RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 NPBQ8NG41 125 aa8.51□□□□□ -1.05
APLF-204ENST00000471727 SRSF12Q8WXF0 261 aaKnown RBP8.51□□□□□ -1.05
APLF-204ENST00000471727 FXYD5Q96DB9 178 aa8.51□□□□□ -1.05
APLF-204ENST00000471727 RNF24Q9Y225 148 aa8.51□□□□□ -1.05
APLF-204ENST00000471727 LINC00587B1AMM8 73 aa8.5□□□□□ -1.05
APLF-204ENST00000471727 PEX7O00628 323 aa8.5□□□□□ -1.05
APLF-204ENST00000471727 REG1AP05451 166 aa8.5□□□□□ -1.05
APLF-204ENST00000471727 MYCNOSP40205 109 aa8.5□□□□□ -1.05
APLF-204ENST00000471727 GPR6P46095 362 aaPredicted RBP8.5□□□□□ -1.05
APLF-204ENST00000471727 PAFAH1B2P68402 229 aa8.5□□□□□ -1.05
APLF-204ENST00000471727 SSBP2P81877 361 aaPredicted RBP8.5□□□□□ -1.05
APLF-204ENST00000471727 PLGLAQ15195 96 aa8.5□□□□□ -1.05
APLF-204ENST00000471727 IBA57Q5T440 356 aaKnown RBP8.5□□□□□ -1.05
APLF-204ENST00000471727 RASL11AQ6T310 242 aa8.5□□□□□ -1.05
APLF-204ENST00000471727 ZNF329Q86UD4 541 aa8.5□□□□□ -1.05
APLF-204ENST00000471727 GBGT1Q8N5D6 347 aa8.5□□□□□ -1.05
APLF-204ENST00000471727 RBM14Q96PK6 669 aaKnown RBP8.5□□□□□ -1.05
APLF-204ENST00000471727 SSBP3Q9BWW4 388 aaPredicted RBP8.5□□□□□ -1.05
APLF-204ENST00000471727 FBXL15Q9H469 300 aa8.5□□□□□ -1.05
APLF-204ENST00000471727 ARFGEF3Q5TH69 2177 aa8.5□□□□□ -1.05
APLF-204ENST00000471727 TNCP24821 2201 aa8.49□□□□□ -1.05
APLF-204ENST00000471727 CFAP47Q6ZTR5 3102 aa8.49□□□□□ -1.05
APLF-204ENST00000471727 POLEQ07864 2286 aa8.49□□□□□ -1.05
APLF-204ENST00000471727 SMIM27A0A1W2PRY6 76 aa8.49□□□□□ -1.05
APLF-204ENST00000471727 C22orf46C9J442 243 aa8.49□□□□□ -1.05
APLF-204ENST00000471727 SLC17A3O00476 420 aa8.49□□□□□ -1.05
APLF-204ENST00000471727 NDUFA3O95167 84 aa8.49□□□□□ -1.05
APLF-204ENST00000471727 MOSP00540 346 aa8.49□□□□□ -1.05
APLF-204ENST00000471727 IGLV2-8P01709 118 aa8.49□□□□□ -1.05
APLF-204ENST00000471727 CNTFRP26992 372 aa8.49□□□□□ -1.05
APLF-204ENST00000471727 MFAP2P55001 183 aa8.49□□□□□ -1.05
APLF-204ENST00000471727 PKIAP61925 76 aa8.49□□□□□ -1.05
APLF-204ENST00000471727 OR5I1Q13606 314 aa8.49□□□□□ -1.05
APLF-204ENST00000471727 TMEM183BQ1AE95 376 aa8.49□□□□□ -1.05
APLF-204ENST00000471727 OR1B1Q8NGR6 318 aa8.49□□□□□ -1.05
APLF-204ENST00000471727 MRPL18Q9H0U6 180 aaKnown RBP8.49□□□□□ -1.05
APLF-204ENST00000471727 MRPL36Q9P0J6 103 aaKnown RBP8.49□□□□□ -1.05
APLF-204ENST00000471727 TMEM14CQ9P0S9 112 aa8.49□□□□□ -1.05
APLF-204ENST00000471727 MGAQ8IWI9 3026 aa8.49□□□□□ -1.05
APLF-204ENST00000471727 PTPRQQ9UMZ3 2332 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 ODF3BA8MYP8 253 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 TSTD3H0UI37 97 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 FCN1O00602 326 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 TIMM23O14925 209 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 NBR2O15453 112 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 CNIH1O95406 144 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 NBEAP1P0C6P0 100 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 PYYP10082 97 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 ESDP10768 282 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 ORM2P19652 201 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 ADMP35318 185 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 Q0VG73 95 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 MINOS1Q5TGZ0 78 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 MORN5Q5VZ52 161 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 BAGE2Q86Y30 109 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 EPDR1Q9UM22 224 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 HIGD1AQ9Y241 93 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 KLF12Q9Y4X4 402 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 MINOS1-NBL1R4GNA1 71 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 ASPMQ8IZT6 3477 aa8.48□□□□□ -1.05
APLF-204ENST00000471727 TRAV30A0A087WSZ9 112 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 IZUMO1RA6ND01 250 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 I3L2K1 104 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 GATCO43716 136 aaKnown RBP8.47□□□□□ -1.05
APLF-204ENST00000471727 HLA-DQA1P01909 254 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 HIST1H1EP10412 219 aaKnown RBP8.47□□□□□ -1.05
APLF-204ENST00000471727 MGST1P10620 155 aaKnown RBP8.47□□□□□ -1.05
APLF-204ENST00000471727 CRISP2P16562 243 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 UBE2G1P62253 170 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 ARF6P62330 175 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 RANP62826 216 aaKnown RBP8.47□□□□□ -1.05
APLF-204ENST00000471727 MMDQ15546 238 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 OR8I2Q8N0Y5 310 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 C5orf17Q8NAS9 161 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 CFHR4Q92496 578 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 GRAMD2BQ96HH9 432 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 TMEM68Q96MH6 324 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 WNT10AQ9GZT5 417 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 PRDM13Q9H4Q3 707 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 ROS1P08922 2347 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 PGPA6NDG6 321 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 ZNF705GA8MUZ8 300 aaPredicted RBP8.47□□□□□ -1.05
APLF-204ENST00000471727 SNURFLB1AK76 121 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 AMY1AP04745 511 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 SLC25A5P05141 298 aaKnown RBP8.47□□□□□ -1.05
APLF-204ENST00000471727 IGLC1P0CG04 106 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 GZMBP10144 247 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 IQCJQ1A5X6 159 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 FMC1Q96HJ9 113 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 RASL11BQ9BPW5 248 aa8.47□□□□□ -1.05
APLF-204ENST00000471727 RNASE7Q9H1E1 156 aaKnown RBP8.47□□□□□ -1.05
APLF-204ENST00000471727 BSNQ9UPA5 3926 aa8.46□□□□□ -1.05
APLF-204ENST00000471727 PCNX1Q96RV3 2341 aa8.46□□□□□ -1.06
APLF-204ENST00000471727 SCGB2A1O75556 95 aa8.46□□□□□ -1.06
APLF-204ENST00000471727 IGHV3-48P01763 117 aa8.46□□□□□ -1.06
APLF-204ENST00000471727 GP9P14770 177 aa8.46□□□□□ -1.06
APLF-204ENST00000471727 IER3P46695 156 aa8.46□□□□□ -1.06
APLF-204ENST00000471727 TPPP2P59282 170 aa8.46□□□□□ -1.06
APLF-204ENST00000471727 OR10J3Q5JRS4 329 aa8.46□□□□□ -1.06
APLF-204ENST00000471727 CMTM2Q8TAZ6 248 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms