RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 TMEM50AO95807 157 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 FABP1P07148 127 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 LYL1P12980 280 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 VAMP1P23763 118 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 MFAP2P55001 183 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 APOC4P55056 127 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 RAB11AP62491 216 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 ASAH1Q13510 395 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 SMCO1Q147U7 214 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 HAGHQ16775 308 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 IZUMO4Q1ZYL8 232 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 ANKRD39Q53RE8 183 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 UNQ9165/PRO28630Q6UXU0 137 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 CCDC190Q86UF4 302 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 DEFB125Q8N687 156 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 RNASEH2CQ8TDP1 164 aaKnown RBP6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 CACNG8Q8WXS5 425 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 GPR146Q96CH1 333 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 HYLS1Q96M11 299 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 METTL26Q96S19 204 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 SOSTQ9BQB4 213 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 TM2D3Q9BRN9 247 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 CHRDL1Q9BU40 450 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 RHPN1-AS1Q9BWJ2 59 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 SHPKQ9UHJ6 478 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 SMPXQ9UHP9 88 aa6.31□□□□□ -1.4
TSPAN1-205ENST00000472170 IGHV7-4-1A0A0J9YVY3 117 aa6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 A0A1B0GU03 582 aa6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 KRBOX1C9JBD0 128 aa6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 CLN5O75503 358 aa6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 IFNA21P01568 189 aa6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 IFNA4P05014 189 aa6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 CD7P09564 240 aa6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 P0C879 139 aa6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 S100A7P31151 101 aa6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 TMEM187Q14656 261 aa6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 RBMS2Q15434 407 aaKnown RBP6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 C2orf83Q53S99 150 aa6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 ADAMTSL5Q6ZMM2 481 aa6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 SLC24A4Q8NFF2 622 aa6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 OR4X1Q8NH49 305 aa6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 MUC7Q8TAX7 377 aa6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 CIB3Q96Q77 187 aaPredicted RBP6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 KMT2CQ8NEZ4 4911 aaKnown RBP6.3□□□□□ -1.4
TSPAN1-205ENST00000472170 IGHV3OR16-8A0A075B7F1 116 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 PCP4L1A6NKN8 68 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 UBE2CO00762 179 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 ZNF207O43670 478 aaKnown RBP6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 IGHV3-48P01763 117 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 H2AFB1P0C5Y9 115 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 H2AFB2P0C5Z0 115 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 RNASE2P10153 161 aaKnown RBP6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 NPY1RP25929 384 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 ADMP35318 185 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 UBE2MP61081 183 aaKnown RBP6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 RAB14P61106 215 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 COL7A1Q02388 2944 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 KLF9Q13886 244 aaPredicted RBP6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 STX12Q86Y82 276 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 EIF4E3Q8N5X7 224 aaKnown RBP6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 STPG3Q8N7X2 389 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 OR1S2Q8NGQ3 325 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 COQ8AQ8NI60 647 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 DTD1Q8TEA8 209 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 OR10C1Q96KK4 312 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 C12orf57Q99622 126 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 C7orf50Q9BRJ6 194 aaKnown RBP6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 GGTLC1Q9BX51 225 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 TBC1D24Q9ULP9 559 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 BOLA1Q9Y3E2 137 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 TMED3Q9Y3Q3 217 aa6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 PUS1Q9Y606 427 aaKnown RBP eCLIP6.29□□□□□ -1.4
TSPAN1-205ENST00000472170 IGKV3-7A0A075B6H7 116 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 FAM90A26D6RGX4 464 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 WRBO00258 174 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 CHEK1O14757 476 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 SFT2D2O95562 160 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 IFNA7P01567 189 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 SMIM6P0DI80 62 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 SLC25A6P12236 298 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 NUP62P37198 522 aaPredicted RBP6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 MEOX2P50222 304 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 TNFRSF9Q07011 255 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 ZNF124Q15973 351 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 AARDQ4LEZ3 155 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 TEX261Q6UWH6 196 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 TOMM20LQ6UXN7 152 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 Q6ZRM9 215 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 TCF24Q7RTU0 167 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 LYZL2Q7Z4W2 148 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 COMMD7Q86VX2 200 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 C9orf62Q8N4C0 152 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 CLRN3Q8NCR9 226 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 SLC35E1Q96K37 410 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 FAM110AQ9BQ89 295 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 SELENOKQ9Y6D0 94 aa6.28□□□□□ -1.4
TSPAN1-205ENST00000472170 HELTA6NFD8 242 aa6.27□□□□□ -1.41
TSPAN1-205ENST00000472170 MPTX1A8MV57 137 aa6.27□□□□□ -1.41
TSPAN1-205ENST00000472170 DFFBO76075 338 aa6.27□□□□□ -1.41
TSPAN1-205ENST00000472170 NXPH3O95157 252 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms