RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 TRIM63Q969Q1 353 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 SCGB3A2Q96PL1 93 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 METTL26Q96S19 204 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 TMEM231Q9H6L2 316 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 V9GYH0 126 aa6.64□□□□□ -1.35
USF1-204ENST00000472217 DYNC2H1Q8NCM8 4307 aaKnown RBP6.63□□□□□ -1.35
USF1-204ENST00000472217 STARD9Q9P2P6 4700 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 A0A0B4J2A0 478 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 A0A1W2PS18 150 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 CXorf65A6NEN9 183 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 MPTX1A8MV57 137 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 DNASE2O00115 360 aaPredicted RBP6.63□□□□□ -1.35
USF1-204ENST00000472217 SLC25A4P12235 298 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 NPY1RP25929 384 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 OR10J1P30954 320 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 P2RY1P47900 373 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 CCR6P51684 374 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 DEFB131AP59861 70 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 SMCO1Q147U7 214 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 ZNF79Q15937 498 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 PYDC2Q56P42 97 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 LEMD1Q68G75 181 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 STXBP6Q8NFX7 210 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 OR1S2Q8NGQ3 325 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 CSTL1Q9H114 145 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 HSPB7Q9UBY9 170 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 SHPKQ9UHJ6 478 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 RABAC1Q9UI14 185 aa6.63□□□□□ -1.35
USF1-204ENST00000472217 CCDC160A6NGH7 325 aa6.62□□□□□ -1.35
USF1-204ENST00000472217 K7EQG2 157 aa6.62□□□□□ -1.35
USF1-204ENST00000472217 CA1P00915 261 aaPredicted RBP6.62□□□□□ -1.35
USF1-204ENST00000472217 IFNA10P01566 189 aa6.62□□□□□ -1.35
USF1-204ENST00000472217 ANXA3P12429 323 aa6.62□□□□□ -1.35
USF1-204ENST00000472217 FAUP35544 74 aaKnown RBP6.62□□□□□ -1.35
USF1-204ENST00000472217 AP3S2P59780 193 aa6.62□□□□□ -1.35
USF1-204ENST00000472217 YPEL3P61236 119 aaPredicted RBP6.62□□□□□ -1.35
USF1-204ENST00000472217 SRPXP78539 464 aa6.62□□□□□ -1.35
USF1-204ENST00000472217 RBMS2Q15434 407 aaKnown RBP6.62□□□□□ -1.35
USF1-204ENST00000472217 LGI3Q8N145 548 aa6.62□□□□□ -1.35
USF1-204ENST00000472217 TOMM5Q8N4H5 51 aa6.62□□□□□ -1.35
USF1-204ENST00000472217 DTD1Q8TEA8 209 aa6.62□□□□□ -1.35
USF1-204ENST00000472217 Q8WTZ3 238 aa6.62□□□□□ -1.35
USF1-204ENST00000472217 NPIPB3Q92617 1050 aa6.62□□□□□ -1.35
USF1-204ENST00000472217 ACY3Q96HD9 319 aa6.62□□□□□ -1.35
USF1-204ENST00000472217 NARS2Q96I59 477 aaKnown RBP6.62□□□□□ -1.35
USF1-204ENST00000472217 RBM38Q9H0Z9 239 aaKnown RBP6.62□□□□□ -1.35
USF1-204ENST00000472217 RBKSQ9H477 322 aa6.62□□□□□ -1.35
USF1-204ENST00000472217 CACFD1Q9UGQ2 172 aa6.62□□□□□ -1.35
USF1-204ENST00000472217 U3KQE9 123 aa6.62□□□□□ -1.35
USF1-204ENST00000472217 NUPR2A6NF83 97 aa6.61□□□□□ -1.35
USF1-204ENST00000472217 IL4P05112 153 aa6.61□□□□□ -1.35
USF1-204ENST00000472217 HNRNPCP07910 306 aaKnown RBP eCLIP6.61□□□□□ -1.35
USF1-204ENST00000472217 ATF4P18848 351 aaPredicted RBP6.61□□□□□ -1.35
USF1-204ENST00000472217 S100A5P33763 92 aa6.61□□□□□ -1.35
USF1-204ENST00000472217 USF2Q15853 346 aaPredicted RBP6.61□□□□□ -1.35
USF1-204ENST00000472217 TMEM128Q5BJH2 165 aa6.61□□□□□ -1.35
USF1-204ENST00000472217 ETFRF1Q6IPR1 90 aa6.61□□□□□ -1.35
USF1-204ENST00000472217 TMED4Q7Z7H5 227 aa6.61□□□□□ -1.35
USF1-204ENST00000472217 CCDC190Q86UF4 302 aa6.61□□□□□ -1.35
USF1-204ENST00000472217 NOXA1Q86UR1 476 aa6.61□□□□□ -1.35
USF1-204ENST00000472217 DCANP1Q8TF63 244 aa6.61□□□□□ -1.35
USF1-204ENST00000472217 GATAD1Q8WUU5 269 aa6.61□□□□□ -1.35
USF1-204ENST00000472217 GLMPQ8WWB7 406 aa6.61□□□□□ -1.35
USF1-204ENST00000472217 GRAMD2BQ96HH9 432 aa6.61□□□□□ -1.35
USF1-204ENST00000472217 RARRES2Q99969 163 aa6.61□□□□□ -1.35
USF1-204ENST00000472217 U3KQ87 197 aa6.61□□□□□ -1.35
USF1-204ENST00000472217 DUXBA0A1W2PPF3 345 aa6.6□□□□□ -1.35
USF1-204ENST00000472217 HELTA6NFD8 242 aa6.6□□□□□ -1.35
USF1-204ENST00000472217 TOMM40O96008 361 aa6.6□□□□□ -1.35
USF1-204ENST00000472217 ZNF688P0C7X2 276 aa6.6□□□□□ -1.35
USF1-204ENST00000472217 VAMP1P23763 118 aa6.6□□□□□ -1.35
USF1-204ENST00000472217 CEMP1Q6PRD7 247 aaPredicted RBP6.6□□□□□ -1.35
USF1-204ENST00000472217 C16orf54Q6UWD8 224 aa6.6□□□□□ -1.35
USF1-204ENST00000472217 TRPT1Q86TN4 253 aaKnown RBP6.6□□□□□ -1.35
USF1-204ENST00000472217 STHQ8IWL8 128 aa6.6□□□□□ -1.35
USF1-204ENST00000472217 TMEM217Q8N7C4 229 aa6.6□□□□□ -1.35
USF1-204ENST00000472217 OR11H2Q8NH07 326 aa6.6□□□□□ -1.35
USF1-204ENST00000472217 OR1S1Q8NH92 325 aa6.6□□□□□ -1.35
USF1-204ENST00000472217 LINC00476Q8WZB0 136 aa6.6□□□□□ -1.35
USF1-204ENST00000472217 PIGBOS1A0A0B4J2F0 54 aa6.59□□□□□ -1.35
USF1-204ENST00000472217 KNCNA6PVL3 124 aa6.59□□□□□ -1.35
USF1-204ENST00000472217 PITX3O75364 302 aa6.59□□□□□ -1.35
USF1-204ENST00000472217 IFNA4P05014 189 aa6.59□□□□□ -1.35
USF1-204ENST00000472217 RD3LP0DJH9 198 aa6.59□□□□□ -1.35
USF1-204ENST00000472217 PSG1P11464 419 aa6.59□□□□□ -1.35
USF1-204ENST00000472217 EIF2B2P49770 351 aaKnown RBP6.59□□□□□ -1.35
USF1-204ENST00000472217 DHRS2Q13268 280 aa6.59□□□□□ -1.35
USF1-204ENST00000472217 LRTM2Q8N967 370 aa6.59□□□□□ -1.35
USF1-204ENST00000472217 DEDD2Q8WXF8 326 aa6.59□□□□□ -1.35
USF1-204ENST00000472217 SLC25A21Q9BQT8 299 aaPredicted RBP6.59□□□□□ -1.35
USF1-204ENST00000472217 C11orf68Q9H3H3 251 aaKnown RBP6.59□□□□□ -1.35
USF1-204ENST00000472217 IGKV1D-37A0A075B6S9 117 aa6.58□□□□□ -1.36
USF1-204ENST00000472217 ZNF701M0R085 212 aaPredicted RBP6.58□□□□□ -1.36
USF1-204ENST00000472217 DEFB4AO15263 64 aa6.58□□□□□ -1.36
USF1-204ENST00000472217 BUB3O43684 328 aa6.58□□□□□ -1.36
USF1-204ENST00000472217 GIG44P09565 113 aaPredicted RBP6.58□□□□□ -1.36
USF1-204ENST00000472217 IAPPP10997 89 aa6.58□□□□□ -1.36
USF1-204ENST00000472217 SLC25A6P12236 298 aa6.58□□□□□ -1.36
USF1-204ENST00000472217 C4BPBP20851 252 aa6.58□□□□□ -1.36
USF1-204ENST00000472217 AP2S1P53680 142 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms