RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 PRRX1P54821 245 aa12□□□□□ -0.49
UBXN11-213ENST00000472155 UBE2L3P68036 154 aaKnown RBP12□□□□□ -0.49
UBXN11-213ENST00000472155 ZNF600Q6ZNG1 722 aa12□□□□□ -0.49
UBXN11-213ENST00000472155 RNASEH2CQ8TDP1 164 aaKnown RBP12□□□□□ -0.49
UBXN11-213ENST00000472155 FAM103A1Q9BTL3 118 aaKnown RBP12□□□□□ -0.49
UBXN11-213ENST00000472155 COX7A2P2O60397 106 aa12□□□□□ -0.49
UBXN11-213ENST00000472155 SPINK4O60575 86 aa12□□□□□ -0.49
UBXN11-213ENST00000472155 C11orf71Q6IPW1 123 aa12□□□□□ -0.49
UBXN11-213ENST00000472155 PPP1R27Q86WC6 154 aa12□□□□□ -0.49
UBXN11-213ENST00000472155 OR8B3Q8NGG8 313 aa12□□□□□ -0.49
UBXN11-213ENST00000472155 SGK494Q96LW2 274 aa12□□□□□ -0.49
UBXN11-213ENST00000472155 OR8B2Q96RD0 313 aa12□□□□□ -0.49
UBXN11-213ENST00000472155 TXNDC17Q9BRA2 123 aa12□□□□□ -0.49
UBXN11-213ENST00000472155 TRAV34A0A0B4J273 112 aa11.99□□□□□ -0.49
UBXN11-213ENST00000472155 HELTA6NFD8 242 aa11.99□□□□□ -0.49
UBXN11-213ENST00000472155 LY6LH3BQJ8 138 aa11.99□□□□□ -0.49
UBXN11-213ENST00000472155 COMPP49747 757 aaPredicted RBP11.99□□□□□ -0.49
UBXN11-213ENST00000472155 SLC35B1P78383 322 aa11.99□□□□□ -0.49
UBXN11-213ENST00000472155 TEX45Q8NA69 505 aa11.99□□□□□ -0.49
UBXN11-213ENST00000472155 TMEM167BQ9NRX6 74 aa11.99□□□□□ -0.49
UBXN11-213ENST00000472155 IGLV2-8P01709 118 aa11.99□□□□□ -0.49
UBXN11-213ENST00000472155 TYMSP04818 313 aa11.99□□□□□ -0.49
UBXN11-213ENST00000472155 CD99P14209 185 aa11.99□□□□□ -0.49
UBXN11-213ENST00000472155 UQCRFS1P47985 274 aa11.99□□□□□ -0.49
UBXN11-213ENST00000472155 ATP5IP56385 69 aaPredicted RBP11.99□□□□□ -0.49
UBXN11-213ENST00000472155 C10orf113Q5VZT2 155 aa11.99□□□□□ -0.49
UBXN11-213ENST00000472155 KCNIP4Q6PIL6 250 aa11.99□□□□□ -0.49
UBXN11-213ENST00000472155 OR1B1Q8NGR6 318 aa11.99□□□□□ -0.49
UBXN11-213ENST00000472155 OR1P1Q8NH06 330 aa11.99□□□□□ -0.49
UBXN11-213ENST00000472155 TNFRSF19Q9NS68 423 aa11.99□□□□□ -0.49
UBXN11-213ENST00000472155 AMBPP02760 352 aa11.98□□□□□ -0.49
UBXN11-213ENST00000472155 GNG5P63218 68 aa11.98□□□□□ -0.49
UBXN11-213ENST00000472155 LINC00305Q7Z4B0 112 aa11.98□□□□□ -0.49
UBXN11-213ENST00000472155 MMD2Q8IY49 270 aa11.98□□□□□ -0.49
UBXN11-213ENST00000472155 THAP8Q8NA92 274 aa11.98□□□□□ -0.49
UBXN11-213ENST00000472155 BEND2Q8NDZ0 799 aa11.98□□□□□ -0.49
UBXN11-213ENST00000472155 PACRGQ96M98 296 aaPredicted RBP11.98□□□□□ -0.49
UBXN11-213ENST00000472155 PITPNC1Q9UKF7 332 aa11.98□□□□□ -0.49
UBXN11-213ENST00000472155 S4R3C0 116 aa11.98□□□□□ -0.49
UBXN11-213ENST00000472155 IGSF10Q6WRI0 2623 aa11.98□□□□□ -0.49
UBXN11-213ENST00000472155 NUPR1O60356 82 aa11.98□□□□□ -0.49
UBXN11-213ENST00000472155 CA1P00915 261 aaPredicted RBP11.98□□□□□ -0.49
UBXN11-213ENST00000472155 CBLN1P23435 193 aa11.98□□□□□ -0.49
UBXN11-213ENST00000472155 GNG4P50150 75 aa11.98□□□□□ -0.49
UBXN11-213ENST00000472155 LY6G5BQ8NDX9 201 aa11.98□□□□□ -0.49
UBXN11-213ENST00000472155 OR51M1Q9H341 326 aa11.98□□□□□ -0.49
UBXN11-213ENST00000472155 V9GYV3 84 aa11.98□□□□□ -0.49
UBXN11-213ENST00000472155 ELOA3CA0A087WX78 387 aaPredicted RBP11.97□□□□□ -0.49
UBXN11-213ENST00000472155 TGOLN2O43493 480 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 LIPFP07098 398 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 SUB1P53999 127 aaKnown RBP eCLIP11.97□□□□□ -0.49
UBXN11-213ENST00000472155 TAS2R45P59539 299 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 ERVFC1-1P60608 527 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 FOXL1Q12952 345 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 KLF17Q5JT82 389 aaPredicted RBP11.97□□□□□ -0.49
UBXN11-213ENST00000472155 TMEM183AQ8IXX5 376 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 DYNAPQ8N1N2 210 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 C8orf46Q8TAG6 207 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 SRSF12Q8WXF0 261 aaKnown RBP11.97□□□□□ -0.49
UBXN11-213ENST00000472155 RAB1BQ9H0U4 201 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 CBLN4Q9NTU7 201 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 TRAPPC1Q9Y5R8 145 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 CRYGCP07315 174 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 TCL1AP56279 114 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 TMEM256Q8N2U0 113 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 BLNKQ8WV28 456 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 TNFRSF14Q92956 283 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 FXYD5Q96DB9 178 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 PAXXQ9BUH6 204 aa11.97□□□□□ -0.49
UBXN11-213ENST00000472155 GRIFINA4D1Z8 144 aa11.96□□□□□ -0.49
UBXN11-213ENST00000472155 C9JCJ5 164 aa11.96□□□□□ -0.49
UBXN11-213ENST00000472155 ZFP36P26651 326 aaKnown RBP11.96□□□□□ -0.49
UBXN11-213ENST00000472155 PLGLAQ15195 96 aa11.96□□□□□ -0.49
UBXN11-213ENST00000472155 ZFYVE26Q68DK2 2539 aa11.96□□□□□ -0.49
UBXN11-213ENST00000472155 MGST1P10620 155 aaKnown RBP11.96□□□□□ -0.5
UBXN11-213ENST00000472155 ADMP35318 185 aa11.96□□□□□ -0.5
UBXN11-213ENST00000472155 RANP62826 216 aaKnown RBP11.96□□□□□ -0.5
UBXN11-213ENST00000472155 MMDQ15546 238 aa11.96□□□□□ -0.5
UBXN11-213ENST00000472155 FAM168AQ92567 244 aa11.96□□□□□ -0.5
UBXN11-213ENST00000472155 CACNA1AO00555 2505 aa11.95□□□□□ -0.5
UBXN11-213ENST00000472155 LCN2P80188 198 aa11.95□□□□□ -0.5
UBXN11-213ENST00000472155 TPTE2P1Q5T6R2 138 aa11.95□□□□□ -0.5
UBXN11-213ENST00000472155 Q71RC1 249 aaPredicted RBP11.95□□□□□ -0.5
UBXN11-213ENST00000472155 OR8I2Q8N0Y5 310 aa11.95□□□□□ -0.5
UBXN11-213ENST00000472155 IGF2BP2-AS1Q96M15 143 aa11.95□□□□□ -0.5
UBXN11-213ENST00000472155 USP9XQ93008 2570 aaPredicted RBP11.95□□□□□ -0.5
UBXN11-213ENST00000472155 PRR31Q5SQ13 230 aa11.95□□□□□ -0.5
UBXN11-213ENST00000472155 MRPL32Q9BYC8 188 aaKnown RBP11.95□□□□□ -0.5
UBXN11-213ENST00000472155 IL36BQ9NZH7 164 aa11.95□□□□□ -0.5
UBXN11-213ENST00000472155 A0A1W2PRE2 83 aa11.94□□□□□ -0.5
UBXN11-213ENST00000472155 C19orf84I3L1E1 186 aa11.94□□□□□ -0.5
UBXN11-213ENST00000472155 SSX2Q16385 188 aa11.94□□□□□ -0.5
UBXN11-213ENST00000472155 C9orf152Q5JTZ5 239 aa11.94□□□□□ -0.5
UBXN11-213ENST00000472155 PVRIGQ6DKI7 326 aa11.94□□□□□ -0.5
UBXN11-213ENST00000472155 ZNF329Q86UD4 541 aa11.94□□□□□ -0.5
UBXN11-213ENST00000472155 KIR3DL3Q8N743 410 aa11.94□□□□□ -0.5
UBXN11-213ENST00000472155 CFHR4Q92496 578 aa11.94□□□□□ -0.5
UBXN11-213ENST00000472155 C19orf24Q9BVV8 132 aa11.94□□□□□ -0.5
UBXN11-213ENST00000472155 SSBP3Q9BWW4 388 aaPredicted RBP11.94□□□□□ -0.5
UBXN11-213ENST00000472155 PRDM13Q9H4Q3 707 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms