RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 VAX2Q9UIW0 290 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 IGKV1OR2-108A0A075B7D4 117 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 A0A0U1RQK1 487 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 NDUFS6O75380 124 aaKnown RBP13.82□□□□□ -0.2
HSPG2-208ENST00000471322 MT-CO2P00403 227 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 LINC00869P0C866 280 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 CTRB1P17538 263 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 PSMB3P49720 205 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 CX3CL1P78423 397 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 CTRB2Q6GPI1 263 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 NPIPB3Q92617 1050 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 ARPC1AQ92747 370 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 RASL11BQ9BPW5 248 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 MEGF9Q9H1U4 602 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 MANBALQ9NQG1 85 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 TNFRSF19Q9NS68 423 aa13.82□□□□□ -0.2
HSPG2-208ENST00000471322 ZFP92A6NM28 416 aa13.81□□□□□ -0.2
HSPG2-208ENST00000471322 HLA-DRB1P01911 266 aa13.81□□□□□ -0.2
HSPG2-208ENST00000471322 DEFA4P12838 97 aa13.81□□□□□ -0.2
HSPG2-208ENST00000471322 MFAP2P55001 183 aa13.81□□□□□ -0.2
HSPG2-208ENST00000471322 GCSAMLQ5JQS6 135 aa13.81□□□□□ -0.2
HSPG2-208ENST00000471322 SOHLH1Q5JUK2 328 aa13.81□□□□□ -0.2
HSPG2-208ENST00000471322 CYP2G1PQ6ZSU1 146 aa13.81□□□□□ -0.2
HSPG2-208ENST00000471322 TMEM116Q8NCL8 245 aa13.81□□□□□ -0.2
HSPG2-208ENST00000471322 RXFP4Q8TDU9 374 aa13.81□□□□□ -0.2
HSPG2-208ENST00000471322 MDFIQ99750 246 aa13.81□□□□□ -0.2
HSPG2-208ENST00000471322 WNT10AQ9GZT5 417 aa13.81□□□□□ -0.2
HSPG2-208ENST00000471322 NPIPB5A8MRT5 1133 aa13.8□□□□□ -0.2
HSPG2-208ENST00000471322 SRP19P09132 144 aaKnown RBP13.8□□□□□ -0.2
HSPG2-208ENST00000471322 APELAP0DMC3 54 aa13.8□□□□□ -0.2
HSPG2-208ENST00000471322 GUCA2BQ16661 112 aa13.8□□□□□ -0.2
HSPG2-208ENST00000471322 C9orf139Q6ZV77 190 aa13.8□□□□□ -0.2
HSPG2-208ENST00000471322 Q8N9W7 124 aa13.8□□□□□ -0.2
HSPG2-208ENST00000471322 RNF2Q99496 336 aa13.8□□□□□ -0.2
HSPG2-208ENST00000471322 SLC25A33Q9BSK2 321 aa13.8□□□□□ -0.2
HSPG2-208ENST00000471322 NKX6-2Q9C056 277 aaPredicted RBP13.8□□□□□ -0.2
HSPG2-208ENST00000471322 TCRBV4S1A1TA0A5B7 111 aa13.79□□□□□ -0.2
HSPG2-208ENST00000471322 CXorf1O96002 111 aa13.79□□□□□ -0.2
HSPG2-208ENST00000471322 RND2P52198 227 aa13.79□□□□□ -0.2
HSPG2-208ENST00000471322 HILS1P60008 231 aa13.79□□□□□ -0.2
HSPG2-208ENST00000471322 HMGB3O15347 200 aaKnown RBP13.79□□□□□ -0.2
HSPG2-208ENST00000471322 SCO1O75880 301 aa13.79□□□□□ -0.2
HSPG2-208ENST00000471322 STAG3L2P0CL84 134 aa13.79□□□□□ -0.2
HSPG2-208ENST00000471322 STAG3L3P0CL85 134 aa13.79□□□□□ -0.2
HSPG2-208ENST00000471322 BPIFB3P59826 476 aa13.79□□□□□ -0.2
HSPG2-208ENST00000471322 KRTAP24-1Q3LI83 254 aa13.79□□□□□ -0.2
HSPG2-208ENST00000471322 FBLN7Q53RD9 439 aa13.79□□□□□ -0.2
HSPG2-208ENST00000471322 TTC9CQ8N5M4 171 aa13.79□□□□□ -0.2
HSPG2-208ENST00000471322 TRGV9Q99603 122 aa13.79□□□□□ -0.2
HSPG2-208ENST00000471322 DNAJC9-AS1A6NH13 148 aa13.78□□□□□ -0.2
HSPG2-208ENST00000471322 HOXA3O43365 443 aaPredicted RBP13.78□□□□□ -0.2
HSPG2-208ENST00000471322 GATAD1Q8WUU5 269 aa13.78□□□□□ -0.2
HSPG2-208ENST00000471322 I3L2K1 104 aa13.77□□□□□ -0.21
HSPG2-208ENST00000471322 FBP1P09467 338 aa13.77□□□□□ -0.21
HSPG2-208ENST00000471322 IQCF2Q8IXL9 164 aa13.77□□□□□ -0.21
HSPG2-208ENST00000471322 OR1L4Q8NGR5 311 aa13.77□□□□□ -0.21
HSPG2-208ENST00000471322 TMEM68Q96MH6 324 aa13.77□□□□□ -0.21
HSPG2-208ENST00000471322 PFDN5Q99471 154 aa13.77□□□□□ -0.21
HSPG2-208ENST00000471322 FUT9Q9Y231 359 aa13.77□□□□□ -0.21
HSPG2-208ENST00000471322 IGHV7-81A0A0B4J1V7 117 aa13.76□□□□□ -0.21
HSPG2-208ENST00000471322 TAS2R45P59539 299 aa13.76□□□□□ -0.21
HSPG2-208ENST00000471322 MEF2BQ02080 365 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-208ENST00000471322 ATRAIDQ6UW56 229 aa13.76□□□□□ -0.21
HSPG2-208ENST00000471322 OR4X1Q8NH49 305 aa13.76□□□□□ -0.21
HSPG2-208ENST00000471322 RBM14Q96PK6 669 aaKnown RBP13.76□□□□□ -0.21
HSPG2-208ENST00000471322 TXNDC17Q9BRA2 123 aa13.76□□□□□ -0.21
HSPG2-208ENST00000471322 MRPL32Q9BYC8 188 aaKnown RBP13.76□□□□□ -0.21
HSPG2-208ENST00000471322 TMPRSS5Q9H3S3 457 aa13.76□□□□□ -0.21
HSPG2-208ENST00000471322 SEPSECSQ9HD40 501 aaKnown RBP13.76□□□□□ -0.21
HSPG2-208ENST00000471322 DNAJC4Q9NNZ3 241 aa13.76□□□□□ -0.21
HSPG2-208ENST00000471322 TECRQ9NZ01 308 aaKnown RBP13.76□□□□□ -0.21
HSPG2-208ENST00000471322 THYN1Q9P016 225 aa13.76□□□□□ -0.21
HSPG2-208ENST00000471322 DMRT1Q9Y5R6 373 aa13.76□□□□□ -0.21
HSPG2-208ENST00000471322 STAB1Q9NY15 2570 aa13.76□□□□□ -0.21
HSPG2-208ENST00000471322 TENM1Q9UKZ4 2725 aa13.76□□□□□ -0.21
HSPG2-208ENST00000471322 IGKV1D-37A0A075B6S9 117 aa13.75□□□□□ -0.21
HSPG2-208ENST00000471322 EIF3GO75821 320 aaKnown RBP eCLIP13.75□□□□□ -0.21
HSPG2-208ENST00000471322 FABP1P07148 127 aa13.75□□□□□ -0.21
HSPG2-208ENST00000471322 OR5G3P0C626 314 aa13.75□□□□□ -0.21
HSPG2-208ENST00000471322 KRTAP21-3Q3LHN1 58 aa13.75□□□□□ -0.21
HSPG2-208ENST00000471322 FAM78BQ5VT40 261 aa13.75□□□□□ -0.21
HSPG2-208ENST00000471322 CLRN3Q8NCR9 226 aa13.75□□□□□ -0.21
HSPG2-208ENST00000471322 SUN5Q8TC36 379 aa13.75□□□□□ -0.21
HSPG2-208ENST00000471322 FAM103A1Q9BTL3 118 aaKnown RBP13.75□□□□□ -0.21
HSPG2-208ENST00000471322 MRPL36Q9P0J6 103 aaKnown RBP13.75□□□□□ -0.21
HSPG2-208ENST00000471322 ELOA3CA0A087WX78 387 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-208ENST00000471322 IGHV3-48P01763 117 aa13.75□□□□□ -0.21
HSPG2-208ENST00000471322 IGHV4-59P01825 116 aa13.75□□□□□ -0.21
HSPG2-208ENST00000471322 ARL14EPLP0DKL9 152 aa13.75□□□□□ -0.21
HSPG2-208ENST00000471322 NDPQ00604 133 aa13.75□□□□□ -0.21
HSPG2-208ENST00000471322 BTN1A1Q13410 526 aa13.75□□□□□ -0.21
HSPG2-208ENST00000471322 C19orf35Q6ZS72 473 aa13.75□□□□□ -0.21
HSPG2-208ENST00000471322 CYB561D1Q8N8Q1 229 aa13.75□□□□□ -0.21
HSPG2-208ENST00000471322 JMJD8Q96S16 334 aa13.75□□□□□ -0.21
HSPG2-208ENST00000471322 MOB4Q9Y3A3 225 aa13.75□□□□□ -0.21
HSPG2-208ENST00000471322 PLXNB1O43157 2135 aa13.74□□□□□ -0.21
HSPG2-208ENST00000471322 TMEM250H0YL14 139 aa13.74□□□□□ -0.21
HSPG2-208ENST00000471322 COX7A2P2O60397 106 aa13.74□□□□□ -0.21
HSPG2-208ENST00000471322 CLN5O75503 358 aa13.74□□□□□ -0.21
HSPG2-208ENST00000471322 HIST1H1BP16401 226 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms