RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 PINX1Q96BK5 328 aaKnown RBP7.56□□□□□ -1.2
SF3A1-207ENST00000471342 DUX3Q96PT4 197 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 TXN2Q99757 166 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 ATP5SQ99766 215 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 TMEM147Q9BVK8 224 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 GGTLC1Q9BX51 225 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 SMIM3Q9BZL3 60 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 ENY2Q9NPA8 101 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 U3KQE9 123 aa7.56□□□□□ -1.2
SF3A1-207ENST00000471342 TRBV7-1A0A0A6YYK4 115 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 SCAF4O95104 1147 aaKnown RBP7.55□□□□□ -1.2
SF3A1-207ENST00000471342 PET100P0DJ07 73 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 DEFA4P12838 97 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 PVALBP20472 110 aaPredicted RBP7.55□□□□□ -1.2
SF3A1-207ENST00000471342 OPRK1P41145 380 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 AP2S1P53680 142 aaPredicted RBP7.55□□□□□ -1.2
SF3A1-207ENST00000471342 SUB1P53999 127 aaKnown RBP eCLIP7.55□□□□□ -1.2
SF3A1-207ENST00000471342 IFITM2Q01629 132 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 CLINT1Q14677 625 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 OPCMLQ14982 345 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 ATP6V1FQ16864 119 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 MORN5Q5VZ52 161 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 C8orf86Q6ZUL3 223 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 LILRB2Q8N423 598 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 RCC1LQ96I51 464 aaKnown RBP7.55□□□□□ -1.2
SF3A1-207ENST00000471342 OR5B12Q96R08 314 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 TRGV9Q99603 122 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 GINS3Q9BRX5 216 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 GON7Q9BXV9 100 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 SLC25A31Q9H0C2 315 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 NPVFQ9HCQ7 196 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 ZC4H2Q9NQZ6 224 aa7.55□□□□□ -1.2
SF3A1-207ENST00000471342 A0A0D9SG52 128 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 OR2T8A6NH00 312 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 TGOLN2O43493 480 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 BCL2L11O43521 198 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 PFDN1O60925 122 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 OR2C1O95371 312 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 OR10J1P30954 320 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 GPR183P32249 361 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 MFAP4P55083 255 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 PLP1P60201 277 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 YPEL3P61236 119 aaPredicted RBP7.54□□□□□ -1.2
SF3A1-207ENST00000471342 RAB11AP62491 216 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 RPP30P78346 268 aaKnown RBP7.54□□□□□ -1.2
SF3A1-207ENST00000471342 SLC35B1P78383 322 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 GCSAMLQ5JQS6 135 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 ACSM6Q6P461 480 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 TOMM20LQ6UXN7 152 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 UBAC2Q8NBM4 344 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 OR1S2Q8NGQ3 325 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 STOML3Q8TAV4 291 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 TMEM37Q8WXS4 190 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 CXorf58Q96LI9 332 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 RSG1Q9BU20 258 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 SH3BGRL3Q9H299 93 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 VSIRQ9H7M9 311 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 ZNF355PQ9NSJ1 428 aa7.54□□□□□ -1.2
SF3A1-207ENST00000471342 MRPL27Q9P0M9 148 aaKnown RBP7.54□□□□□ -1.2
SF3A1-207ENST00000471342 TCRBV4S1A1TA0A5B7 111 aa7.53□□□□□ -1.2
SF3A1-207ENST00000471342 ANKRD34BA5PLL1 514 aa7.53□□□□□ -1.2
SF3A1-207ENST00000471342 AGPAT2O15120 278 aa7.53□□□□□ -1.2
SF3A1-207ENST00000471342 APOHP02749 345 aaPredicted RBP7.53□□□□□ -1.2
SF3A1-207ENST00000471342 SPP1P10451 314 aa7.53□□□□□ -1.2
SF3A1-207ENST00000471342 PSG1P11464 419 aa7.53□□□□□ -1.2
SF3A1-207ENST00000471342 ATP6V0CP27449 155 aa7.53□□□□□ -1.2
SF3A1-207ENST00000471342 USF2Q15853 346 aaPredicted RBP7.53□□□□□ -1.2
SF3A1-207ENST00000471342 ZNF726P1Q15940 193 aa7.53□□□□□ -1.2
SF3A1-207ENST00000471342 BTNL8Q6UX41 500 aa7.53□□□□□ -1.2
SF3A1-207ENST00000471342 NDUFA11Q86Y39 141 aa7.53□□□□□ -1.2
SF3A1-207ENST00000471342 GPHB5Q86YW7 130 aa7.53□□□□□ -1.2
SF3A1-207ENST00000471342 MRPL41Q8IXM3 137 aaKnown RBP7.53□□□□□ -1.2
SF3A1-207ENST00000471342 EEF1AKMT3Q96AZ1 226 aa7.53□□□□□ -1.2
SF3A1-207ENST00000471342 ACY3Q96HD9 319 aa7.53□□□□□ -1.2
SF3A1-207ENST00000471342 NPCDR1Q9BY65 106 aa7.53□□□□□ -1.2
SF3A1-207ENST00000471342 UQCC1Q9NVA1 299 aa7.53□□□□□ -1.2
SF3A1-207ENST00000471342 PEF1Q9UBV8 284 aaKnown RBP7.53□□□□□ -1.2
SF3A1-207ENST00000471342 TSSC4Q9Y5U2 329 aaPredicted RBP7.53□□□□□ -1.2
SF3A1-207ENST00000471342 IGHV3-35A0A0C4DH35 117 aa7.52□□□□□ -1.21
SF3A1-207ENST00000471342 A0A0G2JLM5 398 aa7.52□□□□□ -1.21
SF3A1-207ENST00000471342 UBE2L5PA0A1B0GUS4 154 aa7.52□□□□□ -1.21
SF3A1-207ENST00000471342 MRPS12O15235 138 aaKnown RBP7.52□□□□□ -1.21
SF3A1-207ENST00000471342 TOMM40O96008 361 aa7.52□□□□□ -1.21
SF3A1-207ENST00000471342 HSPB1P04792 205 aaKnown RBP7.52□□□□□ -1.21
SF3A1-207ENST00000471342 C8orf88P0DMB2 117 aa7.52□□□□□ -1.21
SF3A1-207ENST00000471342 RPL29P47914 159 aaKnown RBP7.52□□□□□ -1.21
SF3A1-207ENST00000471342 SLURP1P55000 103 aa7.52□□□□□ -1.21
SF3A1-207ENST00000471342 MIC13Q5XKP0 118 aa7.52□□□□□ -1.21
SF3A1-207ENST00000471342 CYP2G1PQ6ZSU1 146 aa7.52□□□□□ -1.21
SF3A1-207ENST00000471342 SSX7Q7RTT5 188 aa7.52□□□□□ -1.21
SF3A1-207ENST00000471342 STX12Q86Y82 276 aa7.52□□□□□ -1.21
SF3A1-207ENST00000471342 DLX4Q92988 240 aaPredicted RBP7.52□□□□□ -1.21
SF3A1-207ENST00000471342 PPP1R14BQ96C90 147 aa7.52□□□□□ -1.21
SF3A1-207ENST00000471342 ZNF503Q96F45 646 aa7.52□□□□□ -1.21
SF3A1-207ENST00000471342 ARL6Q9H0F7 186 aa7.52□□□□□ -1.21
SF3A1-207ENST00000471342 THYN1Q9P016 225 aa7.52□□□□□ -1.21
SF3A1-207ENST00000471342 PAIP2BQ9ULR5 123 aaKnown RBP7.52□□□□□ -1.21
SF3A1-207ENST00000471342 RPS10-NUDT3A0A1W2PQS6 291 aa7.51□□□□□ -1.21
SF3A1-207ENST00000471342 TMEM213A2RRL7 107 aa7.51□□□□□ -1.21
SF3A1-207ENST00000471342 TAAR5O14804 337 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms