RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 X6R8D5 127 aa5.86□□□□□ -1.47
USP48-207ENST00000471752 IGHV4-28A0A0C4DH34 117 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 GABARAPH6UMI1 98 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 RGS5O15539 181 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 IGLC1P0CG04 106 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 NPPCP23582 126 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 OPRK1P41145 380 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 P2RY1P47900 373 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 RND2P52198 227 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 TAS2R19P59542 299 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 SPCS3P61009 180 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 TMEM268Q5VZI3 342 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 TRPT1Q86TN4 253 aaKnown RBP5.85□□□□□ -1.47
USP48-207ENST00000471752 CLVS1Q8IUQ0 354 aaPredicted RBP5.85□□□□□ -1.47
USP48-207ENST00000471752 FAM219AQ8IW50 185 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 Q8NAQ8 132 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 CSNK1G2-AS1Q8NCQ2 148 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 ZFAND1Q8TCF1 268 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 DYNC2LI1Q8TCX1 351 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 NPIPB3Q92617 1050 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 C17orf77Q96MU5 243 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 SOSTQ9BQB4 213 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 HEYLQ9NQ87 328 aaPredicted RBP5.85□□□□□ -1.47
USP48-207ENST00000471752 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.85□□□□□ -1.47
USP48-207ENST00000471752 CELA1Q9UNI1 258 aa5.85□□□□□ -1.47
USP48-207ENST00000471752 IGKV1D-37A0A075B6S9 117 aa5.84□□□□□ -1.47
USP48-207ENST00000471752 NUPR2A6NF83 97 aa5.84□□□□□ -1.47
USP48-207ENST00000471752 CRYM-AS1A6NIL9 109 aa5.84□□□□□ -1.47
USP48-207ENST00000471752 PRB4P10163 310 aaPredicted RBP5.84□□□□□ -1.47
USP48-207ENST00000471752 S100GP29377 79 aa5.84□□□□□ -1.47
USP48-207ENST00000471752 RPL5P46777 297 aaKnown RBP5.84□□□□□ -1.47
USP48-207ENST00000471752 ZNF90Q03938 601 aa5.84□□□□□ -1.47
USP48-207ENST00000471752 ACTL10Q5JWF8 245 aa5.84□□□□□ -1.47
USP48-207ENST00000471752 GDF5OSQ5U4N7 250 aa5.84□□□□□ -1.47
USP48-207ENST00000471752 C16orf54Q6UWD8 224 aa5.84□□□□□ -1.47
USP48-207ENST00000471752 C11orf45Q8TAV5 145 aa5.84□□□□□ -1.47
USP48-207ENST00000471752 SMIM4Q8WVI0 70 aa5.84□□□□□ -1.47
USP48-207ENST00000471752 GLMPQ8WWB7 406 aa5.84□□□□□ -1.47
USP48-207ENST00000471752 RRNAD1Q96FB5 475 aaKnown RBP5.84□□□□□ -1.47
USP48-207ENST00000471752 ACY3Q96HD9 319 aa5.84□□□□□ -1.47
USP48-207ENST00000471752 DIRAS2Q96HU8 199 aa5.84□□□□□ -1.47
USP48-207ENST00000471752 RAB40CQ96S21 281 aa5.84□□□□□ -1.47
USP48-207ENST00000471752 RBKSQ9H477 322 aa5.84□□□□□ -1.47
USP48-207ENST00000471752 APLNQ9ULZ1 77 aa5.84□□□□□ -1.47
USP48-207ENST00000471752 TMEM56-RWDD3S4R434 201 aa5.84□□□□□ -1.47
USP48-207ENST00000471752 LRP1BQ9NZR2 4599 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 ANKRD20A5PA0PJZ0 165 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 CEBPZOSA8MTT3 80 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 PRM2P04554 102 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 AKR1C4P17516 323 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 ATF4P18848 351 aaPredicted RBP5.83□□□□□ -1.48
USP48-207ENST00000471752 HLA-DMBP28068 263 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 OR10J1P30954 320 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 TNFSF8P32971 234 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 FXYD7P58549 80 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 DHRS2Q13268 280 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 IL18Q14116 193 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 C2orf83Q53S99 150 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 NMSQ5H8A3 153 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 PSMG4Q5JS54 123 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 TMEM182Q6ZP80 229 aaPredicted RBP5.83□□□□□ -1.48
USP48-207ENST00000471752 Q6ZTC4 211 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 GPR141Q7Z602 305 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 CCDC71LQ8N9Z2 235 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 OR51G1Q8NGK1 321 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 OR52E5Q8NH55 327 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 RNASE11Q8TAA1 199 aaKnown RBP5.83□□□□□ -1.48
USP48-207ENST00000471752 GATAD1Q8WUU5 269 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 RBPMSQ93062 196 aaKnown RBP5.83□□□□□ -1.48
USP48-207ENST00000471752 METTL26Q96S19 204 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 GINS3Q9BRX5 216 aa5.83□□□□□ -1.48
USP48-207ENST00000471752 WDR12Q9GZL7 423 aaKnown RBP5.83□□□□□ -1.48
USP48-207ENST00000471752 SLIRPQ9GZT3 109 aaKnown RBP5.83□□□□□ -1.48
USP48-207ENST00000471752 IGLL5B9A064 214 aa5.82□□□□□ -1.48
USP48-207ENST00000471752 DISC1C4P0D8 188 aa5.82□□□□□ -1.48
USP48-207ENST00000471752 IL4P05112 153 aa5.82□□□□□ -1.48
USP48-207ENST00000471752 AKAIN1P0CW23 69 aa5.82□□□□□ -1.48
USP48-207ENST00000471752 PSG1P11464 419 aa5.82□□□□□ -1.48
USP48-207ENST00000471752 TBPP20226 339 aa5.82□□□□□ -1.48
USP48-207ENST00000471752 HTR2BP41595 481 aa5.82□□□□□ -1.48
USP48-207ENST00000471752 SUB1P53999 127 aaKnown RBP eCLIP5.82□□□□□ -1.48
USP48-207ENST00000471752 PAFAH1B2P68402 229 aa5.82□□□□□ -1.48
USP48-207ENST00000471752 C12orf74Q32Q52 190 aa5.82□□□□□ -1.48
USP48-207ENST00000471752 LGALS9CQ6DKI2 356 aa5.82□□□□□ -1.48
USP48-207ENST00000471752 STHQ8IWL8 128 aa5.82□□□□□ -1.48
USP48-207ENST00000471752 AP3S1Q92572 193 aa5.82□□□□□ -1.48
USP48-207ENST00000471752 PDCD10Q9BUL8 212 aa5.82□□□□□ -1.48
USP48-207ENST00000471752 MRPS26Q9BYN8 205 aaKnown RBP5.82□□□□□ -1.48
USP48-207ENST00000471752 C11orf68Q9H3H3 251 aaKnown RBP5.82□□□□□ -1.48
USP48-207ENST00000471752 ENY2Q9NPA8 101 aa5.82□□□□□ -1.48
USP48-207ENST00000471752 XCL2Q9UBD3 114 aa5.82□□□□□ -1.48
USP48-207ENST00000471752 C14orf166Q9Y224 244 aaKnown RBP5.82□□□□□ -1.48
USP48-207ENST00000471752 KLK5Q9Y337 293 aaPredicted RBP5.82□□□□□ -1.48
USP48-207ENST00000471752 IGKV1OR2-108A0A075B7D4 117 aa5.81□□□□□ -1.48
USP48-207ENST00000471752 ZNF705EA8MWA4 302 aaPredicted RBP5.81□□□□□ -1.48
USP48-207ENST00000471752 FAM90A26D6RGX4 464 aa5.81□□□□□ -1.48
USP48-207ENST00000471752 F6UB75 175 aa5.81□□□□□ -1.48
USP48-207ENST00000471752 H3BMQ9 156 aa5.81□□□□□ -1.48
USP48-207ENST00000471752 CTDSPLO15194 276 aa5.81□□□□□ -1.48
USP48-207ENST00000471752 BUB3O43684 328 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms