47P01700 117 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 HLA-DRB1P01911 266 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 TFPTP0C1Z6 253 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 CDK2P24941 298 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 SERPINB1P30740 379 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 CST6Q15828 149 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 FAM104BQ5XKR9 115 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 IGFL3Q6UXB1 125 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 KRTAP5-2Q701N4 177 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 GKN2Q86XP6 184 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 ANGPTL5Q86XS5 388 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 AMN1Q8IY45 258 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 MRPL48Q96GC5 212 aaKnown RBP1.64□□□□□ -2.15
XRN1-210ENST00000472697 NARS2Q96I59 477 aaKnown RBP1.64□□□□□ -2.15
XRN1-210ENST00000472697 IGF2BP2-AS1Q96M15 143 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 CNBD2Q96M20 576 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 OR7D2Q96RA2 312 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 KIFC1Q9BW19 673 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 FBXL12Q9NXK8 326 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 LINC00588Q9Y4M8 146 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 ZFC3H1O60293 1989 aaKnown RBP1.64□□□□□ -2.15
XRN1-210ENST00000472697 IGLV3-10A0A075B6K4 115 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 IGKV1D-37A0A075B6S9 117 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 TRAV8-1A0A0A6YYK1 113 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 A0A1W2PNU3 283 aaPredicted RBP1.64□□□□□ -2.15
XRN1-210ENST00000472697 IGSF23A1L1A6 192 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 CD300LBA8K4G0 201 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 MRPL3P09001 348 aaKnown RBP1.64□□□□□ -2.15
XRN1-210ENST00000472697 TPI1P60174 286 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 ZNF616Q08AN1 781 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 OR8G1Q15617 311 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 Q5W150 140 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 C1orf158Q8N1D5 194 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 ZNF615Q8N8J6 731 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 GALMQ96C23 342 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 C12orf43Q96C57 262 aaKnown RBP1.64□□□□□ -2.15
XRN1-210ENST00000472697 GNPNAT1Q96EK6 184 aaPredicted RBP1.64□□□□□ -2.15
XRN1-210ENST00000472697 PHYHIPLQ96FC7 376 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 OR8D2Q9GZM6 311 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 IFI27L2Q9H2X8 130 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 TMEM56-RWDD3S4R434 201 aa1.64□□□□□ -2.15
XRN1-210ENST00000472697 FN1P02751 2386 aaKnown RBP1.64□□□□□ -2.15
XRN1-210ENST00000472697 SPTY2D1-AS1A0A0U1RR47 76 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 MED6O75586 246 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 OR2B3O76000 313 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 KLF3P57682 345 aaPredicted RBP1.63□□□□□ -2.15
XRN1-210ENST00000472697 IL15RAQ13261 267 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 HIST3H3Q16695 136 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 NANOGP8Q6NSW7 305 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 MSRB3Q8IXL7 192 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 OR5C1Q8NGR4 320 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 DYDC1Q8WWB3 177 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 CCL13Q99616 98 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 GINS3Q9BRX5 216 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 HMG20AQ9NP66 347 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 BATF3Q9NR55 127 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 RPUSD1Q9UJJ7 312 aaKnown RBP1.63□□□□□ -2.15
XRN1-210ENST00000472697 DMDP11532 3685 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 CELSR3Q9NYQ7 3312 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 ODAMA1E959 279 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 COLCA2A8K830 154 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 I3L521 148 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 SLC37A4O43826 429 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 IGLV3-27P01718 113 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 RPL7P18124 248 aaKnown RBP1.63□□□□□ -2.15
XRN1-210ENST00000472697 INPP1P49441 399 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 TSPEAR-AS2P59090 65 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 NCALDP61601 193 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 MSMO1Q15800 293 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 DEFB109BQ30KR1 87 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 C12orf74Q32Q52 190 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 C2orf83Q53S99 150 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 FAAP20Q6NZ36 180 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 SLC36A1Q7Z2H8 476 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 ZNF709Q8N972 641 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 STAG3L4Q8TBR4 150 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 TMA16Q96EY4 203 aaKnown RBP1.63□□□□□ -2.15
XRN1-210ENST00000472697 TBL1YQ9BQ87 522 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 CHCHD7Q9BUK0 85 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 NMNAT1Q9HAN9 279 aaPredicted RBP1.63□□□□□ -2.15
XRN1-210ENST00000472697 MYOFQ9NZM1 2061 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 CCDC168Q8NDH2 2452 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 PDZD2O15018 2839 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 APCP25054 2843 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 NCOA6Q14686 2063 aaPredicted RBP1.63□□□□□ -2.15
XRN1-210ENST00000472697 hCG_1818297A0A087WSY0 165 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 A0A1W2PRE2 83 aa1.63□□□□□ -2.15
XRN1-210ENST00000472697 A8MT66 165 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms