RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 ZNF343Q6P1L6 599 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 PLET1Q6UQ28 207 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 FAM223AQ8IWN6 122 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 C12orf45Q8N5I9 185 aaPredicted RBP5.14□□□□□ -1.59
SCN9A-206ENST00000472119 OR52E5Q8NH55 327 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 ZNF431Q8TF32 576 aaPredicted RBP5.14□□□□□ -1.59
SCN9A-206ENST00000472119 OR10C1Q96KK4 312 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 MARVELD1Q9BSK0 173 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 MAGT1Q9H0U3 335 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 RBKSQ9H477 322 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 PEF1Q9UBV8 284 aaKnown RBP5.14□□□□□ -1.59
SCN9A-206ENST00000472119 MGAM2Q2M2H8 2515 aa5.14□□□□□ -1.59
SCN9A-206ENST00000472119 CMYA5Q8N3K9 4069 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.13□□□□□ -1.59
SCN9A-206ENST00000472119 FAM25EA8MYX2 175 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 PPP5D1E7EU14 171 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 LINC01619G3V211 115 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 CYB5BO43169 146 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 IGHV3-48P01763 117 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 IL5P05113 134 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 RNASE2P10153 161 aaKnown RBP5.13□□□□□ -1.59
SCN9A-206ENST00000472119 SLC25A6P12236 298 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 ZNF616Q08AN1 781 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 KLK9Q2XQG4 91 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 PDLIM3Q53GG5 364 aaPredicted RBP5.13□□□□□ -1.59
SCN9A-206ENST00000472119 CLEC19AQ6UXS0 136 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 WFDC9Q8NEX5 89 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 OR1P1Q8NH06 330 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 EEF1AKMT3Q96AZ1 226 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 PINX1Q96BK5 328 aaKnown RBP5.13□□□□□ -1.59
SCN9A-206ENST00000472119 PRR25Q96S07 402 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 RANGRFQ9HD47 186 aaPredicted RBP5.13□□□□□ -1.59
SCN9A-206ENST00000472119 ZC4H2Q9NQZ6 224 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 THYN1Q9P016 225 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 GSKIPQ9P0R6 139 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 HSPB7Q9UBY9 170 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 KLK9Q9UKQ9 250 aa5.13□□□□□ -1.59
SCN9A-206ENST00000472119 C5orf51A6NDU8 294 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 INS-IGF2F8WCM5 200 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 I3L2K1 104 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 K7EIM0 57 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 BMPR1BO00238 502 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 SYNGR2O43760 224 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 OR2C1O95371 312 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 MT-CO2P00403 227 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 IFNA10P01566 189 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 CLEC3BP05452 202 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 OR8U8P0C7N1 319 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 IAPPP10997 89 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 IGLL1P15814 213 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 HOXD3P31249 432 aaPredicted RBP5.12□□□□□ -1.59
SCN9A-206ENST00000472119 GPR183P32249 361 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 NKX2-1P43699 371 aaPredicted RBP5.12□□□□□ -1.59
SCN9A-206ENST00000472119 SUB1P53999 127 aaKnown RBP eCLIP5.12□□□□□ -1.59
SCN9A-206ENST00000472119 DCTN2Q13561 401 aaKnown RBP5.12□□□□□ -1.59
SCN9A-206ENST00000472119 IAH1Q2TAA2 248 aaPredicted RBP5.12□□□□□ -1.59
SCN9A-206ENST00000472119 ZNF114Q8NC26 417 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 OR1L6Q8NGR2 347 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 ZNF502Q8TBZ5 544 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 VN1R17PQ8TDU5 208 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 DTD1Q8TEA8 209 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 TMEM170AQ8WVE7 144 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 DCUN1D4Q92564 292 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 DLX4Q92988 240 aaPredicted RBP5.12□□□□□ -1.59
SCN9A-206ENST00000472119 CXorf58Q96LI9 332 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 GPN1Q9HCN4 374 aaPredicted RBP5.12□□□□□ -1.59
SCN9A-206ENST00000472119 PALMDQ9NP74 551 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 CACFD1Q9UGQ2 172 aa5.12□□□□□ -1.59
SCN9A-206ENST00000472119 TRBV7-1A0A0A6YYK4 115 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 IGHV3-35A0A0C4DH35 117 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 OR2T8A6NH00 312 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 SNRPGP15A8MWD9 76 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 FAM90A26D6RGX4 464 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 G3V4G9 280 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 WRBO00258 174 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 SSSCA1O60232 199 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 PRAF2O60831 178 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 SIX6O95475 246 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 SCGB1D2O95969 90 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 PTTG1O95997 202 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 NPY1RP25929 384 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 ARL3P36405 182 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 HTR2BP41595 481 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 SYNJ2BPP57105 145 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 POLR2GP62487 172 aaKnown RBP eCLIP5.11□□□□□ -1.59
SCN9A-206ENST00000472119 RPL36AP83881 106 aaKnown RBP5.11□□□□□ -1.59
SCN9A-206ENST00000472119 RGS21Q2M5E4 152 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 RPEL1Q2QD12 228 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 BSXQ3C1V8 233 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 C2orf83Q53S99 150 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 Q56UQ5 140 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 PVRIGQ6DKI7 326 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 UBAC2Q8NBM4 344 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 SLC24A4Q8NFF2 622 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 OR4D5Q8NGN0 318 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 FNDC4Q9H6D8 234 aaPredicted RBP5.11□□□□□ -1.59
SCN9A-206ENST00000472119 C21orf62Q9NYP8 219 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 PAIP2BQ9ULR5 123 aaKnown RBP5.11□□□□□ -1.59
SCN9A-206ENST00000472119 U3KQ87 197 aa5.11□□□□□ -1.59
SCN9A-206ENST00000472119 SEC14L6B5MCN3 397 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms