RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 RNASEH2CQ8TDP1 164 aaKnown RBP16.49■□□□□ 0.23
C9orf3-213ENST00000471978 GRAMD2BQ96HH9 432 aa16.49■□□□□ 0.23
C9orf3-213ENST00000471978 C11orf68Q9H3H3 251 aaKnown RBP16.49■□□□□ 0.23
C9orf3-213ENST00000471978 CCDC59Q9P031 241 aaKnown RBP16.49■□□□□ 0.23
C9orf3-213ENST00000471978 TMEM56-RWDD3S4R434 201 aa16.49■□□□□ 0.23
C9orf3-213ENST00000471978 K7EQG2 157 aa16.48■□□□□ 0.23
C9orf3-213ENST00000471978 IGLC1P0CG04 106 aa16.48■□□□□ 0.23
C9orf3-213ENST00000471978 SLC25A4P12235 298 aa16.48■□□□□ 0.23
C9orf3-213ENST00000471978 RND2P52198 227 aa16.48■□□□□ 0.23
C9orf3-213ENST00000471978 RBMS2Q15434 407 aaKnown RBP16.48■□□□□ 0.23
C9orf3-213ENST00000471978 ANKRD20A5PA0PJZ0 165 aa16.47■□□□□ 0.23
C9orf3-213ENST00000471978 NXPH3O95157 252 aa16.47■□□□□ 0.23
C9orf3-213ENST00000471978 OR10J1P30954 320 aa16.47■□□□□ 0.23
C9orf3-213ENST00000471978 NANOS2P60321 138 aaKnown RBP16.47■□□□□ 0.23
C9orf3-213ENST00000471978 C11orf45Q8TAV5 145 aa16.47■□□□□ 0.23
C9orf3-213ENST00000471978 Q8WTZ3 238 aa16.47■□□□□ 0.23
C9orf3-213ENST00000471978 KCNIP3Q9Y2W7 256 aa16.47■□□□□ 0.23
C9orf3-213ENST00000471978 GSTZ1O43708 216 aaPredicted RBP16.46■□□□□ 0.23
C9orf3-213ENST00000471978 SULT1A3P0DMM9 295 aa16.46■□□□□ 0.23
C9orf3-213ENST00000471978 SULT1A4P0DMN0 295 aa16.46■□□□□ 0.23
C9orf3-213ENST00000471978 TMBIM6P55061 237 aa16.46■□□□□ 0.23
C9orf3-213ENST00000471978 YPEL3P61236 119 aaPredicted RBP16.46■□□□□ 0.23
C9orf3-213ENST00000471978 DCANP1Q8TF63 244 aa16.46■□□□□ 0.23
C9orf3-213ENST00000471978 TMEM170AQ8WVE7 144 aa16.46■□□□□ 0.23
C9orf3-213ENST00000471978 IL22RA2Q969J5 263 aa16.46■□□□□ 0.23
C9orf3-213ENST00000471978 BCL7BQ9BQE9 202 aa16.46■□□□□ 0.23
C9orf3-213ENST00000471978 MFFQ9GZY8 342 aa16.46■□□□□ 0.23
C9orf3-213ENST00000471978 PRR13Q9NZ81 148 aa16.46■□□□□ 0.23
C9orf3-213ENST00000471978 FBXL17Q9UF56 701 aa16.46■□□□□ 0.23
C9orf3-213ENST00000471978 CACFD1Q9UGQ2 172 aa16.46■□□□□ 0.23
C9orf3-213ENST00000471978 RSL24D1Q9UHA3 163 aaKnown RBP16.46■□□□□ 0.23
C9orf3-213ENST00000471978 SCP2D1Q9UJQ7 156 aa16.46■□□□□ 0.23
C9orf3-213ENST00000471978 KMT2AQ03164 3969 aa16.46■□□□□ 0.23
C9orf3-213ENST00000471978 DEFB4AO15263 64 aa16.45■□□□□ 0.22
C9orf3-213ENST00000471978 ZNF688P0C7X2 276 aa16.45■□□□□ 0.22
C9orf3-213ENST00000471978 NPY1RP25929 384 aa16.45■□□□□ 0.22
C9orf3-213ENST00000471978 EIF2B2P49770 351 aaKnown RBP16.45■□□□□ 0.22
C9orf3-213ENST00000471978 ETFRF1Q6IPR1 90 aa16.45■□□□□ 0.22
C9orf3-213ENST00000471978 SCGB3A2Q96PL1 93 aa16.45■□□□□ 0.22
C9orf3-213ENST00000471978 U3KQE9 123 aa16.45■□□□□ 0.22
C9orf3-213ENST00000471978 HELTA6NFD8 242 aa16.44■□□□□ 0.22
C9orf3-213ENST00000471978 HNRNPCP07910 306 aaKnown RBP eCLIP16.44■□□□□ 0.225e-8■■□□□ 13.5
C9orf3-213ENST00000471978 NMSQ5H8A3 153 aa16.44■□□□□ 0.22
C9orf3-213ENST00000471978 TRPT1Q86TN4 253 aaKnown RBP16.44■□□□□ 0.22
C9orf3-213ENST00000471978 NOXA1Q86UR1 476 aa16.44■□□□□ 0.22
C9orf3-213ENST00000471978 MCUBQ9NWR8 336 aa16.44■□□□□ 0.22
C9orf3-213ENST00000471978 FRAS1Q86XX4 4008 aa16.43■□□□□ 0.22
C9orf3-213ENST00000471978 KNCNA6PVL3 124 aa16.43■□□□□ 0.22
C9orf3-213ENST00000471978 IFNA4P05014 189 aa16.43■□□□□ 0.22
C9orf3-213ENST00000471978 DHRS2Q13268 280 aa16.43■□□□□ 0.22
C9orf3-213ENST00000471978 C16orf54Q6UWD8 224 aa16.43■□□□□ 0.22
C9orf3-213ENST00000471978 NPIPB3Q92617 1050 aa16.43■□□□□ 0.22
C9orf3-213ENST00000471978 ACY3Q96HD9 319 aa16.43■□□□□ 0.22
C9orf3-213ENST00000471978 IFNA10P01566 189 aa16.42■□□□□ 0.22
C9orf3-213ENST00000471978 IL4P05112 153 aa16.42■□□□□ 0.22
C9orf3-213ENST00000471978 GIG44P09565 113 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-213ENST00000471978 SPP1P10451 314 aa16.42■□□□□ 0.22
C9orf3-213ENST00000471978 AKR1C4P17516 323 aa16.42■□□□□ 0.22
C9orf3-213ENST00000471978 ACTL10Q5JWF8 245 aa16.42■□□□□ 0.22
C9orf3-213ENST00000471978 MORN3Q6PF18 240 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-213ENST00000471978 GLMPQ8WWB7 406 aa16.42■□□□□ 0.22
C9orf3-213ENST00000471978 SLIRPQ9GZT3 109 aaKnown RBP16.42■□□□□ 0.22
C9orf3-213ENST00000471978 A0A0B4J2A0 478 aa16.41■□□□□ 0.22
C9orf3-213ENST00000471978 FABP12A6NFH5 140 aa16.41■□□□□ 0.22
C9orf3-213ENST00000471978 NOL3O60936 208 aaKnown RBP16.41■□□□□ 0.22
C9orf3-213ENST00000471978 RD3LP0DJH9 198 aa16.41■□□□□ 0.22
C9orf3-213ENST00000471978 TNFSF8P32971 234 aa16.41■□□□□ 0.22
C9orf3-213ENST00000471978 CCR6P51684 374 aa16.41■□□□□ 0.22
C9orf3-213ENST00000471978 AP2S1P53680 142 aaPredicted RBP16.41■□□□□ 0.22
C9orf3-213ENST00000471978 SUPT4H1P63272 117 aaKnown RBP16.41■□□□□ 0.22
C9orf3-213ENST00000471978 SMCO1Q147U7 214 aa16.41■□□□□ 0.22
C9orf3-213ENST00000471978 USF2Q15853 346 aaPredicted RBP16.41■□□□□ 0.22
C9orf3-213ENST00000471978 TMEM41BQ5BJD5 291 aa16.41■□□□□ 0.22
C9orf3-213ENST00000471978 LYZL2Q7Z4W2 148 aa16.41■□□□□ 0.22
C9orf3-213ENST00000471978 HSPB7Q9UBY9 170 aa16.41■□□□□ 0.22
C9orf3-213ENST00000471978 SHPKQ9UHJ6 478 aa16.41■□□□□ 0.22
C9orf3-213ENST00000471978 U3KQ87 197 aa16.41■□□□□ 0.22
C9orf3-213ENST00000471978 AGRNO00468 2067 aa16.41■□□□□ 0.22
C9orf3-213ENST00000471978 TOMM40O96008 361 aa16.4■□□□□ 0.22
C9orf3-213ENST00000471978 PSMG4Q5JS54 123 aa16.4■□□□□ 0.22
C9orf3-213ENST00000471978 LGALS9CQ6DKI2 356 aa16.4■□□□□ 0.22
C9orf3-213ENST00000471978 LGI3Q8N145 548 aa16.4■□□□□ 0.22
C9orf3-213ENST00000471978 RPP25LQ8N5L8 163 aaKnown RBP16.4■□□□□ 0.22
C9orf3-213ENST00000471978 DTD1Q8TEA8 209 aa16.4■□□□□ 0.22
C9orf3-213ENST00000471978 SOSTQ9BQB4 213 aa16.4■□□□□ 0.22
C9orf3-213ENST00000471978 RBKSQ9H477 322 aa16.4■□□□□ 0.22
C9orf3-213ENST00000471978 H3BMQ9 156 aa16.39■□□□□ 0.21
C9orf3-213ENST00000471978 ANXA3P12429 323 aa16.39■□□□□ 0.21
C9orf3-213ENST00000471978 C4BPBP20851 252 aa16.39■□□□□ 0.21
C9orf3-213ENST00000471978 Q8NAQ8 132 aa16.39■□□□□ 0.21
C9orf3-213ENST00000471978 SRPXP78539 464 aa16.38■□□□□ 0.21
C9orf3-213ENST00000471978 MCFD2Q8NI22 146 aa16.38■□□□□ 0.21
C9orf3-213ENST00000471978 C2CD4CQ8TF44 421 aa16.38■□□□□ 0.21
C9orf3-213ENST00000471978 RAB40CQ96S21 281 aa16.38■□□□□ 0.21
C9orf3-213ENST00000471978 VPS13DQ5THJ4 4388 aa16.38■□□□□ 0.21
C9orf3-213ENST00000471978 IGHV4-28A0A0C4DH34 117 aa16.37■□□□□ 0.21
C9orf3-213ENST00000471978 BUB3O43684 328 aa16.37■□□□□ 0.21
C9orf3-213ENST00000471978 RBMY1A1P0DJD3 496 aaKnown RBP16.37■□□□□ 0.21
C9orf3-213ENST00000471978 RBMY1CP0DJD4 496 aa16.37■□□□□ 0.21
C9orf3-213ENST00000471978 PSG1P11464 419 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms